| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
Click here to switch to the map view.
The map label for this gene is 150006225
Identifier: 150006225
GI number: 150006225
Start: 4611581
End: 4611955
Strand: Direct
Name: 150006225
Synonym: BVU_3736
Alternate gene names: NA
Gene position: 4611581-4611955 (Clockwise)
Preceding gene: 150006224
Following gene: 150006226
Centisome position: 89.32
GC content: 37.33
Gene sequence:
>375_bases ATGATGAAGATGAAATTAAATTTCGAGGAATTACCTCAAGCCACAGCTTTTCTATTGGAGAAGGTGGAAGAACTGACGAT TTCTATTAATGAGATGAAGCAGTTATTAAAGAGACAGACAGCAGCAAAGGAAGAAATGATTGGTATTAACGAGGCTTGTG AGATACTCAGCCTTGCTAAGCCAACGGTTTATGCTCTTGTTCAGGCAAATAAAATCCCCTATTATCAACCTGGGAAAATG CTTAAATTCAAACGTACCGAACTTATGGAGTGGATGGAAAAAAGCAGGAAAAAACCGATTGACAAAGAGAGCCTATACAA AGAGATACAAAAAGGAGTAAAACATAAACCAAAATCAGGATGGGAGGAATTTTAG
Upstream 100 bases:
>100_bases AAAGATTAATATAGAAAAAACATTACTATCCATTGGTTAACTTATAATCCACCAGTTAACCAATAATACACCATCTTTCT TTGCTGAAAATCAATTTAAA
Downstream 100 bases:
>100_bases ATATGGGAAAAATTGAAATGACAGATGAATACGTAAGAGTTGGTACCACACTCTATAAAATAGTTTTTCAGCCTCTTATT AATGGCACATTTGCCAAGCG
Product: excisionase
Products: NA
Alternate protein names: Mobilizable Transposon Xis Protein; Excisionase; Excisionase In Mobilizable Transposon Xis Protein
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MMKMKLNFEELPQATAFLLEKVEELTISINEMKQLLKRQTAAKEEMIGINEACEILSLAKPTVYALVQANKIPYYQPGKM LKFKRTELMEWMEKSRKKPIDKESLYKEIQKGVKHKPKSGWEEF
Sequences:
>Translated_124_residues MMKMKLNFEELPQATAFLLEKVEELTISINEMKQLLKRQTAAKEEMIGINEACEILSLAKPTVYALVQANKIPYYQPGKM LKFKRTELMEWMEKSRKKPIDKESLYKEIQKGVKHKPKSGWEEF >Mature_124_residues MMKMKLNFEELPQATAFLLEKVEELTISINEMKQLLKRQTAAKEEMIGINEACEILSLAKPTVYALVQANKIPYYQPGKM LKFKRTELMEWMEKSRKKPIDKESLYKEIQKGVKHKPKSGWEEF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14583; Mature: 14583
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 6.5 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 6.5 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKMKLNFEELPQATAFLLEKVEELTISINEMKQLLKRQTAAKEEMIGINEACEILSLAK CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCC PTVYALVQANKIPYYQPGKMLKFKRTELMEWMEKSRKKPIDKESLYKEIQKGVKHKPKSG HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC WEEF CCCC >Mature Secondary Structure MMKMKLNFEELPQATAFLLEKVEELTISINEMKQLLKRQTAAKEEMIGINEACEILSLAK CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCC PTVYALVQANKIPYYQPGKMLKFKRTELMEWMEKSRKKPIDKESLYKEIQKGVKHKPKSG HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC WEEF CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA