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The map label for this gene is ybdM [H]

Identifier: 150008244

GI number: 150008244

Start: 1887952

End: 1888476

Strand: Reverse

Name: ybdM [H]

Synonym: BDI_1610

Alternate gene names: 150008244

Gene position: 1888476-1887952 (Counterclockwise)

Preceding gene: 150008245

Following gene: 150008243

Centisome position: 39.25

GC content: 40.76

Gene sequence:

>525_bases
ATGGGAAACTTTGTTAGTCCGGCATATGGTGTTAGGGCTGTCCCTATAGAAAAAATTGTAGCCAACAGCTATAACCCTAA
TATCATGGCACCACCGGAAATGCGATTATTGGAACTTTCCATTTGGGAGGATGGCTATACGATGCCTTGCGTCTGTTATT
ATCTTGAAGAGGATGATTTATATGAGATAGTAGATGGTTATCATCGTTATCTGGTTATGAAGCAATCTCAAAGGATTTAT
GATCGTGAGAAAGGAATGTTGCCTGTAACGGTGATTGAGAAAGATATTTCAAACCGAATGGCTTCAACCATTCGCCATAA
CAGGGCTCGAGGGATGCACAACTTGGAACTTATGACGGAGATTGTTACGGAGTTGGTCAAATCTGGGATGTCTGATAAGT
GGATCATGCGTAATATTGGAATGGATAAAAATGAGTTACTTCGGTTCAAGCAGATTTCGGGATTAGCTGAATTATTCCGG
GATAAAGAATTCGGTTGGTCTGATGACTGGTCGGAAGAAGATTAA

Upstream 100 bases:

>100_bases
TTGAAAAACGATCATACATGTAAGTATATGGGTTTTTCCCAGACAAAACGAGAAAGGGATATGAGAAAAGAAGTAATGGA
CAAATATAATTTTTATAAGC

Downstream 100 bases:

>100_bases
GCTTCTTACATTTTGTTTGGCTGAGCGTTTTTTGCCTTTTATGGCTCTGTTGAGTACATATATACTAATTTTTTGTACAT
TTGCCCCCGACTTTTCACAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MGNFVSPAYGVRAVPIEKIVANSYNPNIMAPPEMRLLELSIWEDGYTMPCVCYYLEEDDLYEIVDGYHRYLVMKQSQRIY
DREKGMLPVTVIEKDISNRMASTIRHNRARGMHNLELMTEIVTELVKSGMSDKWIMRNIGMDKNELLRFKQISGLAELFR
DKEFGWSDDWSEED

Sequences:

>Translated_174_residues
MGNFVSPAYGVRAVPIEKIVANSYNPNIMAPPEMRLLELSIWEDGYTMPCVCYYLEEDDLYEIVDGYHRYLVMKQSQRIY
DREKGMLPVTVIEKDISNRMASTIRHNRARGMHNLELMTEIVTELVKSGMSDKWIMRNIGMDKNELLRFKQISGLAELFR
DKEFGWSDDWSEED
>Mature_173_residues
GNFVSPAYGVRAVPIEKIVANSYNPNIMAPPEMRLLELSIWEDGYTMPCVCYYLEEDDLYEIVDGYHRYLVMKQSQRIYD
REKGMLPVTVIEKDISNRMASTIRHNRARGMHNLELMTEIVTELVKSGMSDKWIMRNIGMDKNELLRFKQISGLAELFRD
KEFGWSDDWSEED

Specific function: Unknown

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786817, Length=163, Percent_Identity=46.0122699386503, Blast_Score=143, Evalue=5e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003115 [H]

Pfam domain/function: PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 20385; Mature: 20253

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
6.9 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
6.4 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNFVSPAYGVRAVPIEKIVANSYNPNIMAPPEMRLLELSIWEDGYTMPCVCYYLEEDDL
CCCCCCCCCCCCCCHHHHHHHCCCCCCEECCCCCEEEEEEECCCCCCCCEEEEEECCCCH
YEIVDGYHRYLVMKQSQRIYDREKGMLPVTVIEKDISNRMASTIRHNRARGMHNLELMTE
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
IVTELVKSGMSDKWIMRNIGMDKNELLRFKQISGLAELFRDKEFGWSDDWSEED
HHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
GNFVSPAYGVRAVPIEKIVANSYNPNIMAPPEMRLLELSIWEDGYTMPCVCYYLEEDDL
CCCCCCCCCCCCCHHHHHHHCCCCCCEECCCCCEEEEEEECCCCCCCCEEEEEECCCCH
YEIVDGYHRYLVMKQSQRIYDREKGMLPVTVIEKDISNRMASTIRHNRARGMHNLELMTE
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
IVTELVKSGMSDKWIMRNIGMDKNELLRFKQISGLAELFRDKEFGWSDDWSEED
HHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]