Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
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Accession | NC_009614 |
Length | 5,163,189 |
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The map label for this gene is 150006090
Identifier: 150006090
GI number: 150006090
Start: 4465019
End: 4466308
Strand: Direct
Name: 150006090
Synonym: BVU_3599
Alternate gene names: NA
Gene position: 4465019-4466308 (Clockwise)
Preceding gene: 150006089
Following gene: 150006091
Centisome position: 86.48
GC content: 44.03
Gene sequence:
>1290_bases ATGAAAAGAATTAATATACTGTTTATCTTTATTTTTAGTGTTCCGTCCGCAACTTTCTCCCAACAAAGTGATTTATTGGA AAAGTACAGGTCGATGGCTGTGGAATACAACCACGACCTGAAGGCGGCGGATAAACACATCTCTGCAAGTATCGAACTGG AAAAAGCCGCCCGAAAAGATTTGCGTCCCAAACTTTCGGGTGACGCCAACTTTCAATATACCGGCAACCCCATCCAGCTC ACTCTGGACTTGCCCAGTATGCAAAACCCACTGACGTTCGAAGGCAAGGACATGAAATATGGTGCCTCACTTACCCTATT ACAGCCGGTCTATACAGGCGGGCGTCTGCTGGAAACCATCCGGATGGCAAAACATCAACATAGTCTGGCAGCACATCAGG CGGAATACTTTCGTTCCGCCCTGTGCTACCAAACCGATATGCAATACTGGAATACCGTAGCCCGTGCCGAACTTCTGCAA GTTGCTACCGACTATCGAAACTCTATCGCCTCACTCACCAAAACTATCCGTGAGCGAGTCGAAGCAGGACTAGTTGACCC GCAAGACTTGCTTATGGCAGAAGTAAAACTAAATGAAGCCGAATACCAATTGCTCCAAGCAAAAAGCAGTTTGGAAACAG GAAGAATGGCACTTAATTCACTGATTGGCACGGCATTTCATGAAATAACGGAAGTGGAAGATACCATTCCTTCCATCGTA ATGAATGAGCAGTTATGGAAGCAAGACGGTTCTAACCGACCGGAACTAAAAATAGCATACGACCAAATAGGCATAGCCGA AAGCTCAAAGAAACTGACTGACTCAAAATATAAACCGCAACTGTATGTCGACATAGAAGGAAGTTACTCTTCACCAGGAT ATAACTTTAAATCCGACCTTGATCCCAACTATGCCGTTTATGCTAAGTTATCTGTACCTATTTTTGAATGGGGGAAACGA CGCAACGAAAAACGGGCAGCCTCTTTCCAGATCGGTGCCGCGACTGATAATCTGCACCAAGTAAGTGACCATGTAAATCT GGAAGTGCAGACAGCCCGTGTATCCTTGTCTCAAGCAATGGAACAAGTACAATTAACTAGAAACTCATTGGAAAAAGCCC GCAAAAACGAACAAATGGCATTGGAAAGATATACAGAAGGGAAAGTATCAATAGTGGAAATGATAGAGGCACAAAACTAT CGGCAGATTTCACAAACCAACTATGTACAAGCCAAAGTTTCTGCACAAGGACACTATTCCGCATTGCTGAAAGCTTTAAA CAAATATTAG
Upstream 100 bases:
>100_bases ATTTTCGGACTGACGTTTGCCACATTGCTAACGTTATTCGTAACCCCGGCATTATATGCCATGTTTTATAAAATTAAGAG TAATTCTAAATATGCATCCT
Downstream 100 bases:
>100_bases ATAAAACCAACCATCATGAAAAGCATATTCTTCCATTCACCAAGGAACGGAATTTATCCGTACCTATAGTGAATGGAAAA TATTAATTTAACACCTCTCC
Product: outer membrane protein
Products: NA
Alternate protein names: Outer Membrane Protein; Outer Membrane Macrolide Efflux Protein; Acriflavin Resistance Protein; Outer Membrane Protein-Like; RND Family Efflux Pump Outer Membrane Protein; Type I Secretion Outer Membrane Protein
Number of amino acids: Translated: 429; Mature: 429
Protein sequence:
>429_residues MKRINILFIFIFSVPSATFSQQSDLLEKYRSMAVEYNHDLKAADKHISASIELEKAARKDLRPKLSGDANFQYTGNPIQL TLDLPSMQNPLTFEGKDMKYGASLTLLQPVYTGGRLLETIRMAKHQHSLAAHQAEYFRSALCYQTDMQYWNTVARAELLQ VATDYRNSIASLTKTIRERVEAGLVDPQDLLMAEVKLNEAEYQLLQAKSSLETGRMALNSLIGTAFHEITEVEDTIPSIV MNEQLWKQDGSNRPELKIAYDQIGIAESSKKLTDSKYKPQLYVDIEGSYSSPGYNFKSDLDPNYAVYAKLSVPIFEWGKR RNEKRAASFQIGAATDNLHQVSDHVNLEVQTARVSLSQAMEQVQLTRNSLEKARKNEQMALERYTEGKVSIVEMIEAQNY RQISQTNYVQAKVSAQGHYSALLKALNKY
Sequences:
>Translated_429_residues MKRINILFIFIFSVPSATFSQQSDLLEKYRSMAVEYNHDLKAADKHISASIELEKAARKDLRPKLSGDANFQYTGNPIQL TLDLPSMQNPLTFEGKDMKYGASLTLLQPVYTGGRLLETIRMAKHQHSLAAHQAEYFRSALCYQTDMQYWNTVARAELLQ VATDYRNSIASLTKTIRERVEAGLVDPQDLLMAEVKLNEAEYQLLQAKSSLETGRMALNSLIGTAFHEITEVEDTIPSIV MNEQLWKQDGSNRPELKIAYDQIGIAESSKKLTDSKYKPQLYVDIEGSYSSPGYNFKSDLDPNYAVYAKLSVPIFEWGKR RNEKRAASFQIGAATDNLHQVSDHVNLEVQTARVSLSQAMEQVQLTRNSLEKARKNEQMALERYTEGKVSIVEMIEAQNY RQISQTNYVQAKVSAQGHYSALLKALNKY >Mature_429_residues MKRINILFIFIFSVPSATFSQQSDLLEKYRSMAVEYNHDLKAADKHISASIELEKAARKDLRPKLSGDANFQYTGNPIQL TLDLPSMQNPLTFEGKDMKYGASLTLLQPVYTGGRLLETIRMAKHQHSLAAHQAEYFRSALCYQTDMQYWNTVARAELLQ VATDYRNSIASLTKTIRERVEAGLVDPQDLLMAEVKLNEAEYQLLQAKSSLETGRMALNSLIGTAFHEITEVEDTIPSIV MNEQLWKQDGSNRPELKIAYDQIGIAESSKKLTDSKYKPQLYVDIEGSYSSPGYNFKSDLDPNYAVYAKLSVPIFEWGKR RNEKRAASFQIGAATDNLHQVSDHVNLEVQTARVSLSQAMEQVQLTRNSLEKARKNEQMALERYTEGKVSIVEMIEAQNY RQISQTNYVQAKVSAQGHYSALLKALNKY
Specific function: Unknown
COG id: COG1538
COG function: function code MU; Outer membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48621; Mature: 48621
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRINILFIFIFSVPSATFSQQSDLLEKYRSMAVEYNHDLKAADKHISASIELEKAARKD CCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCEEEHHHHHHHC LRPKLSGDANFQYTGNPIQLTLDLPSMQNPLTFEGKDMKYGASLTLLQPVYTGGRLLETI CCCCCCCCCCEEEECCEEEEEEECCCCCCCCEECCCCCCCCCCEEEEHHHHCCHHHHHHH RMAKHQHSLAAHQAEYFRSALCYQTDMQYWNTVARAELLQVATDYRNSIASLTKTIRERV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAGLVDPQDLLMAEVKLNEAEYQLLQAKSSLETGRMALNSLIGTAFHEITEVEDTIPSIV HHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MNEQLWKQDGSNRPELKIAYDQIGIAESSKKLTDSKYKPQLYVDIEGSYSSPGYNFKSDL HHHHHHHCCCCCCCCEEEEHHHHCCCCCCHHHCCCCCCCEEEEEEECCCCCCCCCCCCCC DPNYAVYAKLSVPIFEWGKRRNEKRAASFQIGAATDNLHQVSDHVNLEVQTARVSLSQAM CCCEEEEEEECCCHHHHHHCCCCHHHHEEEEECCCCHHHHHHHHCCEEEEHHHHHHHHHH EQVQLTRNSLEKARKNEQMALERYTEGKVSIVEMIEAQNYRQISQTNYVQAKVSAQGHYS HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHCCEEEEEECCCCHHH ALLKALNKY HHHHHHHCC >Mature Secondary Structure MKRINILFIFIFSVPSATFSQQSDLLEKYRSMAVEYNHDLKAADKHISASIELEKAARKD CCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCEEEHHHHHHHC LRPKLSGDANFQYTGNPIQLTLDLPSMQNPLTFEGKDMKYGASLTLLQPVYTGGRLLETI CCCCCCCCCCEEEECCEEEEEEECCCCCCCCEECCCCCCCCCCEEEEHHHHCCHHHHHHH RMAKHQHSLAAHQAEYFRSALCYQTDMQYWNTVARAELLQVATDYRNSIASLTKTIRERV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAGLVDPQDLLMAEVKLNEAEYQLLQAKSSLETGRMALNSLIGTAFHEITEVEDTIPSIV HHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MNEQLWKQDGSNRPELKIAYDQIGIAESSKKLTDSKYKPQLYVDIEGSYSSPGYNFKSDL HHHHHHHCCCCCCCCEEEEHHHHCCCCCCHHHCCCCCCCEEEEEEECCCCCCCCCCCCCC DPNYAVYAKLSVPIFEWGKRRNEKRAASFQIGAATDNLHQVSDHVNLEVQTARVSLSQAM CCCEEEEEEECCCHHHHHHCCCCHHHHEEEEECCCCHHHHHHHHCCEEEEHHHHHHHHHH EQVQLTRNSLEKARKNEQMALERYTEGKVSIVEMIEAQNYRQISQTNYVQAKVSAQGHYS HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHCCEEEEEECCCCHHH ALLKALNKY HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA