Definition Parabacteroides distasonis ATCC 8503 chromosome, complete genome.
Accession NC_009615
Length 4,811,379

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The map label for this gene is 150008169

Identifier: 150008169

GI number: 150008169

Start: 1799176

End: 1800618

Strand: Reverse

Name: 150008169

Synonym: BDI_1535

Alternate gene names: NA

Gene position: 1800618-1799176 (Counterclockwise)

Preceding gene: 150008170

Following gene: 150008168

Centisome position: 37.42

GC content: 46.5

Gene sequence:

>1443_bases
ATGGTGAGTAATATAGTATCTTACAGTATTCTTTTGCTGTATCTTCTTCCATGCGCTTCATGGAGCCAAGGGAACGATGT
GGATTTAAGCTTGGAACAATCTCTCGACCTGCTTCATAAGGAAAATAAAAGCTTGAAAATAGCCGGGAAAGAAGTGGAAT
GGGCTCGGAATGAGCATCAAAAGCTAAACGCTTTTTGGTATCCGTCGGTGAACGCCGCGGGTGCTTTCGTACATATGTCG
AATCCGATAGAGGTACGGCAGTCGCTGAGTAAATATACGGAACCGGCGAAGGAGTTTGTCCATAATTATATCCCGGATAA
TGAGCTGATCATGTCGGTATTGGATAAGATCGGGCAAGGTACTTTCTCGCTTCCGCTGATCTCCCAAAACATCACTTCTA
TAGACGCTACGGTGACGTGGCCTGTTTTCACGGGAGGAAAACGTATCTACGCGAACAAGATCGGAAAGACGATGGTCTCT
ATAGCGGAGGTGAATAGGAATCAAGTGGATGCCAACCAACAATCCTTATTGATCGAGGCTTATTTCGGGCTTCGTCTGGG
ACAAAGTGTGGTGGACGTAAAAACGGAAGTGTACAATTCTTTGAAAACCCATTATGACCAAGCCCTTAAATTAGAGCAAA
ACGGGATGATCAATCGGGCCGAGCGTCTGTTCGCTCAGGTAAGTATGGACGAGGCGAAACGAGAACTGGAATCGGCCCGT
AAGGATTTAACGGTCGCTCAACAGGCGTTTAAAAGCTTGATTAATATGGAGGAGGGGAGTGACGTACGTACCACGACTCC
TTTATTCATTAATGAGGCGCTTCCTCCGGCTCAATACTTCAAGGATCTGGTTCCGATGAATAATTATATAGTCAATCAAT
TGAAATTGCAGCAGGTTGTAGCCGATAATCAACTAAAGATCGGCCGGTCCGCTTATGTCCCGAATATCGCTTTATTCGGC
AAACAGACTTTGTACGCTGATGGACTGGATAAATATTTGTTGCCTCGTACGATGGTGGGAGTTGGTTTTACGTGGAATAT
TTTTGATGGCTTGAACCGGGAGAAAACCATCCGGCAGGCAAAGATCGCTAGTCAGTCGCTTCGTTTGGGTAAGGAGAAGG
CGATTACGGATCTGGAGGTCGGTATCGATAAATTCTACAGCCAGCTACAAAATGCCTTGGATAACGTAAAGGCTTTGGAT
ACGACGATCGAGATGAGCCGGGAACTGGTCCGGGTGCGGAAGAAATCCTTCCAAGAGGGAATGGCTACTTCTACGGAGGT
AGTCGATGCCGAGGTTATGCTGGCGAAGGTGAAGACCGCTTTTCTTTTGGCTTATTATCAGTATGATGTAGCCTTGATTA
ATCTGCTGTCTGTCTGCGGTACGCCGGAGCAGTTCCACCAATACAAGATGGAGGGAAAGACCGAGGAGCTTTTGGGGAAT
TGA

Upstream 100 bases:

>100_bases
CTGGTTACTTGGTTCCTTCCCAACTTGAAAAAGAAGTAAAAACAATCCTCCCTTTTTCGCTGTTATTACTCCAACTGAAC
GTCAATTACTAAATGAGTTT

Downstream 100 bases:

>100_bases
AAATTGAGAATTGAAAATTTAGGAGTTATGGATAAAACTAAGAGATATTTGAGTGTGGCCTTCGTCGCAGTCTTGGCGAT
TGTTATAGTTGTCTCGTTGA

Product: putative outer membrane protein

Products: NA

Alternate protein names: Outer Membrane Protein; Outer Membrane Efflux Family Protein; Type I Secretion Outer Membrane Protein; LipD Protein; RND Family Drug Transporter; Outer Membrane Efflux Protein Domain Protein; Outer Membrane Protein-Like; RND Family Efflux Pump Outer Membrane Protein

Number of amino acids: Translated: 480; Mature: 480

Protein sequence:

>480_residues
MVSNIVSYSILLLYLLPCASWSQGNDVDLSLEQSLDLLHKENKSLKIAGKEVEWARNEHQKLNAFWYPSVNAAGAFVHMS
NPIEVRQSLSKYTEPAKEFVHNYIPDNELIMSVLDKIGQGTFSLPLISQNITSIDATVTWPVFTGGKRIYANKIGKTMVS
IAEVNRNQVDANQQSLLIEAYFGLRLGQSVVDVKTEVYNSLKTHYDQALKLEQNGMINRAERLFAQVSMDEAKRELESAR
KDLTVAQQAFKSLINMEEGSDVRTTTPLFINEALPPAQYFKDLVPMNNYIVNQLKLQQVVADNQLKIGRSAYVPNIALFG
KQTLYADGLDKYLLPRTMVGVGFTWNIFDGLNREKTIRQAKIASQSLRLGKEKAITDLEVGIDKFYSQLQNALDNVKALD
TTIEMSRELVRVRKKSFQEGMATSTEVVDAEVMLAKVKTAFLLAYYQYDVALINLLSVCGTPEQFHQYKMEGKTEELLGN

Sequences:

>Translated_480_residues
MVSNIVSYSILLLYLLPCASWSQGNDVDLSLEQSLDLLHKENKSLKIAGKEVEWARNEHQKLNAFWYPSVNAAGAFVHMS
NPIEVRQSLSKYTEPAKEFVHNYIPDNELIMSVLDKIGQGTFSLPLISQNITSIDATVTWPVFTGGKRIYANKIGKTMVS
IAEVNRNQVDANQQSLLIEAYFGLRLGQSVVDVKTEVYNSLKTHYDQALKLEQNGMINRAERLFAQVSMDEAKRELESAR
KDLTVAQQAFKSLINMEEGSDVRTTTPLFINEALPPAQYFKDLVPMNNYIVNQLKLQQVVADNQLKIGRSAYVPNIALFG
KQTLYADGLDKYLLPRTMVGVGFTWNIFDGLNREKTIRQAKIASQSLRLGKEKAITDLEVGIDKFYSQLQNALDNVKALD
TTIEMSRELVRVRKKSFQEGMATSTEVVDAEVMLAKVKTAFLLAYYQYDVALINLLSVCGTPEQFHQYKMEGKTEELLGN
>Mature_480_residues
MVSNIVSYSILLLYLLPCASWSQGNDVDLSLEQSLDLLHKENKSLKIAGKEVEWARNEHQKLNAFWYPSVNAAGAFVHMS
NPIEVRQSLSKYTEPAKEFVHNYIPDNELIMSVLDKIGQGTFSLPLISQNITSIDATVTWPVFTGGKRIYANKIGKTMVS
IAEVNRNQVDANQQSLLIEAYFGLRLGQSVVDVKTEVYNSLKTHYDQALKLEQNGMINRAERLFAQVSMDEAKRELESAR
KDLTVAQQAFKSLINMEEGSDVRTTTPLFINEALPPAQYFKDLVPMNNYIVNQLKLQQVVADNQLKIGRSAYVPNIALFG
KQTLYADGLDKYLLPRTMVGVGFTWNIFDGLNREKTIRQAKIASQSLRLGKEKAITDLEVGIDKFYSQLQNALDNVKALD
TTIEMSRELVRVRKKSFQEGMATSTEVVDAEVMLAKVKTAFLLAYYQYDVALINLLSVCGTPEQFHQYKMEGKTEELLGN

Specific function: Unknown

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54093; Mature: 54093

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSNIVSYSILLLYLLPCASWSQGNDVDLSLEQSLDLLHKENKSLKIAGKEVEWARNEHQ
CCCHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHCCCCEEEECCCHHHHHHHHH
KLNAFWYPSVNAAGAFVHMSNPIEVRQSLSKYTEPAKEFVHNYIPDNELIMSVLDKIGQG
HCCEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
TFSLPLISQNITSIDATVTWPVFTGGKRIYANKIGKTMVSIAEVNRNQVDANQQSLLIEA
CEECCCHHCCCCCCCCEEEEEEEECCCEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
YFGLRLGQSVVDVKTEVYNSLKTHYDQALKLEQNGMINRAERLFAQVSMDEAKRELESAR
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
KDLTVAQQAFKSLINMEEGSDVRTTTPLFINEALPPAQYFKDLVPMNNYIVNQLKLQQVV
HHHHHHHHHHHHHHCCCCCCCCEECCCCCEECCCCHHHHHHHHCCCHHHHHHHHHHHHHH
ADNQLKIGRSAYVPNIALFGKQTLYADGLDKYLLPRTMVGVGFTWNIFDGLNREKTIRQA
HCCCCCCCCHHCCCCEEECCCCHHHHCCCHHHHHHHHHHHCCEEEHHHCCCCHHHHHHHH
KIASQSLRLGKEKAITDLEVGIDKFYSQLQNALDNVKALDTTIEMSRELVRVRKKSFQEG
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
MATSTEVVDAEVMLAKVKTAFLLAYYQYDVALINLLSVCGTPEQFHQYKMEGKTEELLGN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHCCC
>Mature Secondary Structure
MVSNIVSYSILLLYLLPCASWSQGNDVDLSLEQSLDLLHKENKSLKIAGKEVEWARNEHQ
CCCHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHCCCCEEEECCCHHHHHHHHH
KLNAFWYPSVNAAGAFVHMSNPIEVRQSLSKYTEPAKEFVHNYIPDNELIMSVLDKIGQG
HCCEEECCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
TFSLPLISQNITSIDATVTWPVFTGGKRIYANKIGKTMVSIAEVNRNQVDANQQSLLIEA
CEECCCHHCCCCCCCCEEEEEEEECCCEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
YFGLRLGQSVVDVKTEVYNSLKTHYDQALKLEQNGMINRAERLFAQVSMDEAKRELESAR
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
KDLTVAQQAFKSLINMEEGSDVRTTTPLFINEALPPAQYFKDLVPMNNYIVNQLKLQQVV
HHHHHHHHHHHHHHCCCCCCCCEECCCCCEECCCCHHHHHHHHCCCHHHHHHHHHHHHHH
ADNQLKIGRSAYVPNIALFGKQTLYADGLDKYLLPRTMVGVGFTWNIFDGLNREKTIRQA
HCCCCCCCCHHCCCCEEECCCCHHHHCCCHHHHHHHHHHHCCEEEHHHCCCCHHHHHHHH
KIASQSLRLGKEKAITDLEVGIDKFYSQLQNALDNVKALDTTIEMSRELVRVRKKSFQEG
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
MATSTEVVDAEVMLAKVKTAFLLAYYQYDVALINLLSVCGTPEQFHQYKMEGKTEELLGN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA