Definition Parabacteroides distasonis ATCC 8503 chromosome, complete genome.
Accession NC_009615
Length 4,811,379

Click here to switch to the map view.

The map label for this gene is 150008043

Identifier: 150008043

GI number: 150008043

Start: 1633510

End: 1634601

Strand: Reverse

Name: 150008043

Synonym: BDI_1406

Alternate gene names: NA

Gene position: 1634601-1633510 (Counterclockwise)

Preceding gene: 150008044

Following gene: 150008040

Centisome position: 33.97

GC content: 33.42

Gene sequence:

>1092_bases
ATGAAATATATAACAATCATTGGTACGGTTGGAGTACCTGCTAATTATGGAGGTTTTGAAACCTTAGTCGAAAATGTGAT
AGGTGAAAATGCTTCTAAGGATGGGAATTATACGGTATATTGTAGTAGTAAAAGTTATCCTAAGAGGCTTAGTTTGTATA
AAGGTGCTTCGTTAAAGTATATTCCTTTAGATGCTAATGGCATTCAAAGTATCTTTTATGATATTTTGTCTTTGATTCAA
GCTACACGGAGAAGTGATGTTGTTCTGATATTAGGTGTCTCTGGATGTTGCTTTTTACCCATTTATCGTTTGTTCTCAAA
AAAGAAATTGATAATTAATATTGATGGATTGGAACACCGAAGAAATAAATGGGGAAAGTGGACACGGCGATTCTTGAGGT
TCTCAGAAAAAATGGCTGTGAAATATGCAGATGTAGTGGTGGCCGATAATAAGGGAATTCAAGATTATGTATTAGAAGAG
TATGGTAAACAGGCTGAGTTGATTGCTTATGGTGGTGATCATGTTTTGTGTGACGTTTCTGATATAGAAGATGAAGTATT
AGAGCAATATGGTCTAAAAGATGTAGATTATTCTTTTTCGTTATGCAGAATAGAGCCGGAAAATAACGTACATATAACAT
TGGAAGCTTTTAAACGGACTGGGAAAGAATTGTTTTTTATAGGAAATTGGGAAAGAAGTTCGTATGGAAAGATGCTAAAA
GATAAATATGGTGATTGTGAAAATATCCATTTACTTTCCCCAATATATGATGTGAAGGTGTTGAATGTTCTTAGAAGCCA
TTGTTGCTATTATATTCACGGACATAGTGCAGGTGGTACCAATCCGTCTTTGGTGGAAGCAATGTTTTTTAATAAACCGA
TATTGGCTTATGATGTGATTTATAATAGAGAGACAACGGAAAATAAGGCGGATTATTTTTCTTCTGTAGAAGATCTTGTG
AATTTATTGAAAATGCCTGATTCTTATTATGTTTTAAATGCAGAAAATATGATGGAAATAGCTCAAAGATGTTATCGATG
GATAATGATAACAAAACAATATGAGCGTTTATATGGCGTATCTGCAAAATAA

Upstream 100 bases:

>100_bases
TAAACTATATAATCGTATTAAGAAGCGGTTGAAAAAATTATTTTTTTAGTGTATAGTGGTTGATTTTGCTATGATAATGT
GTGTATAATAAGTTGTTTAC

Downstream 100 bases:

>100_bases
ATTATTATGCCGTTAATTGAAGATTTTGGCATGTTGATTTATACTGTCCTTCCAAATAGATATTCTCTCCTTTGCAATTC
ATAAATGTATGATGGACTCT

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Rhamnosyltransferase; Glycosyl Transferase; Glycosyltransferase RfaG; Glycosyl Transferase Group 1 Family Protein; Polysaccharide Biosynthesis Protein/ Rhamnosyl Transferase; Glycosyltransferase Protein; Group 1 Glycosyl Transferase; Rhamnosyl Transferase; Glycosyl Transferase Family Protein; Rhamnosyl Transferase WchF; Glycosyl-(Rhamnosyl) Transferase; Capsular Polysaccharide Bisynthesis Glycosyl Transferase; Glycosyltransferase-Like Protein; Alpha-D-GlcNAc Alpha-1 2-L-Rhamnosyltransferase; Glycosyltransferase Family 4 Protein; Alpha-(1 2)-Rhamnosyltransferase; A-Glycosyltransferase; Rhamnosyltransferase RgpA; Glycosyl Transferase GT4 Family Protein; Polysaccharide Export Protein

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MKYITIIGTVGVPANYGGFETLVENVIGENASKDGNYTVYCSSKSYPKRLSLYKGASLKYIPLDANGIQSIFYDILSLIQ
ATRRSDVVLILGVSGCCFLPIYRLFSKKKLIINIDGLEHRRNKWGKWTRRFLRFSEKMAVKYADVVVADNKGIQDYVLEE
YGKQAELIAYGGDHVLCDVSDIEDEVLEQYGLKDVDYSFSLCRIEPENNVHITLEAFKRTGKELFFIGNWERSSYGKMLK
DKYGDCENIHLLSPIYDVKVLNVLRSHCCYYIHGHSAGGTNPSLVEAMFFNKPILAYDVIYNRETTENKADYFSSVEDLV
NLLKMPDSYYVLNAENMMEIAQRCYRWIMITKQYERLYGVSAK

Sequences:

>Translated_363_residues
MKYITIIGTVGVPANYGGFETLVENVIGENASKDGNYTVYCSSKSYPKRLSLYKGASLKYIPLDANGIQSIFYDILSLIQ
ATRRSDVVLILGVSGCCFLPIYRLFSKKKLIINIDGLEHRRNKWGKWTRRFLRFSEKMAVKYADVVVADNKGIQDYVLEE
YGKQAELIAYGGDHVLCDVSDIEDEVLEQYGLKDVDYSFSLCRIEPENNVHITLEAFKRTGKELFFIGNWERSSYGKMLK
DKYGDCENIHLLSPIYDVKVLNVLRSHCCYYIHGHSAGGTNPSLVEAMFFNKPILAYDVIYNRETTENKADYFSSVEDLV
NLLKMPDSYYVLNAENMMEIAQRCYRWIMITKQYERLYGVSAK
>Mature_363_residues
MKYITIIGTVGVPANYGGFETLVENVIGENASKDGNYTVYCSSKSYPKRLSLYKGASLKYIPLDANGIQSIFYDILSLIQ
ATRRSDVVLILGVSGCCFLPIYRLFSKKKLIINIDGLEHRRNKWGKWTRRFLRFSEKMAVKYADVVVADNKGIQDYVLEE
YGKQAELIAYGGDHVLCDVSDIEDEVLEQYGLKDVDYSFSLCRIEPENNVHITLEAFKRTGKELFFIGNWERSSYGKMLK
DKYGDCENIHLLSPIYDVKVLNVLRSHCCYYIHGHSAGGTNPSLVEAMFFNKPILAYDVIYNRETTENKADYFSSVEDLV
NLLKMPDSYYVLNAENMMEIAQRCYRWIMITKQYERLYGVSAK

Specific function: Unknown

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41656; Mature: 41656

Theoretical pI: Translated: 7.11; Mature: 7.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYITIIGTVGVPANYGGFETLVENVIGENASKDGNYTVYCSSKSYPKRLSLYKGASLKY
CEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHCCCCCEEE
IPLDANGIQSIFYDILSLIQATRRSDVVLILGVSGCCFLPIYRLFSKKKLIINIDGLEHR
EECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCEEEEEECCCHHH
RNKWGKWTRRFLRFSEKMAVKYADVVVADNKGIQDYVLEEYGKQAELIAYGGDHVLCDVS
HHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCHHHHHHHHCCCEEEEEECCCEEEEEHH
DIEDEVLEQYGLKDVDYSFSLCRIEPENNVHITLEAFKRTGKELFFIGNWERSSYGKMLK
HHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEHHHHHCCCEEEEEECCCCHHHHHHHH
DKYGDCENIHLLSPIYDVKVLNVLRSHCCYYIHGHSAGGTNPSLVEAMFFNKPILAYDVI
HHCCCCCCEEEECCHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHCCCEEEEEEE
YNRETTENKADYFSSVEDLVNLLKMPDSYYVLNAENMMEIAQRCYRWIMITKQYERLYGV
ECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCC
SAK
CCC
>Mature Secondary Structure
MKYITIIGTVGVPANYGGFETLVENVIGENASKDGNYTVYCSSKSYPKRLSLYKGASLKY
CEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHCCCCCEEE
IPLDANGIQSIFYDILSLIQATRRSDVVLILGVSGCCFLPIYRLFSKKKLIINIDGLEHR
EECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCEEEEEECCCHHH
RNKWGKWTRRFLRFSEKMAVKYADVVVADNKGIQDYVLEEYGKQAELIAYGGDHVLCDVS
HHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCHHHHHHHHCCCEEEEEECCCEEEEEHH
DIEDEVLEQYGLKDVDYSFSLCRIEPENNVHITLEAFKRTGKELFFIGNWERSSYGKMLK
HHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEHHHHHCCCEEEEEECCCCHHHHHHHH
DKYGDCENIHLLSPIYDVKVLNVLRSHCCYYIHGHSAGGTNPSLVEAMFFNKPILAYDVI
HHCCCCCCEEEECCHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHCCCEEEEEEE
YNRETTENKADYFSSVEDLVNLLKMPDSYYVLNAENMMEIAQRCYRWIMITKQYERLYGV
ECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCC
SAK
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA