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The map label for this gene is ybdN [H]

Identifier: 150008245

GI number: 150008245

Start: 1888460

End: 1889761

Strand: Reverse

Name: ybdN [H]

Synonym: BDI_1611

Alternate gene names: 150008245

Gene position: 1889761-1888460 (Counterclockwise)

Preceding gene: 150008246

Following gene: 150008244

Centisome position: 39.28

GC content: 40.25

Gene sequence:

>1302_bases
ATGATGCGAAGAATGGATGTGTACGAGGCGACAGAGAAAAGATTGAAGATCATTTTTGATTATTTCGATTACGTATACGT
CTCTTTTTCCGGCGGAAAGGATAGTGGTGTACTGTTGAATTTGTGTGTAGATTATATTCGTAGATACGCTCCGGGACGAA
AATTAGGTGTATTTCATATGGATTATGAGGTTCAATACAGCCAGACGATCGAATATGTGGAAAAGGTTTATGCCGCTAAT
TCCGATATCCTTGATATTTATCATTGTTGTGTTCCTTTTAAAGTCCAGACATGTACATCTATGTTTCAACAATATTGGAG
ACCTTGGAGCGAGGAGTACCGGGATATCTGGGTTCGAGAGATGCCCCATTCATGTCTCCGGGCGAAAGACTTTGACTTTT
TCAAGGAGGACATGTGGGATTATGATTTTCAGAATATGTTCCCTTTTTGGTTGTATCAACGGAAAATGGGCCGGCGTATA
TGTTGCCTTGTTGGTATCCGTACCCAAGAGAGTTTTAATAGGTGGCGGGCCATACATAGTGATAAGAATTACAGAAAACT
AGCTAATTATAAATGGACTCGCAGAATGAATTATTCTATATATAACGCATATCCTATTTATGATTGGAAAACTCAGGATA
TCTGGATAGCGAACGGAAAGTTCGGTTGGACATATAATCATTTGTATGATTTGTATTATCAAGCAGGGGTGCCTTTGTCC
CGGCAACGTGTGGCGAGCCCATTCATATCCCAAGCGATATCCACACTGTTCATTTACAAAGTTGTCGATCCCGACATGTG
GGGGAGGATGGTTGGACGTGTAAACGGTGTTGGCTTTGCCGGTATATATGGGAATACCTCCGCTATGGGATGGAGGGCTA
TCAAGTGCCCAGCCGGGTTCTCTTGGGAGAAATATATGTATTTTCTCCTAAATACTTTACCCGAAGAAACTCGTGAGAAC
TATTTGAATAAGTTAAGAGTCAGCCGTAAATTCTGGAGAGAAAAAGGAGGATGCCTCAGTGAGGAGACTATCGCTAAGTT
ACGGGCGGCTAATATTCCTATCATTGTGGAAGAATGTACCGCTTACCATACGGATAAGAAACCGGTACGGATGGAGTATA
TCGATGATATCAATATACCTGAGTTTAAAGAAATCCCTACTTACAAACGTATGTGTGTTTGTATTTTGAAAAACGATCAT
ACATGTAAGTATATGGGTTTTTCCCAGACAAAACGAGAAAGGGATATGAGAAAAGAAGTAATGGACAAATATAATTTTTA
TAAGCATGGGAAACTTTGTTAG

Upstream 100 bases:

>100_bases
TGCATAAACGTCATGTAAAAGTGTTCTCACAAAAAAAGTTCCAGACATGTGTTGAGTGGAAAAATTATGATAAAATGCAT
TATTTACCGGAGGTAGAGTC

Downstream 100 bases:

>100_bases
TCCGGCATATGGTGTTAGGGCTGTCCCTATAGAAAAAATTGTAGCCAACAGCTATAACCCTAATATCATGGCACCACCGG
AAATGCGATTATTGGAACTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MMRRMDVYEATEKRLKIIFDYFDYVYVSFSGGKDSGVLLNLCVDYIRRYAPGRKLGVFHMDYEVQYSQTIEYVEKVYAAN
SDILDIYHCCVPFKVQTCTSMFQQYWRPWSEEYRDIWVREMPHSCLRAKDFDFFKEDMWDYDFQNMFPFWLYQRKMGRRI
CCLVGIRTQESFNRWRAIHSDKNYRKLANYKWTRRMNYSIYNAYPIYDWKTQDIWIANGKFGWTYNHLYDLYYQAGVPLS
RQRVASPFISQAISTLFIYKVVDPDMWGRMVGRVNGVGFAGIYGNTSAMGWRAIKCPAGFSWEKYMYFLLNTLPEETREN
YLNKLRVSRKFWREKGGCLSEETIAKLRAANIPIIVEECTAYHTDKKPVRMEYIDDINIPEFKEIPTYKRMCVCILKNDH
TCKYMGFSQTKRERDMRKEVMDKYNFYKHGKLC

Sequences:

>Translated_433_residues
MMRRMDVYEATEKRLKIIFDYFDYVYVSFSGGKDSGVLLNLCVDYIRRYAPGRKLGVFHMDYEVQYSQTIEYVEKVYAAN
SDILDIYHCCVPFKVQTCTSMFQQYWRPWSEEYRDIWVREMPHSCLRAKDFDFFKEDMWDYDFQNMFPFWLYQRKMGRRI
CCLVGIRTQESFNRWRAIHSDKNYRKLANYKWTRRMNYSIYNAYPIYDWKTQDIWIANGKFGWTYNHLYDLYYQAGVPLS
RQRVASPFISQAISTLFIYKVVDPDMWGRMVGRVNGVGFAGIYGNTSAMGWRAIKCPAGFSWEKYMYFLLNTLPEETREN
YLNKLRVSRKFWREKGGCLSEETIAKLRAANIPIIVEECTAYHTDKKPVRMEYIDDINIPEFKEIPTYKRMCVCILKNDH
TCKYMGFSQTKRERDMRKEVMDKYNFYKHGKLC
>Mature_433_residues
MMRRMDVYEATEKRLKIIFDYFDYVYVSFSGGKDSGVLLNLCVDYIRRYAPGRKLGVFHMDYEVQYSQTIEYVEKVYAAN
SDILDIYHCCVPFKVQTCTSMFQQYWRPWSEEYRDIWVREMPHSCLRAKDFDFFKEDMWDYDFQNMFPFWLYQRKMGRRI
CCLVGIRTQESFNRWRAIHSDKNYRKLANYKWTRRMNYSIYNAYPIYDWKTQDIWIANGKFGWTYNHLYDLYYQAGVPLS
RQRVASPFISQAISTLFIYKVVDPDMWGRMVGRVNGVGFAGIYGNTSAMGWRAIKCPAGFSWEKYMYFLLNTLPEETREN
YLNKLRVSRKFWREKGGCLSEETIAKLRAANIPIIVEECTAYHTDKKPVRMEYIDDINIPEFKEIPTYKRMCVCILKNDH
TCKYMGFSQTKRERDMRKEVMDKYNFYKHGKLC

Specific function: Unknown

COG id: COG3969

COG function: function code R; Predicted phosphoadenosine phosphosulfate sulfotransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786818, Length=435, Percent_Identity=31.9540229885057, Blast_Score=213, Evalue=1e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021845
- InterPro:   IPR002500
- InterPro:   IPR014729 [H]

Pfam domain/function: PF11922 DUF3440; PF01507 PAPS_reduct [H]

EC number: NA

Molecular weight: Translated: 52200; Mature: 52200

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRRMDVYEATEKRLKIIFDYFDYVYVSFSGGKDSGVLLNLCVDYIRRYAPGRKLGVFHM
CCCCCHHHHHHHHHHHHHHEECCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEE
DYEVQYSQTIEYVEKVYAANSDILDIYHCCVPFKVQTCTSMFQQYWRPWSEEYRDIWVRE
CEEEHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
MPHSCLRAKDFDFFKEDMWDYDFQNMFPFWLYQRKMGRRICCLVGIRTQESFNRWRAIHS
CCHHHHCCCCCHHHHHHHCCCCHHHCCHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHCC
DKNYRKLANYKWTRRMNYSIYNAYPIYDWKTQDIWIANGKFGWTYNHLYDLYYQAGVPLS
CCCHHHHHCCEEEEEECCEEEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCCCC
RQRVASPFISQAISTLFIYKVVDPDMWGRMVGRVNGVGFAGIYGNTSAMGWRAIKCPAGF
HHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHCCCCCEEEEECCCCCCCCEEEEECCCCC
SWEKYMYFLLNTLPEETRENYLNKLRVSRKFWREKGGCLSEETIAKLRAANIPIIVEECT
CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEECHH
AYHTDKKPVRMEYIDDINIPEFKEIPTYKRMCVCILKNDHTCKYMGFSQTKRERDMRKEV
HHCCCCCCEEEEECCCCCCCCCCCCCCHHHEEEEEEECCCEEEECCCHHHHHHHHHHHHH
MDKYNFYKHGKLC
HHHHCCCCCCCCC
>Mature Secondary Structure
MMRRMDVYEATEKRLKIIFDYFDYVYVSFSGGKDSGVLLNLCVDYIRRYAPGRKLGVFHM
CCCCCHHHHHHHHHHHHHHEECCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEE
DYEVQYSQTIEYVEKVYAANSDILDIYHCCVPFKVQTCTSMFQQYWRPWSEEYRDIWVRE
CEEEHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
MPHSCLRAKDFDFFKEDMWDYDFQNMFPFWLYQRKMGRRICCLVGIRTQESFNRWRAIHS
CCHHHHCCCCCHHHHHHHCCCCHHHCCHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHCC
DKNYRKLANYKWTRRMNYSIYNAYPIYDWKTQDIWIANGKFGWTYNHLYDLYYQAGVPLS
CCCHHHHHCCEEEEEECCEEEEEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCCCC
RQRVASPFISQAISTLFIYKVVDPDMWGRMVGRVNGVGFAGIYGNTSAMGWRAIKCPAGF
HHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHCCCCCEEEEECCCCCCCCEEEEECCCCC
SWEKYMYFLLNTLPEETRENYLNKLRVSRKFWREKGGCLSEETIAKLRAANIPIIVEECT
CHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEECHH
AYHTDKKPVRMEYIDDINIPEFKEIPTYKRMCVCILKNDHTCKYMGFSQTKRERDMRKEV
HHCCCCCCEEEEECCCCCCCCCCCCCCHHHEEEEEEECCCEEEECCCHHHHHHHHHHHHH
MDKYNFYKHGKLC
HHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]