Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
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Accession | NC_009615 |
Length | 4,811,379 |
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The map label for this gene is dcp [H]
Identifier: 150008236
GI number: 150008236
Start: 1876811
End: 1878931
Strand: Reverse
Name: dcp [H]
Synonym: BDI_1602
Alternate gene names: 150008236
Gene position: 1878931-1876811 (Counterclockwise)
Preceding gene: 150008238
Following gene: 150008235
Centisome position: 39.05
GC content: 48.99
Gene sequence:
>2121_bases ATGAATAAAACGCTTATGGCCGCAGGTTTAGCGGTTATTTTGGGAGCTTGTTCCTCCTCAAAGAAAAGCGATGTAGCGGA AGGCGCTACACCCAATCCGTTTTTTGCGGAGTATACGACACCGTTCGGGGTGCCTCCGTTTGACCAAATAGAGGTGGCTC ATTACAAGCCGGCTCTTTTGAAAGGCATGGAAGAGCAGTCGAAGGAGATTGAGGCGATCGTGGCAAATCCGGATGCGCCG ACATTCGAGAATACGATCGTGGCCTTAGACCAAAGTGGCGAGTTGCTTACTAAAGTAATGTATGCTTTCGGTGGCCAATC CAGTGTGAATACCACGGACGAGATCCAAGAGCTCGAACGTGAGCTTTATCCCCTTTTATCCAAACATTCGGATGATATCA GCTTAAATCCCAAGCTTTTCGCCCGGGTGAAATCCGTATATGAGAATCAGGCGAGCTTCCATCTGGATAAGGAACAGAAG AAGCTGTTGGAGGAAACCTATAAAAGTTTTGTCCGGGGAGGAGCCAATCTGCCGGAGGATAAGCAGGCGAAGTTGCGTGA GCTGAACGAGAAGATATCCATGCTCCAACTTACTTTCGGACAGAATACCCTGAAAGAGACCAACGATTTCCAATTAGTGA TCGATAATAAAGAGGACTTATCCGGTCTGCCGGAAGACGTGATCGTCAAGGCGGCGCAAACGGCCCAAGAGAATGGTCTG GATGGTAAGTGGGTGTTTACCCTCCATAATCCGAGCGTGATGCCTTTCCTTCAATACGCCGATAAGCGTGATTTGCGTGA GAAGATCTTCAAGGCGTATACGAATCGTGGCAACAATAATAATGAGAATGATAATAAGGAGGTCGTTAAGCAGCTGGTTG CCGCTCGTCTGGAGAAAGCCCGATTGATGGGATATGAGGATTATGCCGCTTTCGTATTGGAAGAGAATATGGCGAAGAAC GAGAAGAACGTGTACGACTTGCTTGATAAAATCTGGCCATCTGCCTTGGCGAAAGCGAAAGAGGAATTGGCCGATATCAA CGCCGAGATCAAGAAGGAAGGCGGTAATTACGAGGCCGAGGGCTGGGACTGGCGTTATTATTTCGAGAAAGCCAAGAAAG CGAAATATAACTTGGACGAGAACGAGATGCGTCCTTATTTTGAGTTGGGACATGTACGTGAGGGCATCTTCTATGTAGCC AATAAATTATACGGTATCACGTTTACCGAGATCAAGGACATCCCGAAACCGGACCCCGACGCTCTCGCTTTCGAGTGCAA GGATAAAGATGGTACGCATCTGGGCGTATTGTATATGGATTTCTTTACCCGCCCGGGCAAAGGAGGTGGCGCATGGTGCG GCGGTTACCGTTCACAAACGTATAAGGATGGGAAACGGGTAGCCCCGGTGGTTACTACCGTATTTAATTTCAGCAAACCG GCGGAGGGACAACCGGCGCTTTTGACGGCCGACGAGACCGAGACCGTATTCCATGAGTTCGGTCATGCCTTGCACGGTTT ATTCTGCGATGTTCATTATTATGGCGTGTCCGACGTGCCTCGTGACTTTGTGGAGCTACCTTCGCAAGTCGATGAGCATT GGGCCGTTGAGCCGGAGGTATTGAAAGTGTACGCTAAACATTACCAGACCGGCGAGGTAATACCGCAAGCCCTTGTAGAC AAGATGATCAAGAGTGGCAAGTATGGACAAGGCTTCGCTACGACGGAGTATCTGGCCGCCTCTTATCTGGATATGGATTA TCATGTATTGAAAGAGATCCCTGCCGATTTGGATATCGAGAAATTTGAGGCGAAGGTCTTGGGCGATCGTGGTCTGATCC GTCAGATTCCGTCTCGCTATCGCTCCACTTATTTCGGACATACGATGGAAGGTGGATATACAGCCGGTTATTATAGTTAT ATCTGGGCGGAAGTGTTGGATTGCGACGCTTTCCAAGCTTATAAGGAGACGGGTAATATCTTCAACCCGGAGGTTGCCTC TAAATTCCGTAAATACGTACTGACCCCGGGCGGCATCGACGACGCTATGGACATGTACGTGAATTTCCGTGGCAAACAAC CTAGCATCGATCCGCTGTTGGAGAACAGAGGGCTAAAATGA
Upstream 100 bases:
>100_bases GAAAATCTTTTTCCGGATTCTAAATAATAACAATTTGAAATAGAATTGTAACGCAAAACTTCGTTATCTTTGTCCATTGT AATTCTAATATAACAATGGC
Downstream 100 bases:
>100_bases GCAGAACAATTTATAACTCATAAATCAAAAAATCAGTAAAGATGAAACAATTAATTATGGCAGCAGGATTAGCCGTTATG CTTACTGCCTGCGGTACTTC
Product: peptidyl-dipeptidase
Products: NA
Alternate protein names: Dipeptidyl carboxypeptidase [H]
Number of amino acids: Translated: 706; Mature: 706
Protein sequence:
>706_residues MNKTLMAAGLAVILGACSSSKKSDVAEGATPNPFFAEYTTPFGVPPFDQIEVAHYKPALLKGMEEQSKEIEAIVANPDAP TFENTIVALDQSGELLTKVMYAFGGQSSVNTTDEIQELERELYPLLSKHSDDISLNPKLFARVKSVYENQASFHLDKEQK KLLEETYKSFVRGGANLPEDKQAKLRELNEKISMLQLTFGQNTLKETNDFQLVIDNKEDLSGLPEDVIVKAAQTAQENGL DGKWVFTLHNPSVMPFLQYADKRDLREKIFKAYTNRGNNNNENDNKEVVKQLVAARLEKARLMGYEDYAAFVLEENMAKN EKNVYDLLDKIWPSALAKAKEELADINAEIKKEGGNYEAEGWDWRYYFEKAKKAKYNLDENEMRPYFELGHVREGIFYVA NKLYGITFTEIKDIPKPDPDALAFECKDKDGTHLGVLYMDFFTRPGKGGGAWCGGYRSQTYKDGKRVAPVVTTVFNFSKP AEGQPALLTADETETVFHEFGHALHGLFCDVHYYGVSDVPRDFVELPSQVDEHWAVEPEVLKVYAKHYQTGEVIPQALVD KMIKSGKYGQGFATTEYLAASYLDMDYHVLKEIPADLDIEKFEAKVLGDRGLIRQIPSRYRSTYFGHTMEGGYTAGYYSY IWAEVLDCDAFQAYKETGNIFNPEVASKFRKYVLTPGGIDDAMDMYVNFRGKQPSIDPLLENRGLK
Sequences:
>Translated_706_residues MNKTLMAAGLAVILGACSSSKKSDVAEGATPNPFFAEYTTPFGVPPFDQIEVAHYKPALLKGMEEQSKEIEAIVANPDAP TFENTIVALDQSGELLTKVMYAFGGQSSVNTTDEIQELERELYPLLSKHSDDISLNPKLFARVKSVYENQASFHLDKEQK KLLEETYKSFVRGGANLPEDKQAKLRELNEKISMLQLTFGQNTLKETNDFQLVIDNKEDLSGLPEDVIVKAAQTAQENGL DGKWVFTLHNPSVMPFLQYADKRDLREKIFKAYTNRGNNNNENDNKEVVKQLVAARLEKARLMGYEDYAAFVLEENMAKN EKNVYDLLDKIWPSALAKAKEELADINAEIKKEGGNYEAEGWDWRYYFEKAKKAKYNLDENEMRPYFELGHVREGIFYVA NKLYGITFTEIKDIPKPDPDALAFECKDKDGTHLGVLYMDFFTRPGKGGGAWCGGYRSQTYKDGKRVAPVVTTVFNFSKP AEGQPALLTADETETVFHEFGHALHGLFCDVHYYGVSDVPRDFVELPSQVDEHWAVEPEVLKVYAKHYQTGEVIPQALVD KMIKSGKYGQGFATTEYLAASYLDMDYHVLKEIPADLDIEKFEAKVLGDRGLIRQIPSRYRSTYFGHTMEGGYTAGYYSY IWAEVLDCDAFQAYKETGNIFNPEVASKFRKYVLTPGGIDDAMDMYVNFRGKQPSIDPLLENRGLK >Mature_706_residues MNKTLMAAGLAVILGACSSSKKSDVAEGATPNPFFAEYTTPFGVPPFDQIEVAHYKPALLKGMEEQSKEIEAIVANPDAP TFENTIVALDQSGELLTKVMYAFGGQSSVNTTDEIQELERELYPLLSKHSDDISLNPKLFARVKSVYENQASFHLDKEQK KLLEETYKSFVRGGANLPEDKQAKLRELNEKISMLQLTFGQNTLKETNDFQLVIDNKEDLSGLPEDVIVKAAQTAQENGL DGKWVFTLHNPSVMPFLQYADKRDLREKIFKAYTNRGNNNNENDNKEVVKQLVAARLEKARLMGYEDYAAFVLEENMAKN EKNVYDLLDKIWPSALAKAKEELADINAEIKKEGGNYEAEGWDWRYYFEKAKKAKYNLDENEMRPYFELGHVREGIFYVA NKLYGITFTEIKDIPKPDPDALAFECKDKDGTHLGVLYMDFFTRPGKGGGAWCGGYRSQTYKDGKRVAPVVTTVFNFSKP AEGQPALLTADETETVFHEFGHALHGLFCDVHYYGVSDVPRDFVELPSQVDEHWAVEPEVLKVYAKHYQTGEVIPQALVD KMIKSGKYGQGFATTEYLAASYLDMDYHVLKEIPADLDIEKFEAKVLGDRGLIRQIPSRYRSTYFGHTMEGGYTAGYYSY IWAEVLDCDAFQAYKETGNIFNPEVASKFRKYVLTPGGIDDAMDMYVNFRGKQPSIDPLLENRGLK
Specific function: Removes dipeptides from the C-termini of N-blocked tripeptides, tetrapeptides and larger peptides [H]
COG id: COG0339
COG function: function code E; Zn-dependent oligopeptidases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M3 family [H]
Homologues:
Organism=Homo sapiens, GI4507491, Length=636, Percent_Identity=29.2452830188679, Blast_Score=287, Evalue=2e-77, Organism=Homo sapiens, GI14149738, Length=637, Percent_Identity=30.6122448979592, Blast_Score=274, Evalue=3e-73, Organism=Homo sapiens, GI156105687, Length=678, Percent_Identity=25.6637168141593, Blast_Score=166, Evalue=6e-41, Organism=Escherichia coli, GI1787819, Length=680, Percent_Identity=41.4705882352941, Blast_Score=539, Evalue=1e-154, Organism=Escherichia coli, GI1789913, Length=678, Percent_Identity=34.3657817109145, Blast_Score=397, Evalue=1e-111, Organism=Caenorhabditis elegans, GI32565901, Length=549, Percent_Identity=20.7650273224044, Blast_Score=84, Evalue=2e-16, Organism=Caenorhabditis elegans, GI71999758, Length=576, Percent_Identity=19.4444444444444, Blast_Score=76, Evalue=6e-14, Organism=Saccharomyces cerevisiae, GI6319793, Length=622, Percent_Identity=30.7073954983923, Blast_Score=225, Evalue=2e-59, Organism=Saccharomyces cerevisiae, GI6322715, Length=724, Percent_Identity=24.3093922651934, Blast_Score=116, Evalue=1e-26, Organism=Drosophila melanogaster, GI21356111, Length=568, Percent_Identity=23.5915492957746, Blast_Score=149, Evalue=6e-36, Organism=Drosophila melanogaster, GI20129717, Length=412, Percent_Identity=27.6699029126214, Blast_Score=143, Evalue=4e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001567 [H]
Pfam domain/function: PF01432 Peptidase_M3 [H]
EC number: =3.4.15.5 [H]
Molecular weight: Translated: 79789; Mature: 79789
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKTLMAAGLAVILGACSSSKKSDVAEGATPNPFFAEYTTPFGVPPFDQIEVAHYKPALL CCCHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCEEECCCCCCCCCCCCEEHHHCCHHHH KGMEEQSKEIEAIVANPDAPTFENTIVALDQSGELLTKVMYAFGGQSSVNTTDEIQELER HCHHHHHCCEEEEEECCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHH ELYPLLSKHSDDISLNPKLFARVKSVYENQASFHLDKEQKKLLEETYKSFVRGGANLPED HHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCH KQAKLRELNEKISMLQLTFGQNTLKETNDFQLVIDNKEDLSGLPEDVIVKAAQTAQENGL HHHHHHHHHHHHHHHEEECCCHHHCCCCCEEEEECCCHHCCCCCHHHHHHHHHHHHHCCC DGKWVFTLHNPSVMPFLQYADKRDLREKIFKAYTNRGNNNNENDNKEVVKQLVAARLEKA CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH RLMGYEDYAAFVLEENMAKNEKNVYDLLDKIWPSALAKAKEELADINAEIKKEGGNYEAE HHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCC GWDWRYYFEKAKKAKYNLDENEMRPYFELGHVREGIFYVANKLYGITFTEIKDIPKPDPD CCCHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCC ALAFECKDKDGTHLGVLYMDFFTRPGKGGGAWCGGYRSQTYKDGKRVAPVVTTVFNFSKP CEEEEECCCCCCEEEEEEEEHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC AEGQPALLTADETETVFHEFGHALHGLFCDVHYYGVSDVPRDFVELPSQVDEHWAVEPEV CCCCCEEEECCCHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHCCCCHHH LKVYAKHYQTGEVIPQALVDKMIKSGKYGQGFATTEYLAASYLDMDYHVLKEIPADLDIE HHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCHH KFEAKVLGDRGLIRQIPSRYRSTYFGHTMEGGYTAGYYSYIWAEVLDCDAFQAYKETGNI HHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCC FNPEVASKFRKYVLTPGGIDDAMDMYVNFRGKQPSIDPLLENRGLK CCHHHHHHHHHHCCCCCCCHHHHHHHEEECCCCCCCCHHHHCCCCC >Mature Secondary Structure MNKTLMAAGLAVILGACSSSKKSDVAEGATPNPFFAEYTTPFGVPPFDQIEVAHYKPALL CCCHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCEEECCCCCCCCCCCCEEHHHCCHHHH KGMEEQSKEIEAIVANPDAPTFENTIVALDQSGELLTKVMYAFGGQSSVNTTDEIQELER HCHHHHHCCEEEEEECCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHH ELYPLLSKHSDDISLNPKLFARVKSVYENQASFHLDKEQKKLLEETYKSFVRGGANLPED HHHHHHHCCCCCCCCCHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCH KQAKLRELNEKISMLQLTFGQNTLKETNDFQLVIDNKEDLSGLPEDVIVKAAQTAQENGL HHHHHHHHHHHHHHHEEECCCHHHCCCCCEEEEECCCHHCCCCCHHHHHHHHHHHHHCCC DGKWVFTLHNPSVMPFLQYADKRDLREKIFKAYTNRGNNNNENDNKEVVKQLVAARLEKA CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH RLMGYEDYAAFVLEENMAKNEKNVYDLLDKIWPSALAKAKEELADINAEIKKEGGNYEAE HHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCC GWDWRYYFEKAKKAKYNLDENEMRPYFELGHVREGIFYVANKLYGITFTEIKDIPKPDPD CCCHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCC ALAFECKDKDGTHLGVLYMDFFTRPGKGGGAWCGGYRSQTYKDGKRVAPVVTTVFNFSKP CEEEEECCCCCCEEEEEEEEHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC AEGQPALLTADETETVFHEFGHALHGLFCDVHYYGVSDVPRDFVELPSQVDEHWAVEPEV CCCCCEEEECCCHHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHCCCCHHH LKVYAKHYQTGEVIPQALVDKMIKSGKYGQGFATTEYLAASYLDMDYHVLKEIPADLDIE HHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHCCCCCCHH KFEAKVLGDRGLIRQIPSRYRSTYFGHTMEGGYTAGYYSYIWAEVLDCDAFQAYKETGNI HHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCC FNPEVASKFRKYVLTPGGIDDAMDMYVNFRGKQPSIDPLLENRGLK CCHHHHHHHHHHCCCCCCCHHHHHHHEEECCCCCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8226676; 9097039; 9278503 [H]