Definition Parabacteroides distasonis ATCC 8503 chromosome, complete genome.
Accession NC_009615
Length 4,811,379

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The map label for this gene is 150008221

Identifier: 150008221

GI number: 150008221

Start: 1861080

End: 1861430

Strand: Reverse

Name: 150008221

Synonym: BDI_1587

Alternate gene names: NA

Gene position: 1861430-1861080 (Counterclockwise)

Preceding gene: 150008222

Following gene: 150008220

Centisome position: 38.69

GC content: 40.46

Gene sequence:

>351_bases
ATGAATGATTGCATAATTGGATATTTATTTGTTTCTTTGTCAATATTCTATTTTCTTATGAAGTCGAGACAAGAGATCCT
AGCGTTATTAAGAGACTTCAAGGTTCGTAAAGGCAAAAAGTACGGAATCTTGAAGATGGGTATCTTTGGCTCTGTAGCTC
GTGATCAACAGACGGAAAGCAGTGATGTGGACATTTATTACGAGGGTGAGGCGCAAGGGCTTTTCTCTCTCTCCCATTTG
AAAAATGAATTGGAAGAATTGTTGGGAAGCCCGGTGGATATCATCCGTCTTAGAGACCGGATGAATCAGTTGCTTCGTAA
ACGAATCGAGAGGGAGGGAATCTATGTTTGA

Upstream 100 bases:

>100_bases
CATCATCCCCCTGCTCCCCTTCAAGCAAGGCAAGAGCTTGCGCAATATCCGGCGGGCGATCGTGAAGTATGTGCTGGGGG
AGGGGTAGGTGTTTTGGTTT

Downstream 100 bases:

>100_bases
TACGGAGTTGGCCTTGGATACCTTGTCGCAGATAAAGGATACTCTTTCAATGATAATGGCAAGAACTTCGCATATTCATA
AGGTTGATGATTTTTATATG

Product: putative nucleotidyltransferase

Products: NA

Alternate protein names: DNA Polymerase Beta Domain Protein Region; DNA Polymerase Beta Domain-Containing Protein Region; Nucleotidyltransferase; DNA Polymerase Beta Domain-Containing Protein; DNA Polymerase Beta Subunit; DNA Polymerase Beta-Like Region; Nucleotidyltransferase Domain Protein

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MNDCIIGYLFVSLSIFYFLMKSRQEILALLRDFKVRKGKKYGILKMGIFGSVARDQQTESSDVDIYYEGEAQGLFSLSHL
KNELEELLGSPVDIIRLRDRMNQLLRKRIEREGIYV

Sequences:

>Translated_116_residues
MNDCIIGYLFVSLSIFYFLMKSRQEILALLRDFKVRKGKKYGILKMGIFGSVARDQQTESSDVDIYYEGEAQGLFSLSHL
KNELEELLGSPVDIIRLRDRMNQLLRKRIEREGIYV
>Mature_116_residues
MNDCIIGYLFVSLSIFYFLMKSRQEILALLRDFKVRKGKKYGILKMGIFGSVARDQQTESSDVDIYYEGEAQGLFSLSHL
KNELEELLGSPVDIIRLRDRMNQLLRKRIEREGIYV

Specific function: Unknown

COG id: COG1669

COG function: function code R; Predicted nucleotidyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13542; Mature: 13542

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDCIIGYLFVSLSIFYFLMKSRQEILALLRDFKVRKGKKYGILKMGIFGSVARDQQTES
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHCCCCCC
SDVDIYYEGEAQGLFSLSHLKNELEELLGSPVDIIRLRDRMNQLLRKRIEREGIYV
CCCEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNDCIIGYLFVSLSIFYFLMKSRQEILALLRDFKVRKGKKYGILKMGIFGSVARDQQTES
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHCCCCCC
SDVDIYYEGEAQGLFSLSHLKNELEELLGSPVDIIRLRDRMNQLLRKRIEREGIYV
CCCEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA