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The map label for this gene is ytsP [H]

Identifier: 150006139

GI number: 150006139

Start: 4517785

End: 4518270

Strand: Direct

Name: ytsP [H]

Synonym: BVU_3650

Alternate gene names: 150006139

Gene position: 4517785-4518270 (Clockwise)

Preceding gene: 150006138

Following gene: 150006140

Centisome position: 87.5

GC content: 39.51

Gene sequence:

>486_bases
ATGGAAACCAGTTTCAAACAAACAACTAGTAATAAAGTAGAACGTTACCGTCTTTTCCTCCCTCAGTTTGAACTTTTAAT
ATCAGATGAAAAAGAAGAAATAAGTGTTTTGGCCAATACTGCTGCTGCTCTTCGGGAAGCCTTCGGCTTTTTTTGGGTAG
GTTTCTATCTGGTTAAAGACGACCAACTTATTTTAGGACCTTTTCAGGGAAGCACCGCCTGTTATCGCATCCATAAAGGA
AAGGGAGTATGTGGGACCTCATGGGCAGAAGCCCGAACCTTGATAGTGCCCAATGTAGAACAATTCCCCGGACATATAGC
CTGCAGTTCTCTTTCCCGCTCTGAAATTGTTGTTCCTATTCTTGCTAATGGACAAGTAAAGGGAGTATTGGATATTGACA
GTAATCTATTAAACTTTTTTGATGAAACAGACCGCCGTTATTTAGAAGAAGTAACAGCCATTGTAGCTAAAACATTATAT
TATTAA

Upstream 100 bases:

>100_bases
AATAAGCCAACTCTTTTTACCTAACAGGGGACATCGCTTCATAGAAGACCATTTTTTGTAAAAAAACAACAAGATGTCCC
CTCATAAAACAAATAAAAAT

Downstream 100 bases:

>100_bases
CCAAATGAAAATGATAAACCAAGATACAATCTGTGCCATTGCCACCGCCCAGGGAGGAGCCATCGGAATAATTCGTGTAT
CTGGCCCAAAAGCGATTGAA

Product: GAF domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
METSFKQTTSNKVERYRLFLPQFELLISDEKEEISVLANTAAALREAFGFFWVGFYLVKDDQLILGPFQGSTACYRIHKG
KGVCGTSWAEARTLIVPNVEQFPGHIACSSLSRSEIVVPILANGQVKGVLDIDSNLLNFFDETDRRYLEEVTAIVAKTLY
Y

Sequences:

>Translated_161_residues
METSFKQTTSNKVERYRLFLPQFELLISDEKEEISVLANTAAALREAFGFFWVGFYLVKDDQLILGPFQGSTACYRIHKG
KGVCGTSWAEARTLIVPNVEQFPGHIACSSLSRSEIVVPILANGQVKGVLDIDSNLLNFFDETDRRYLEEVTAIVAKTLY
Y
>Mature_161_residues
METSFKQTTSNKVERYRLFLPQFELLISDEKEEISVLANTAAALREAFGFFWVGFYLVKDDQLILGPFQGSTACYRIHKG
KGVCGTSWAEARTLIVPNVEQFPGHIACSSLSRSEIVVPILANGQVKGVLDIDSNLLNFFDETDRRYLEEVTAIVAKTLY
Y

Specific function: Unknown

COG id: COG1956

COG function: function code T; GAF domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the free Met sulfoxide reductase family [H]

Homologues:

Organism=Escherichia coli, GI171474009, Length=150, Percent_Identity=44, Blast_Score=127, Evalue=4e-31,
Organism=Saccharomyces cerevisiae, GI6322781, Length=160, Percent_Identity=38.75, Blast_Score=116, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003018
- InterPro:   IPR000614 [H]

Pfam domain/function: PF01590 GAF [H]

EC number: NA

Molecular weight: Translated: 18138; Mature: 18138

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METSFKQTTSNKVERYRLFLPQFELLISDEKEEISVLANTAAALREAFGFFWVGFYLVKD
CCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEC
DQLILGPFQGSTACYRIHKGKGVCGTSWAEARTLIVPNVEQFPGHIACSSLSRSEIVVPI
CEEEEECCCCCCEEEEEECCCCCCCCCHHHCEEEECCCHHHCCCEEEECCCCCCCEEEEE
LANGQVKGVLDIDSNLLNFFDETDRRYLEEVTAIVAKTLYY
ECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
METSFKQTTSNKVERYRLFLPQFELLISDEKEEISVLANTAAALREAFGFFWVGFYLVKD
CCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEC
DQLILGPFQGSTACYRIHKGKGVCGTSWAEARTLIVPNVEQFPGHIACSSLSRSEIVVPI
CEEEEECCCCCCEEEEEECCCCCCCCCHHHCEEEECCCHHHCCCEEEECCCCCCCEEEEE
LANGQVKGVLDIDSNLLNFFDETDRRYLEEVTAIVAKTLYY
ECCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]