Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
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Accession | NC_009614 |
Length | 5,163,189 |
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The map label for this gene is crp [C]
Identifier: 150006071
GI number: 150006071
Start: 4443344
End: 4444045
Strand: Direct
Name: crp [C]
Synonym: BVU_3580
Alternate gene names: 150006071
Gene position: 4443344-4444045 (Clockwise)
Preceding gene: 150006070
Following gene: 150006072
Centisome position: 86.06
GC content: 37.46
Gene sequence:
>702_bases ATGGTTAGAAAAGAATTATCAGAAACTGAGATTGCTGAAAGTATACCAGACTTATGGCAACCTTTAACACAGGAACAAAG AGAGTTCTTGGCTCAGAACTTTACGATACAGAAGTATAAAAAGAATGAGACGATATACTGCGAAGGAGAAACTCCGATGC ACCTTATGTGTCTTCTTAGTGGAAAAGTAAAAATCTACAAAGAAGGTGTGGGAGGACGTAGCCAGATTATCCGCGTATTA AAGACGAAAGAATATTTCGCATACCGAGCTTTTTTTGCCGAAGGGAACTTCGTGACAGCTGCTTCCGCTTTCGAGCCTTG CACTATCTGCCTTATTCCCATGCCGGCCATTATGAAACTGATAAAAGACAACTCTGAATTAGCTTTGTTCTTTATCCGCC AACTTTCTATAGATTTGGGAATTTCTGATGAAAGAACCGTAAATCTTACGCAAAAACATATTCGTGGACGATTGGCGGAA TCTCTGTTATTTTTGAAAGATACTTATGGAGTAGAAGAAGATGAATCTACACTAAGCATTTACCTTTCACGAGAAGATTT GGCAAACTTATCAAATATGACTACTTCGAACGCAATCCGTACGCTTTCTAACTTTGCAACTGAAAAACTGATTACCATCG ACGGTAGAAAAATTAAAATCATTGATGAAGAGAAACTAAAAAAAATCAGCAAAATAGGATAA
Upstream 100 bases:
>100_bases ATAAATTAATAATATATCTTTCTTTTTTCTTCTGATTACTTCGTCCTTTTATTTTTTCTTCTTATATTTGTGCTCTATAA CACGGTTTTATAGCACGTTT
Downstream 100 bases:
>100_bases AATCTAATATCAATTCATACTTCACACACACAGGCGTCCGTTTTTCCATAACAGACGCCTGTTTTTTCTCTACTTACAAA ACCTTTTTCAGTACCAGCTG
Product: transcriptional regulator
Products: NA
Alternate protein names: Crp/FNR Family Transcriptional Regulator; Transcriptional Regulator; CRP/FNR Family Transcriptional Regulator; Crp/Fnr Family Transcriptional Regulator; Transcriptional Regulatory Protein; Transcriptional Regulator CAP Family; Crp-Family Transcriptional Regulator; Crp Family Transcriptional Regulator; Fumarate And Nitrate Reduction Regulatory Protein; Response Regulator Receiver; Crp Family Regulatory Protein; DNR Protein; FNR Family Transcriptional Regulator Protein; Transcription Regulator; Global Nitrogen Regulator NtcA
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MVRKELSETEIAESIPDLWQPLTQEQREFLAQNFTIQKYKKNETIYCEGETPMHLMCLLSGKVKIYKEGVGGRSQIIRVL KTKEYFAYRAFFAEGNFVTAASAFEPCTICLIPMPAIMKLIKDNSELALFFIRQLSIDLGISDERTVNLTQKHIRGRLAE SLLFLKDTYGVEEDESTLSIYLSREDLANLSNMTTSNAIRTLSNFATEKLITIDGRKIKIIDEEKLKKISKIG
Sequences:
>Translated_233_residues MVRKELSETEIAESIPDLWQPLTQEQREFLAQNFTIQKYKKNETIYCEGETPMHLMCLLSGKVKIYKEGVGGRSQIIRVL KTKEYFAYRAFFAEGNFVTAASAFEPCTICLIPMPAIMKLIKDNSELALFFIRQLSIDLGISDERTVNLTQKHIRGRLAE SLLFLKDTYGVEEDESTLSIYLSREDLANLSNMTTSNAIRTLSNFATEKLITIDGRKIKIIDEEKLKKISKIG >Mature_233_residues MVRKELSETEIAESIPDLWQPLTQEQREFLAQNFTIQKYKKNETIYCEGETPMHLMCLLSGKVKIYKEGVGGRSQIIRVL KTKEYFAYRAFFAEGNFVTAASAFEPCTICLIPMPAIMKLIKDNSELALFFIRQLSIDLGISDERTVNLTQKHIRGRLAE SLLFLKDTYGVEEDESTLSIYLSREDLANLSNMTTSNAIRTLSNFATEKLITIDGRKIKIIDEEKLKKISKIG
Specific function: This Protein Complexes With Cyclic AMP And Binds To Specific DNA Sites Near The Promoter To Regulate The Transcription Of Several Catabolite-Sensitive Operons. The Protein Induces A Severe Bend In The DNA. Acts As A Negative Regulator Of Its Own Synthesi
COG id: COG0664
COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26604; Mature: 26604
Theoretical pI: Translated: 7.29; Mature: 7.29
Prosite motif: PS50042 CNMP_BINDING_3 ; PS51063 HTH_CRP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRKELSETEIAESIPDLWQPLTQEQREFLAQNFTIQKYKKNETIYCEGETPMHLMCLLS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEEECCCCCEEEEEEEC GKVKIYKEGVGGRSQIIRVLKTKEYFAYRAFFAEGNFVTAASAFEPCTICLIPMPAIMKL CCEEEEECCCCCHHHHHHHHHHHHHHHEEEEEECCCEEEECCCCCCEEEEEECHHHHHHH IKDNSELALFFIRQLSIDLGISDERTVNLTQKHIRGRLAESLLFLKDTYGVEEDESTLSI HCCCCHHHHHEEHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE YLSREDLANLSNMTTSNAIRTLSNFATEKLITIDGRKIKIIDEEKLKKISKIG EEEHHHHHHHHHCHHHHHHHHHHHHHHCEEEEECCCEEEEECHHHHHHHHCCC >Mature Secondary Structure MVRKELSETEIAESIPDLWQPLTQEQREFLAQNFTIQKYKKNETIYCEGETPMHLMCLLS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEEECCCCCEEEEEEEC GKVKIYKEGVGGRSQIIRVLKTKEYFAYRAFFAEGNFVTAASAFEPCTICLIPMPAIMKL CCEEEEECCCCCHHHHHHHHHHHHHHHEEEEEECCCEEEECCCCCCEEEEEECHHHHHHH IKDNSELALFFIRQLSIDLGISDERTVNLTQKHIRGRLAESLLFLKDTYGVEEDESTLSI HCCCCHHHHHEEHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE YLSREDLANLSNMTTSNAIRTLSNFATEKLITIDGRKIKIIDEEKLKKISKIG EEEHHHHHHHHHCHHHHHHHHHHHHHHCEEEEECCCEEEEECHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA