Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
---|---|
Accession | NC_009614 |
Length | 5,163,189 |
Click here to switch to the map view.
The map label for this gene is glnA [H]
Identifier: 150006070
GI number: 150006070
Start: 4440993
End: 4443182
Strand: Direct
Name: glnA [H]
Synonym: BVU_3579
Alternate gene names: 150006070
Gene position: 4440993-4443182 (Clockwise)
Preceding gene: 150006053
Following gene: 150006071
Centisome position: 86.01
GC content: 44.34
Gene sequence:
>2190_bases ATGTCCAAAATGAGATTTTTTGCTCTACAGGAGTTAGCCAACAGACGCCCCGTTAAAGTTGACTACCCCTCTGAAAAGTT AGCTGATTATTACGGCAACCACGTATTCGACCGTAAAAAAATGCAGGAATATCTGCCTAGTGAGGCTTATAAAGCAGTAA TAAACGCAATCGAGAAAGGTACCCCTATCAATCGTGAAATGGCCGACATGATAGCCAATGGCATGAAGAATTGGGCAAAG ACCTTTAATGTTACCCACTACACTCATTGGTTCCAGCCTCTGACTGACGGAACTGCCGAAAAGCACGACGGCTTTATTGA ATTCGGTGACGACGGTAATGTTATAGAACGCTTCTCGGGCAAACTGCTTATCCAACAAGAACCGGATGCATCCAGTTTTC CCAACGGCGGTATCCGGAACACATTTGAAGCACGTGGCTATACGGCATGGGATGTTTCTTCTCCGGCTTTCATTGTAGAC AGCACACTTTGTATTCCTACTATCTTCATCTCTTATACAGGCGAAGCACTCGACTATAAAACTCCTTTGTTGAAGGCATT AGGTGCTGTAGACAAAGCGGCAACTGAGGTTTGCAGAATGTTCGATCCAAACGTAAAACGCGTATTCGCCAATCTGGGTT GGGAACAAGAATACTTTTTAGTGGATACCGCACTATATAATGCACGTCCGGATCTTTGCCTGACCGGACGCACCTTGATG GGACACTCGTCTGCCAAGGACCAGCAGCTAGACGACCACTACTTCGGTTCCATCCCTCCACGTGTAACCAGTTTTATGAA AGAATTGGAACTGGAATGTCACAAACTAGGGATTCCGGTAAAAACACGGCATAACGAAGTGGCTCCCAACCAATTTGAGC TAGCTCCTATTTTTGAAGATGTAAATCTGGCCAACGACCATAACCAGCTGGTAATGGACCTGATGAAACGTATCGCTTCC AAACACAATTTTACTGTACTGCTCCACGAAAAACCATTCAAAGGAGTAAACGGATCGGGCAAACACAACAACTGGTCACT TTGTACAGACACAGGTATCAATTTGTTCTCTCCTGCCAAGACTGCGGAAGGAAATATGCTTTTCCTGACTTTCATAGTCA ACGTACTGATGATGGTCTATAAAAACCAAGATTTACTACGTGCCTCTATTGTCAGTGCCGGAAACAGCCATCGCCTAGGA GCAAATGAAGCCCCCCCCGCTATTCTGTCTATTTTCCTAGGACGTCATCTTTCCCATATGTTGGACGAAGTAGTGGCACG TCTGAATGACGCCGAACTGACCCCTGATGAAAAGAAAGCATTGCAATTGGGTATCGGGCGCATACCTGCCATATTGCAAG ACAATACAGACCGTAACCGTACCTCTCCTTTTGCCTTCACCGGAAACCGTTTTGAATTCCGTGCTGCAGGCTCATCTGCC AACTGTGCCGCATCAATGATTGTGATCAATGCCGCTATGGCACACCAGTTGAATGAGTTCAAGACCCAGATAGATAAATT AGTAAACGGAGGGATGGAACAGGAAGAAGCTCTGTATAAGGTATTAAAAGAAACCATCATCGCTTCACAAAACATCCGTT TTGAAGGTGACGGCTACTCGGAAGAATGGAAAGCAGAAGCCGCGCGACGCGGATTGACCAATATCTGCCATGTACCCGAA GCCATCCTGAAGTTCAACGATGAGCAATCTCGTGCAGTACTGATAGGCGAAAAAATATTCAATGAAAATGAATTGTTCTG TCGTATAGAAGTGGAACTGGAAAAGTTTACTAAAAAGGTCCAGATTGAAAGTCGTGTACTAGGCGATCTAGCTATCAATC ATATTGTTCCCACAGCTGTAATTTATCAGAACAGACTATTAGAAAATCTTCGTGGTCTGAAAGAGATATTCTCCACCGAA GAATACGAAGAGCTGACCGAAGACCGGAAGAATTTGGTACGTGAAATTCAAAACCGCATACTTGCTATTAAAAAAGCCGT GCACAACATGACAGAAGCCCGAAAAGTAGCAAATCATTTGGGAAGCCAAGTAGAGAAAGCCTTCAGTTACGAGGAACAAG TGCGTCCATATCTGGAAGAAATCCGCGACCATATTGACCATTTGGAACTAGAAATAGACGATGAGATTTGGCCATTACCT AAATATCGTGAATTACTGTTCACCAAATAA
Upstream 100 bases:
>100_bases TTAACATCCTTAACAGAAATGAAAAATGATTAGCGATATAGCGAATTATTAATCAAAAAGCAGTATTTTTGCAGCCAACA ACCAGTAAAAGAAAGACAAC
Downstream 100 bases:
>100_bases AATTTCACAAAAAAAAGAAAGGATAGGAGATAAGAACCTATCCTTTTGTTATTTTTTGAAGATAAATTAATAATATATCT TTCTTTTTTCTTCTGATTAC
Product: glutamine synthetase
Products: NA
Alternate protein names: GS; Glutamate--ammonia ligase [H]
Number of amino acids: Translated: 729; Mature: 728
Protein sequence:
>729_residues MSKMRFFALQELANRRPVKVDYPSEKLADYYGNHVFDRKKMQEYLPSEAYKAVINAIEKGTPINREMADMIANGMKNWAK TFNVTHYTHWFQPLTDGTAEKHDGFIEFGDDGNVIERFSGKLLIQQEPDASSFPNGGIRNTFEARGYTAWDVSSPAFIVD STLCIPTIFISYTGEALDYKTPLLKALGAVDKAATEVCRMFDPNVKRVFANLGWEQEYFLVDTALYNARPDLCLTGRTLM GHSSAKDQQLDDHYFGSIPPRVTSFMKELELECHKLGIPVKTRHNEVAPNQFELAPIFEDVNLANDHNQLVMDLMKRIAS KHNFTVLLHEKPFKGVNGSGKHNNWSLCTDTGINLFSPAKTAEGNMLFLTFIVNVLMMVYKNQDLLRASIVSAGNSHRLG ANEAPPAILSIFLGRHLSHMLDEVVARLNDAELTPDEKKALQLGIGRIPAILQDNTDRNRTSPFAFTGNRFEFRAAGSSA NCAASMIVINAAMAHQLNEFKTQIDKLVNGGMEQEEALYKVLKETIIASQNIRFEGDGYSEEWKAEAARRGLTNICHVPE AILKFNDEQSRAVLIGEKIFNENELFCRIEVELEKFTKKVQIESRVLGDLAINHIVPTAVIYQNRLLENLRGLKEIFSTE EYEELTEDRKNLVREIQNRILAIKKAVHNMTEARKVANHLGSQVEKAFSYEEQVRPYLEEIRDHIDHLELEIDDEIWPLP KYRELLFTK
Sequences:
>Translated_729_residues MSKMRFFALQELANRRPVKVDYPSEKLADYYGNHVFDRKKMQEYLPSEAYKAVINAIEKGTPINREMADMIANGMKNWAK TFNVTHYTHWFQPLTDGTAEKHDGFIEFGDDGNVIERFSGKLLIQQEPDASSFPNGGIRNTFEARGYTAWDVSSPAFIVD STLCIPTIFISYTGEALDYKTPLLKALGAVDKAATEVCRMFDPNVKRVFANLGWEQEYFLVDTALYNARPDLCLTGRTLM GHSSAKDQQLDDHYFGSIPPRVTSFMKELELECHKLGIPVKTRHNEVAPNQFELAPIFEDVNLANDHNQLVMDLMKRIAS KHNFTVLLHEKPFKGVNGSGKHNNWSLCTDTGINLFSPAKTAEGNMLFLTFIVNVLMMVYKNQDLLRASIVSAGNSHRLG ANEAPPAILSIFLGRHLSHMLDEVVARLNDAELTPDEKKALQLGIGRIPAILQDNTDRNRTSPFAFTGNRFEFRAAGSSA NCAASMIVINAAMAHQLNEFKTQIDKLVNGGMEQEEALYKVLKETIIASQNIRFEGDGYSEEWKAEAARRGLTNICHVPE AILKFNDEQSRAVLIGEKIFNENELFCRIEVELEKFTKKVQIESRVLGDLAINHIVPTAVIYQNRLLENLRGLKEIFSTE EYEELTEDRKNLVREIQNRILAIKKAVHNMTEARKVANHLGSQVEKAFSYEEQVRPYLEEIRDHIDHLELEIDDEIWPLP KYRELLFTK >Mature_728_residues SKMRFFALQELANRRPVKVDYPSEKLADYYGNHVFDRKKMQEYLPSEAYKAVINAIEKGTPINREMADMIANGMKNWAKT FNVTHYTHWFQPLTDGTAEKHDGFIEFGDDGNVIERFSGKLLIQQEPDASSFPNGGIRNTFEARGYTAWDVSSPAFIVDS TLCIPTIFISYTGEALDYKTPLLKALGAVDKAATEVCRMFDPNVKRVFANLGWEQEYFLVDTALYNARPDLCLTGRTLMG HSSAKDQQLDDHYFGSIPPRVTSFMKELELECHKLGIPVKTRHNEVAPNQFELAPIFEDVNLANDHNQLVMDLMKRIASK HNFTVLLHEKPFKGVNGSGKHNNWSLCTDTGINLFSPAKTAEGNMLFLTFIVNVLMMVYKNQDLLRASIVSAGNSHRLGA NEAPPAILSIFLGRHLSHMLDEVVARLNDAELTPDEKKALQLGIGRIPAILQDNTDRNRTSPFAFTGNRFEFRAAGSSAN CAASMIVINAAMAHQLNEFKTQIDKLVNGGMEQEEALYKVLKETIIASQNIRFEGDGYSEEWKAEAARRGLTNICHVPEA ILKFNDEQSRAVLIGEKIFNENELFCRIEVELEKFTKKVQIESRVLGDLAINHIVPTAVIYQNRLLENLRGLKEIFSTEE YEELTEDRKNLVREIQNRILAIKKAVHNMTEARKVANHLGSQVEKAFSYEEQVRPYLEEIRDHIDHLELEIDDEIWPLPK YRELLFTK
Specific function: Unknown
COG id: COG3968
COG function: function code R; Uncharacterized protein related to glutamine synthetase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamine synthetase family. Type 3 subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1040 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 15324 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal medi
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014746 - InterPro: IPR008146 - InterPro: IPR022147 [H]
Pfam domain/function: PF00120 Gln-synt_C; PF12437 GSIII_N [H]
EC number: =6.3.1.2 [H]
Molecular weight: Translated: 82843; Mature: 82712
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: PS00181 GLNA_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKMRFFALQELANRRPVKVDYPSEKLADYYGNHVFDRKKMQEYLPSEAYKAVINAIEKG CCCHHHHHHHHHHCCCCEEECCCHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHCC TPINREMADMIANGMKNWAKTFNVTHYTHWFQPLTDGTAEKHDGFIEFGDDGNVIERFSG CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHCCC KLLIQQEPDASSFPNGGIRNTFEARGYTAWDVSSPAFIVDSTLCIPTIFISYTGEALDYK CEEEEECCCCCCCCCCCCCCCHHCCCEEEECCCCCCEEEECHHHHHHHHHHHCCCHHHHH TPLLKALGAVDKAATEVCRMFDPNVKRVFANLGWEQEYFLVDTALYNARPDLCLTGRTLM HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEHHHHCCCCCEEEECCHHH GHSSAKDQQLDDHYFGSIPPRVTSFMKELELECHKLGIPVKTRHNEVAPNQFELAPIFED CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEHHHC VNLANDHNQLVMDLMKRIASKHNFTVLLHEKPFKGVNGSGKHNNWSLCTDTGINLFSPAK CCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCC TAEGNMLFLTFIVNVLMMVYKNQDLLRASIVSAGNSHRLGANEAPPAILSIFLGRHLSHM CCCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH LDEVVARLNDAELTPDEKKALQLGIGRIPAILQDNTDRNRTSPFAFTGNRFEFRAAGSSA HHHHHHHCCCCCCCCCHHHHHHHCCCCCCHHHCCCCCCCCCCCCEEECCCEEEEECCCCC NCAASMIVINAAMAHQLNEFKTQIDKLVNGGMEQEEALYKVLKETIIASQNIRFEGDGYS CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEECCCCCC EEWKAEAARRGLTNICHVPEAILKFNDEQSRAVLIGEKIFNENELFCRIEVELEKFTKKV HHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEEHHHCCCCCEEEEEEEEHHHHHHHH QIESRVLGDLAINHIVPTAVIYQNRLLENLRGLKEIFSTEEYEELTEDRKNLVREIQNRI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH LAIKKAVHNMTEARKVANHLGSQVEKAFSYEEQVRPYLEEIRDHIDHLELEIDDEIWPLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCC KYRELLFTK HHHHHHCCC >Mature Secondary Structure SKMRFFALQELANRRPVKVDYPSEKLADYYGNHVFDRKKMQEYLPSEAYKAVINAIEKG CCHHHHHHHHHHCCCCEEECCCHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHCC TPINREMADMIANGMKNWAKTFNVTHYTHWFQPLTDGTAEKHDGFIEFGDDGNVIERFSG CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHCCC KLLIQQEPDASSFPNGGIRNTFEARGYTAWDVSSPAFIVDSTLCIPTIFISYTGEALDYK CEEEEECCCCCCCCCCCCCCCHHCCCEEEECCCCCCEEEECHHHHHHHHHHHCCCHHHHH TPLLKALGAVDKAATEVCRMFDPNVKRVFANLGWEQEYFLVDTALYNARPDLCLTGRTLM HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEHHHHCCCCCEEEECCHHH GHSSAKDQQLDDHYFGSIPPRVTSFMKELELECHKLGIPVKTRHNEVAPNQFELAPIFED CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEHHHC VNLANDHNQLVMDLMKRIASKHNFTVLLHEKPFKGVNGSGKHNNWSLCTDTGINLFSPAK CCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCC TAEGNMLFLTFIVNVLMMVYKNQDLLRASIVSAGNSHRLGANEAPPAILSIFLGRHLSHM CCCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH LDEVVARLNDAELTPDEKKALQLGIGRIPAILQDNTDRNRTSPFAFTGNRFEFRAAGSSA HHHHHHHCCCCCCCCCHHHHHHHCCCCCCHHHCCCCCCCCCCCCEEECCCEEEEECCCCC NCAASMIVINAAMAHQLNEFKTQIDKLVNGGMEQEEALYKVLKETIIASQNIRFEGDGYS CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCEECCCCCC EEWKAEAARRGLTNICHVPEAILKFNDEQSRAVLIGEKIFNENELFCRIEVELEKFTKKV HHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEEHHHCCCCCEEEEEEEEHHHHHHHH QIESRVLGDLAINHIVPTAVIYQNRLLENLRGLKEIFSTEEYEELTEDRKNLVREIQNRI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH LAIKKAVHNMTEARKVANHLGSQVEKAFSYEEQVRPYLEEIRDHIDHLELEIDDEIWPLP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCC KYRELLFTK HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2576872 [H]