| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is 150006224
Identifier: 150006224
GI number: 150006224
Start: 4610701
End: 4611489
Strand: Direct
Name: 150006224
Synonym: BVU_3735
Alternate gene names: NA
Gene position: 4610701-4611489 (Clockwise)
Preceding gene: 150006220
Following gene: 150006225
Centisome position: 89.3
GC content: 31.05
Gene sequence:
>789_bases ATGAAAAGATTAAATTTATTCCATTTTGCTGTAATATATGTAACTGCAATATGTTCAATTACCTCAATTCCCAGATATCT GATATTGAAAGGAAACTCTCCACATAGTCTGGACCTTGTATTATACTCACTCTTCACTACCCTACTTTTTATTACAATCA TATTTATGATTGAAACAGCTTACTGTAAATATATTGTACCTACAATATGTAATCTTATTGATGTAGTACAAGATCAAAGA AGTAAAAGGATTAACAAAATACAGGGAAATACGAAAAGTAATGGTAGACTATCGATGAAACTATTTCATAAAACCATTGA TGATGATAAAGAAAAGACAGATAATTCTATATTGTACTCTCATGAGGAAGAAGTAAGATTGGATAGAGAACGTATCAAAA AAGAAAAAGATGATACAATAAAAGAAGTCATGTCTTATTTTGAAGCTACTTTCAAAAATATACTGACAAGCAATGAAATG AGTGTCATGAAAGAAAATATTATGGCCTTAAACAATAAAACAGAAATAAAGACAGCTGTATTACGTCGTTTGAATGGAGT TACATCAAAAGATTTATACCATTTAGCTAGAAATATCGGGAAACGGTTAGGATGCTCAAACATGCAAATAGCACATTTCA TCAAAAAAAGTTTTCAGCTCATGCTTGAAGATACTGAGATACTGACCATTTCAAGCAAACTCACCTGTAATGAAGGCCGG TTTACTATAAAAATTATTCCTATCGGAACACCGCTCGTTGCACAGTCTCTTCCCTTTTCAAAAGATTAA
Upstream 100 bases:
>100_bases ATATTATATTAAAAACCAGACATTTTGTAATCATTTCCTTTAATTTCTGATACTTCAAAAATATATTTGCATCAAAATCA ATAACAAAAAATCATTAATT
Downstream 100 bases:
>100_bases TATAGAAAAAACATTACTATCCATTGGTTAACTTATAATCCACCAGTTAACCAATAATACACCATCTTTCTTTGCTGAAA ATCAATTTAAAATGATGAAG
Product: putative mobilizable transposon, TnpC protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MKRLNLFHFAVIYVTAICSITSIPRYLILKGNSPHSLDLVLYSLFTTLLFITIIFMIETAYCKYIVPTICNLIDVVQDQR SKRINKIQGNTKSNGRLSMKLFHKTIDDDKEKTDNSILYSHEEEVRLDRERIKKEKDDTIKEVMSYFEATFKNILTSNEM SVMKENIMALNNKTEIKTAVLRRLNGVTSKDLYHLARNIGKRLGCSNMQIAHFIKKSFQLMLEDTEILTISSKLTCNEGR FTIKIIPIGTPLVAQSLPFSKD
Sequences:
>Translated_262_residues MKRLNLFHFAVIYVTAICSITSIPRYLILKGNSPHSLDLVLYSLFTTLLFITIIFMIETAYCKYIVPTICNLIDVVQDQR SKRINKIQGNTKSNGRLSMKLFHKTIDDDKEKTDNSILYSHEEEVRLDRERIKKEKDDTIKEVMSYFEATFKNILTSNEM SVMKENIMALNNKTEIKTAVLRRLNGVTSKDLYHLARNIGKRLGCSNMQIAHFIKKSFQLMLEDTEILTISSKLTCNEGR FTIKIIPIGTPLVAQSLPFSKD >Mature_262_residues MKRLNLFHFAVIYVTAICSITSIPRYLILKGNSPHSLDLVLYSLFTTLLFITIIFMIETAYCKYIVPTICNLIDVVQDQR SKRINKIQGNTKSNGRLSMKLFHKTIDDDKEKTDNSILYSHEEEVRLDRERIKKEKDDTIKEVMSYFEATFKNILTSNEM SVMKENIMALNNKTEIKTAVLRRLNGVTSKDLYHLARNIGKRLGCSNMQIAHFIKKSFQLMLEDTEILTISSKLTCNEGR FTIKIIPIGTPLVAQSLPFSKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30168; Mature: 30168
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLNLFHFAVIYVTAICSITSIPRYLILKGNSPHSLDLVLYSLFTTLLFITIIFMIETA CCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH YCKYIVPTICNLIDVVQDQRSKRINKIQGNTKSNGRLSMKLFHKTIDDDKEKTDNSILYS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHCCCHHHCCCCEEEC HEEEVRLDRERIKKEKDDTIKEVMSYFEATFKNILTSNEMSVMKENIMALNNKTEIKTAV CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHH LRRLNGVTSKDLYHLARNIGKRLGCSNMQIAHFIKKSFQLMLEDTEILTISSKLTCNEGR HHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCEEECCCE FTIKIIPIGTPLVAQSLPFSKD EEEEEEECCCHHHHHCCCCCCC >Mature Secondary Structure MKRLNLFHFAVIYVTAICSITSIPRYLILKGNSPHSLDLVLYSLFTTLLFITIIFMIETA CCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH YCKYIVPTICNLIDVVQDQRSKRINKIQGNTKSNGRLSMKLFHKTIDDDKEKTDNSILYS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHCCCHHHCCCCEEEC HEEEVRLDRERIKKEKDDTIKEVMSYFEATFKNILTSNEMSVMKENIMALNNKTEIKTAV CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHH LRRLNGVTSKDLYHLARNIGKRLGCSNMQIAHFIKKSFQLMLEDTEILTISSKLTCNEGR HHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCEEECCCE FTIKIIPIGTPLVAQSLPFSKD EEEEEEECCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA