| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is xanP [H]
Identifier: 150008137
GI number: 150008137
Start: 1753101
End: 1754426
Strand: Reverse
Name: xanP [H]
Synonym: BDI_1503
Alternate gene names: 150008137
Gene position: 1754426-1753101 (Counterclockwise)
Preceding gene: 150008138
Following gene: 150008136
Centisome position: 36.46
GC content: 52.34
Gene sequence:
>1326_bases ATGGATACGGATTTGATTTACGGGATCGATGACCGTCCGCCTTTGAAAGAGACGCTTTTTGCCGCCATCCAGCATCTACT GGCTATTTTCGTGGCGATCATAACACCTCCCTTGATTATCGCCGGGGCGCTGAAACTGGATCTGGAGACGACCGGTTTCT TGGTTTCCATGGCCCTATTCGCCTCCGGGGTATCCACATTCGTTCAATGTCGTAAATTAGGACCGGTCGGGGCGGGGCTG CTATGTATCCAAGGAACCAGCTTCTCGTTTATCGGCCCGATTATCACGGCTGGTTTGGCGGGAGGGCTTCCCCTTATTTT CGGCGTTTGTATCGCCGCCTCTCCGGTAGAGATGATCGTGAGCCGTACTTTTAAGTATCTGCGCTCGGTGATTACTCCCT TGGTATCGGGTATCGTGGTGTTGCTCATCGGCTTGAGCTTGATCAAGGTAGGAGTGGTCGCTTGCGGCGGGGGGTATACG GCTATGGATAACGGTACGTTCGGTAGTTTGCGTAATATTGGGGTAGCTGTGTGCGTCTTGTTGAGTGTCTTGTTCTTCAA TCGTTGTAAGAACAAGTACTTGCGGATGAGTTCCATCGTACTGGGGTTGTGTATCGGTTATGCGATCGCTTTCGCCATGG GGATGGTGGATATGGAGGCTGTCTCCTCGCAAAACCTGAGAGGGTTTAATATCCCGGTTCCTTTCAAATATGGATTGGAT TTTAATATCTCTTCATTCGTGGCGATCGCATTGATCTATCTGATCACGGCGATCGAGGCTACGGGGGATATTACGGCCAA CTCGATGATATCGGGAAAATCGATCGAGGGAGAAGGGTACCTGAAGCGAGTCTCCGGCGGGGTGCTGGCGGATGGGGTGA ACTCGTTTATCTCCGGTGTTTTTAACTCTTTCCCGAACTCTATCTTCGCCCAGAATAACGGGATCATCCAGCTGACGGGA GTCGCCAGCCGGTACGTAGGGTATTATATCGCAGGTATGCTGATCCTGTTGGGATTATTCCCGGTTGTCGGCGTTATCTT CTCCTTGATGCCCGATCCGGTGCTGGGAGGGGCTACCCTGCTGATGTTCGGTACGGTGGCGGCGGCAGGTATCCGTATTA TCGCCGCCCAAGATATCAACCGGAAGGCCACGTTGGTGTTGGCGGTTAGTTTGTCCTTGGGGCTGGGGGTGGAGCTGATG CCGGATATTTTAGGGGCCGCCCCTCAGGTGATCCGTGGCATTTTCTCCTCCGGTATTACGACGGGGGGCTTGACGGCCAT TCTGGCGAATTTATTTATACGTGTAAAAGAAGATCAAACAGAATAA
Upstream 100 bases:
>100_bases CTACGGTGATGGTATTGCGGAAGAAAGGAAACGAGATGAGTGTACGGGTGTTGAACGCAAGAGGAGAGACCTTATTAGAC TTGAAATTATAAGAGACAGT
Downstream 100 bases:
>100_bases CAAATTATGGAATTATTGAAGCAACGCATCTTGCAAGACGGCCGCTGTTATCCCGGCGGTATCCTTAAAGTGGATAGTTT TATCAACCATCAAATGGACC
Product: putative purine permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 441; Mature: 441
Protein sequence:
>441_residues MDTDLIYGIDDRPPLKETLFAAIQHLLAIFVAIITPPLIIAGALKLDLETTGFLVSMALFASGVSTFVQCRKLGPVGAGL LCIQGTSFSFIGPIITAGLAGGLPLIFGVCIAASPVEMIVSRTFKYLRSVITPLVSGIVVLLIGLSLIKVGVVACGGGYT AMDNGTFGSLRNIGVAVCVLLSVLFFNRCKNKYLRMSSIVLGLCIGYAIAFAMGMVDMEAVSSQNLRGFNIPVPFKYGLD FNISSFVAIALIYLITAIEATGDITANSMISGKSIEGEGYLKRVSGGVLADGVNSFISGVFNSFPNSIFAQNNGIIQLTG VASRYVGYYIAGMLILLGLFPVVGVIFSLMPDPVLGGATLLMFGTVAAAGIRIIAAQDINRKATLVLAVSLSLGLGVELM PDILGAAPQVIRGIFSSGITTGGLTAILANLFIRVKEDQTE
Sequences:
>Translated_441_residues MDTDLIYGIDDRPPLKETLFAAIQHLLAIFVAIITPPLIIAGALKLDLETTGFLVSMALFASGVSTFVQCRKLGPVGAGL LCIQGTSFSFIGPIITAGLAGGLPLIFGVCIAASPVEMIVSRTFKYLRSVITPLVSGIVVLLIGLSLIKVGVVACGGGYT AMDNGTFGSLRNIGVAVCVLLSVLFFNRCKNKYLRMSSIVLGLCIGYAIAFAMGMVDMEAVSSQNLRGFNIPVPFKYGLD FNISSFVAIALIYLITAIEATGDITANSMISGKSIEGEGYLKRVSGGVLADGVNSFISGVFNSFPNSIFAQNNGIIQLTG VASRYVGYYIAGMLILLGLFPVVGVIFSLMPDPVLGGATLLMFGTVAAAGIRIIAAQDINRKATLVLAVSLSLGLGVELM PDILGAAPQVIRGIFSSGITTGGLTAILANLFIRVKEDQTE >Mature_441_residues MDTDLIYGIDDRPPLKETLFAAIQHLLAIFVAIITPPLIIAGALKLDLETTGFLVSMALFASGVSTFVQCRKLGPVGAGL LCIQGTSFSFIGPIITAGLAGGLPLIFGVCIAASPVEMIVSRTFKYLRSVITPLVSGIVVLLIGLSLIKVGVVACGGGYT AMDNGTFGSLRNIGVAVCVLLSVLFFNRCKNKYLRMSSIVLGLCIGYAIAFAMGMVDMEAVSSQNLRGFNIPVPFKYGLD FNISSFVAIALIYLITAIEATGDITANSMISGKSIEGEGYLKRVSGGVLADGVNSFISGVFNSFPNSIFAQNNGIIQLTG VASRYVGYYIAGMLILLGLFPVVGVIFSLMPDPVLGGATLLMFGTVAAAGIRIIAAQDINRKATLVLAVSLSLGLGVELM PDILGAAPQVIRGIFSSGITTGGLTAILANLFIRVKEDQTE
Specific function: Specific, proton motive force-dependent high-affinity transporter for xanthine [H]
COG id: COG2233
COG function: function code F; Xanthine/uracil permeases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the xanthine/uracil permease family. Nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) subfamily [H]
Homologues:
Organism=Homo sapiens, GI44680148, Length=504, Percent_Identity=23.4126984126984, Blast_Score=90, Evalue=5e-18, Organism=Homo sapiens, GI40316845, Length=504, Percent_Identity=23.4126984126984, Blast_Score=90, Evalue=5e-18, Organism=Homo sapiens, GI44680145, Length=483, Percent_Identity=23.6024844720497, Blast_Score=80, Evalue=5e-15, Organism=Homo sapiens, GI44680143, Length=487, Percent_Identity=23.4086242299795, Blast_Score=78, Evalue=1e-14, Organism=Escherichia coli, GI1790087, Length=446, Percent_Identity=50.2242152466368, Blast_Score=437, Evalue=1e-124, Organism=Escherichia coli, GI87082178, Length=440, Percent_Identity=49.3181818181818, Blast_Score=371, Evalue=1e-104, Organism=Escherichia coli, GI87082181, Length=425, Percent_Identity=31.0588235294118, Blast_Score=187, Evalue=9e-49, Organism=Escherichia coli, GI1788843, Length=397, Percent_Identity=29.9748110831234, Blast_Score=110, Evalue=3e-25, Organism=Escherichia coli, GI87081818, Length=405, Percent_Identity=24.9382716049383, Blast_Score=82, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17558856, Length=404, Percent_Identity=23.7623762376238, Blast_Score=74, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006042 - InterPro: IPR006043 [H]
Pfam domain/function: PF00860 Xan_ur_permease [H]
EC number: NA
Molecular weight: Translated: 46074; Mature: 46074
Theoretical pI: Translated: 8.01; Mature: 8.01
Prosite motif: PS01116 XANTH_URACIL_PERMASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTDLIYGIDDRPPLKETLFAAIQHLLAIFVAIITPPLIIAGALKLDLETTGFLVSMALF CCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEECCCHHHHHHHHHHH ASGVSTFVQCRKLGPVGAGLLCIQGTSFSFIGPIITAGLAGGLPLIFGVCIAASPVEMIV HHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHH SRTFKYLRSVITPLVSGIVVLLIGLSLIKVGVVACGGGYTAMDNGTFGSLRNIGVAVCVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEECCCCCCHHHHHHHHHHHHH LSVLFFNRCKNKYLRMSSIVLGLCIGYAIAFAMGMVDMEAVSSQNLRGFNIPVPFKYGLD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCC FNISSFVAIALIYLITAIEATGDITANSMISGKSIEGEGYLKRVSGGVLADGVNSFISGV CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHH FNSFPNSIFAQNNGIIQLTGVASRYVGYYIAGMLILLGLFPVVGVIFSLMPDPVLGGATL HHHCCCCEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH LMFGTVAAAGIRIIAAQDINRKATLVLAVSLSLGLGVELMPDILGAAPQVIRGIFSSGIT HHHHHHHHHCEEEEEECCCCCCEEEEEEEEHHHCCCHHHHHHHHCCCHHHHHHHHHCCCC TGGLTAILANLFIRVKEDQTE CCHHHHHHHHHHEEECCCCCC >Mature Secondary Structure MDTDLIYGIDDRPPLKETLFAAIQHLLAIFVAIITPPLIIAGALKLDLETTGFLVSMALF CCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEECCCHHHHHHHHHHH ASGVSTFVQCRKLGPVGAGLLCIQGTSFSFIGPIITAGLAGGLPLIFGVCIAASPVEMIV HHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHH SRTFKYLRSVITPLVSGIVVLLIGLSLIKVGVVACGGGYTAMDNGTFGSLRNIGVAVCVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEECCCCCCHHHHHHHHHHHHH LSVLFFNRCKNKYLRMSSIVLGLCIGYAIAFAMGMVDMEAVSSQNLRGFNIPVPFKYGLD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCC FNISSFVAIALIYLITAIEATGDITANSMISGKSIEGEGYLKRVSGGVLADGVNSFISGV CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHH FNSFPNSIFAQNNGIIQLTGVASRYVGYYIAGMLILLGLFPVVGVIFSLMPDPVLGGATL HHHCCCCEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH LMFGTVAAAGIRIIAAQDINRKATLVLAVSLSLGLGVELMPDILGAAPQVIRGIFSSGIT HHHHHHHHHCEEEEEECCCCCCEEEEEEEEHHHCCCHHHHHHHHCCCHHHHHHHHHCCCC TGGLTAILANLFIRVKEDQTE CCHHHHHHHHHHEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]