| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150008140
Identifier: 150008140
GI number: 150008140
Start: 1757799
End: 1759481
Strand: Reverse
Name: 150008140
Synonym: BDI_1506
Alternate gene names: NA
Gene position: 1759481-1757799 (Counterclockwise)
Preceding gene: 150008141
Following gene: 150008139
Centisome position: 36.57
GC content: 53.83
Gene sequence:
>1683_bases ATGAAGAAGTCTATGATAAAACAATGTATCTTGTCGCTCCTCTGCCTTTTATGGGTGGGGCAAACGCTTCTCGCAGGGGA ATTGCGAGAGCGGGTTTACCTGCAAACGGATAAGCAATTTTATCTGTCGGGCGAGCTTGTATGGATGAAATTCATTGCCA CGGATTTGGACCAACGGTTATCCGACGTGAGCAAGGTCGGGTATGTGGAGCTTCTGGATAGCGCCTCGGCGGTCGTGCAA GCCCGACTCGTGCTGGAGAAGGGGGTGGGCGATGGTTGTCTGCAGTTGCCTTCTACCTTGCCGACCGGAAACTACCGGCT GGTGGCCTATACCCGTTATATGCGGAACGAGGGGGAGGAGGTCTTCTTTGAGAAGCCGCTGGCGGTGGTGAACACTTTCG TGACGAACGAGACCCTGCTGACGGATACTTTATTGCCCGCTTACTCTTTTACGAGGCGAGAGGACCCGGTTTCCGTATCA CCGGACCGTATGACCTATGATACCCGTTCAGGGGGGGAGATCCGGATAAACGGCCTGCCCCCGGATCTACAGACCCTATC GGTCTCTATCGCCGGGATTGACTTGTATAAACCTTCCGCCCGGAGCGGTATCGTTGATTGGAAACAAAGCATGCCTACTA CGGGATCATCGCCTGCCGATCGTAAATTCTTGGCAGAATACGAGGGGCCGATCCTGACGGGGAAAGTGATCGATCTGTCT ACGGGCGAACCTTCGTCTAAAGAGGCGGTGAGGCCTTTATTGGGCTTTTCCGGGGGTGAGATCCGTCTTTTCGGGGGGCA ACTGGGCCCTGCCGGGGAGGTGACTTTCTTTACGAGACACATATCCGGGACGCACGAGATCGTGACGGTGGCTTTATCCC CTTCCTCCTCTCGCTACCGGGTGGACATCGAATCTCCTTACGCTACGCATCCGGAGAAGGAGCTTCCCGCCTTGAGATTG AATCCCGCTTGGCAAGACGAGTTGGTGAAGCGGAGCGTGGGGCTACAGGTGTTGCATGCTTATCGGTCTGATTCCTTGGT TCGGGAAAAAGCGGAGAAGCCTTGGTTCCAGTGGCAACCGGATTGGAGTTATCTTTTAGATGAGTACACCCGTTTCACGA CGATGGAGGAGGTCGTGATCGAGTTTATCCCCGGCCTTCGTTTCCGTAAGATGGATGGGGTTCGCCGGTTGGCGGTCCTG ACCGAGGAGCGGATCGGGTATACGATCGGTAACTCATTGGTTTTATTGGATGGTATCCCCATCACCGATCACGAGATCAT TTTTAAGTACGATCCCCTAAAAATCCGGAAGATCGATGTGTATAAAGGTAAGTACGTATTCGGTGGGCAGATATTCGACG GTATCGCCTCCTTCTCCTCTTACGAGCATAATTACCCGGGTCTGGTAGTCGATAACTCCACCCAGTTCTTTGATTATGAG GGCACGCAAGCCCAGCGCATCTTCTATATGCCCGCTTACCGGACAGAGGCCGAGAAGCGATCTCCCGTTCCGGATTTCCG CCATACCTTACTTTGGCGACCCGATATCCGGACAAACGGCGAGTCCTCTATATCCATCCCCTTTACCACCTCCGACCTGA CCGGTGATTTCACCATCACCATCGAAGGCCTGACCCAAACCGGCGAGGCCCTCTACGCAACGGAACAATTTCAGGTAAAA TAA
Upstream 100 bases:
>100_bases AGTAATACGTATGCGCTGAAACGTTGTATGGATTGCGGCCGTTTTGGTTCGAAACAGAAGCCCTCTTGGTGGCCTACCAG TCATTTATAATTTAGTTGCT
Downstream 100 bases:
>100_bases CGTGCGGTATGGATTATTCTATTTATCTTTGCCTTGACAAACAAAATATCTTACTATGAAAAAAGAAATCGGAAAATGGT TGATGGATATCGCTAAGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 560; Mature: 560
Protein sequence:
>560_residues MKKSMIKQCILSLLCLLWVGQTLLAGELRERVYLQTDKQFYLSGELVWMKFIATDLDQRLSDVSKVGYVELLDSASAVVQ ARLVLEKGVGDGCLQLPSTLPTGNYRLVAYTRYMRNEGEEVFFEKPLAVVNTFVTNETLLTDTLLPAYSFTRREDPVSVS PDRMTYDTRSGGEIRINGLPPDLQTLSVSIAGIDLYKPSARSGIVDWKQSMPTTGSSPADRKFLAEYEGPILTGKVIDLS TGEPSSKEAVRPLLGFSGGEIRLFGGQLGPAGEVTFFTRHISGTHEIVTVALSPSSSRYRVDIESPYATHPEKELPALRL NPAWQDELVKRSVGLQVLHAYRSDSLVREKAEKPWFQWQPDWSYLLDEYTRFTTMEEVVIEFIPGLRFRKMDGVRRLAVL TEERIGYTIGNSLVLLDGIPITDHEIIFKYDPLKIRKIDVYKGKYVFGGQIFDGIASFSSYEHNYPGLVVDNSTQFFDYE GTQAQRIFYMPAYRTEAEKRSPVPDFRHTLLWRPDIRTNGESSISIPFTTSDLTGDFTITIEGLTQTGEALYATEQFQVK
Sequences:
>Translated_560_residues MKKSMIKQCILSLLCLLWVGQTLLAGELRERVYLQTDKQFYLSGELVWMKFIATDLDQRLSDVSKVGYVELLDSASAVVQ ARLVLEKGVGDGCLQLPSTLPTGNYRLVAYTRYMRNEGEEVFFEKPLAVVNTFVTNETLLTDTLLPAYSFTRREDPVSVS PDRMTYDTRSGGEIRINGLPPDLQTLSVSIAGIDLYKPSARSGIVDWKQSMPTTGSSPADRKFLAEYEGPILTGKVIDLS TGEPSSKEAVRPLLGFSGGEIRLFGGQLGPAGEVTFFTRHISGTHEIVTVALSPSSSRYRVDIESPYATHPEKELPALRL NPAWQDELVKRSVGLQVLHAYRSDSLVREKAEKPWFQWQPDWSYLLDEYTRFTTMEEVVIEFIPGLRFRKMDGVRRLAVL TEERIGYTIGNSLVLLDGIPITDHEIIFKYDPLKIRKIDVYKGKYVFGGQIFDGIASFSSYEHNYPGLVVDNSTQFFDYE GTQAQRIFYMPAYRTEAEKRSPVPDFRHTLLWRPDIRTNGESSISIPFTTSDLTGDFTITIEGLTQTGEALYATEQFQVK >Mature_560_residues MKKSMIKQCILSLLCLLWVGQTLLAGELRERVYLQTDKQFYLSGELVWMKFIATDLDQRLSDVSKVGYVELLDSASAVVQ ARLVLEKGVGDGCLQLPSTLPTGNYRLVAYTRYMRNEGEEVFFEKPLAVVNTFVTNETLLTDTLLPAYSFTRREDPVSVS PDRMTYDTRSGGEIRINGLPPDLQTLSVSIAGIDLYKPSARSGIVDWKQSMPTTGSSPADRKFLAEYEGPILTGKVIDLS TGEPSSKEAVRPLLGFSGGEIRLFGGQLGPAGEVTFFTRHISGTHEIVTVALSPSSSRYRVDIESPYATHPEKELPALRL NPAWQDELVKRSVGLQVLHAYRSDSLVREKAEKPWFQWQPDWSYLLDEYTRFTTMEEVVIEFIPGLRFRKMDGVRRLAVL TEERIGYTIGNSLVLLDGIPITDHEIIFKYDPLKIRKIDVYKGKYVFGGQIFDGIASFSSYEHNYPGLVVDNSTQFFDYE GTQAQRIFYMPAYRTEAEKRSPVPDFRHTLLWRPDIRTNGESSISIPFTTSDLTGDFTITIEGLTQTGEALYATEQFQVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63165; Mature: 63165
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSMIKQCILSLLCLLWVGQTLLAGELRERVYLQTDKQFYLSGELVWMKFIATDLDQRL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCEEEECCCEEEHHHHHHHHHHHH SDVSKVGYVELLDSASAVVQARLVLEKGVGDGCLQLPSTLPTGNYRLVAYTRYMRNEGEE HHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCEEEEEEEEHHHCCCCE VFFEKPLAVVNTFVTNETLLTDTLLPAYSFTRREDPVSVSPDRMTYDTRSGGEIRINGLP EEECCCHHHHHHHHCCCCHHHHHHHCCHHCCCCCCCCCCCCCCEEEECCCCCEEEECCCC PDLQTLSVSIAGIDLYKPSARSGIVDWKQSMPTTGSSPADRKFLAEYEGPILTGKVIDLS CCCCEEEEEEEEEEEECCCCCCCCCHHHHCCCCCCCCCCCHHHHHHCCCCEEEEEEEEEC TGEPSSKEAVRPLLGFSGGEIRLFGGQLGPAGEVTFFTRHISGTHEIVTVALSPSSSRYR CCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEEECCCCEEEEEEEECCCCCEEE VDIESPYATHPEKELPALRLNPAWQDELVKRSVGLQVLHAYRSDSLVREKAEKPWFQWQP EEECCCCCCCCHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEECC DWSYLLDEYTRFTTMEEVVIEFIPGLRFRKMDGVRRLAVLTEERIGYTIGNSLVLLDGIP CHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHCCHHHHHHHHHHHCCEEECCCEEEEECCC ITDHEIIFKYDPLKIRKIDVYKGKYVFGGQIFDGIASFSSYEHNYPGLVVDNSTQFFDYE CCCCEEEEEECCEEEEEEEEECCCEEECCHHHHHHHHHHCCCCCCCCEEECCCCEEEECC GTQAQRIFYMPAYRTEAEKRSPVPDFRHTLLWRPDIRTNGESSISIPFTTSDLTGDFTIT CCCCEEEEEECCCCCCHHHCCCCCCHHHHEEECCCCCCCCCCEEEEEEEECCCCCEEEEE IEGLTQTGEALYATEQFQVK EECCCCCCCEEEEECEEECC >Mature Secondary Structure MKKSMIKQCILSLLCLLWVGQTLLAGELRERVYLQTDKQFYLSGELVWMKFIATDLDQRL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCEEEECCCEEEHHHHHHHHHHHH SDVSKVGYVELLDSASAVVQARLVLEKGVGDGCLQLPSTLPTGNYRLVAYTRYMRNEGEE HHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCEEEEEEEEHHHCCCCE VFFEKPLAVVNTFVTNETLLTDTLLPAYSFTRREDPVSVSPDRMTYDTRSGGEIRINGLP EEECCCHHHHHHHHCCCCHHHHHHHCCHHCCCCCCCCCCCCCCEEEECCCCCEEEECCCC PDLQTLSVSIAGIDLYKPSARSGIVDWKQSMPTTGSSPADRKFLAEYEGPILTGKVIDLS CCCCEEEEEEEEEEEECCCCCCCCCHHHHCCCCCCCCCCCHHHHHHCCCCEEEEEEEEEC TGEPSSKEAVRPLLGFSGGEIRLFGGQLGPAGEVTFFTRHISGTHEIVTVALSPSSSRYR CCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEEECCCCEEEEEEEECCCCCEEE VDIESPYATHPEKELPALRLNPAWQDELVKRSVGLQVLHAYRSDSLVREKAEKPWFQWQP EEECCCCCCCCHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEECC DWSYLLDEYTRFTTMEEVVIEFIPGLRFRKMDGVRRLAVLTEERIGYTIGNSLVLLDGIP CHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHCCHHHHHHHHHHHCCEEECCCEEEEECCC ITDHEIIFKYDPLKIRKIDVYKGKYVFGGQIFDGIASFSSYEHNYPGLVVDNSTQFFDYE CCCCEEEEEECCEEEEEEEEECCCEEECCHHHHHHHHHHCCCCCCCCEEECCCCEEEECC GTQAQRIFYMPAYRTEAEKRSPVPDFRHTLLWRPDIRTNGESSISIPFTTSDLTGDFTIT CCCCEEEEEECCCCCCHHHCCCCCCHHHHEEECCCCCCCCCCEEEEEEEECCCCCEEEEE IEGLTQTGEALYATEQFQVK EECCCCCCCEEEEECEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA