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The map label for this gene is ntrY [H]

Identifier: 150006030

GI number: 150006030

Start: 4384578

End: 4385906

Strand: Direct

Name: ntrY [H]

Synonym: BVU_3528

Alternate gene names: 150006030

Gene position: 4384578-4385906 (Clockwise)

Preceding gene: 150006029

Following gene: 150006032

Centisome position: 84.92

GC content: 37.92

Gene sequence:

>1329_bases
ATGATCATGGTATTCAGCAAACATCTATATATGGTTATCCTAAGCTACATCTTATTAATAATTGCTGTAGCCGGAGCTGG
TATCGCACTTATTATTACACATACCGCCCTTATTCTAGGCTGTCTTTTCTTGATTATTTCACTTTTTTTTATCAGAGCTT
TGGTAAAACAATTGAATAAATTCAATGCCAAAATAAGAATATTCTTGGATGCGATGGAAGATAAAGAGAGCATGATACTG
TTCAACGAGCAATCGGCAGATAAAGAAATGAATGCACTTAGCCATTCACTAAACCGAATCAATGAATTGCTTGCCACAAC
GAAATCGCAAAGCCGGGTACAAGAGAACTTTTATCACTCTTTACTGGAAGAAGTACCAAATGGAGTGCTAGCGTGGAACT
CCGAAAAAAGAGTTCTGTTTGTAAATGGTGCAGCCTTACGTTTGCTGGGAGTTGAGTCAATCATATTCCTCCGCCAATTG
GAAGAGCAATATCCGATCTTGAAAGATTTCATAACCCATGGAAATGTGGAAAATTCCTTTCTTTTACAATCTAACTCAAA
AAAACAACTGTCACTATCCATGAACCGGATGAAACTAAATTCAGAAACGATTACCCTGTTGGCTATCAAAGATATCAGTA
ATGAACTGAACGAGAAAGAAAGTGAGTCATGGAACAAACTTACCCGGGTGCTTACTCATGAAATTATGAATACCATTGCT
CCTATTGTTTCTCTGTCTCAAACACTTTCATTGCGCCCCGGTACGGACGAGAAAGTAATACGAGGACTTGGAGTGATTCG
TGAACAAAGCGAAAGACTGATGGAATTCACAGAATCATATCGACGCTTATCGTATATGCCGGAACCGAAAAAGAAGCGAT
TCTCACTGACCAATTCATTGCACAATCTAGGTCTGTTACTACAATCTGATTTTGAAAATGCTCATATCCATTTCATTCTG
CGTAGCACCCCCTCTGATATATATATTGAGGGCGATGAGAAGCAACTCTCTCAAGTTTTTTTAAATCTGCTGAAAAACAG
TATGCAATCATTGGAAGGAAAAACAGACGGACAAATAGAAGTAACACTGGAAGTAACAAACAAACTTTATATAAGACTAC
TTGACAATGGACGGGGAATCCCTATGGAATTGCAAGAAAAAATATTCGTTCCTTTCTTTACCACAAAAACAGAAGGAACT
GGTATCGGGCTTAGTCTGTGCCGGCAGATTATAAAAAGACATGGGGGCAATTTCTATTTACAGGAAAGCAGACAAGGAAA
AACTATGTTTGTTATAGAATGGCCCGTAGCTTCTTTTATTTTGAAATAA

Upstream 100 bases:

>100_bases
CAGCCATCCGTCAAAACGATGGAAATCTGACAGCAACAGCCGAACAGTTAGGCATCAGCCGCCAGACACTTTACAATAAA
ATAAAACGCTTTAAGCTCTG

Downstream 100 bases:

>100_bases
CAAAGTTCATTACAGGATCACTCTGATTAACACAGGTTATTCTTAAAAGTAAGGCGGAAATATAAAATAATAACCACTTA
TCTATAAACCAGCGTTAACC

Product: putative two-component system sensor histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 442; Mature: 442

Protein sequence:

>442_residues
MIMVFSKHLYMVILSYILLIIAVAGAGIALIITHTALILGCLFLIISLFFIRALVKQLNKFNAKIRIFLDAMEDKESMIL
FNEQSADKEMNALSHSLNRINELLATTKSQSRVQENFYHSLLEEVPNGVLAWNSEKRVLFVNGAALRLLGVESIIFLRQL
EEQYPILKDFITHGNVENSFLLQSNSKKQLSLSMNRMKLNSETITLLAIKDISNELNEKESESWNKLTRVLTHEIMNTIA
PIVSLSQTLSLRPGTDEKVIRGLGVIREQSERLMEFTESYRRLSYMPEPKKKRFSLTNSLHNLGLLLQSDFENAHIHFIL
RSTPSDIYIEGDEKQLSQVFLNLLKNSMQSLEGKTDGQIEVTLEVTNKLYIRLLDNGRGIPMELQEKIFVPFFTTKTEGT
GIGLSLCRQIIKRHGGNFYLQESRQGKTMFVIEWPVASFILK

Sequences:

>Translated_442_residues
MIMVFSKHLYMVILSYILLIIAVAGAGIALIITHTALILGCLFLIISLFFIRALVKQLNKFNAKIRIFLDAMEDKESMIL
FNEQSADKEMNALSHSLNRINELLATTKSQSRVQENFYHSLLEEVPNGVLAWNSEKRVLFVNGAALRLLGVESIIFLRQL
EEQYPILKDFITHGNVENSFLLQSNSKKQLSLSMNRMKLNSETITLLAIKDISNELNEKESESWNKLTRVLTHEIMNTIA
PIVSLSQTLSLRPGTDEKVIRGLGVIREQSERLMEFTESYRRLSYMPEPKKKRFSLTNSLHNLGLLLQSDFENAHIHFIL
RSTPSDIYIEGDEKQLSQVFLNLLKNSMQSLEGKTDGQIEVTLEVTNKLYIRLLDNGRGIPMELQEKIFVPFFTTKTEGT
GIGLSLCRQIIKRHGGNFYLQESRQGKTMFVIEWPVASFILK
>Mature_442_residues
MIMVFSKHLYMVILSYILLIIAVAGAGIALIITHTALILGCLFLIISLFFIRALVKQLNKFNAKIRIFLDAMEDKESMIL
FNEQSADKEMNALSHSLNRINELLATTKSQSRVQENFYHSLLEEVPNGVLAWNSEKRVLFVNGAALRLLGVESIIFLRQL
EEQYPILKDFITHGNVENSFLLQSNSKKQLSLSMNRMKLNSETITLLAIKDISNELNEKESESWNKLTRVLTHEIMNTIA
PIVSLSQTLSLRPGTDEKVIRGLGVIREQSERLMEFTESYRRLSYMPEPKKKRFSLTNSLHNLGLLLQSDFENAHIHFIL
RSTPSDIYIEGDEKQLSQVFLNLLKNSMQSLEGKTDGQIEVTLEVTNKLYIRLLDNGRGIPMELQEKIFVPFFTTKTEGT
GIGLSLCRQIIKRHGGNFYLQESRQGKTMFVIEWPVASFILK

Specific function: Member of the two-component regulatory system ntrY/ntrX involved in nitrogen level control. Probably activates ntrX by phosphorylation [H]

COG id: COG5000

COG function: function code T; Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1788549, Length=381, Percent_Identity=25.1968503937008, Blast_Score=86, Evalue=5e-18,
Organism=Escherichia coli, GI1790436, Length=230, Percent_Identity=30.4347826086957, Blast_Score=82, Evalue=7e-17,
Organism=Escherichia coli, GI1790300, Length=269, Percent_Identity=27.8810408921933, Blast_Score=81, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003660
- InterPro:   IPR000014
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082
- InterPro:   IPR017232 [H]

Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 50517; Mature: 50517

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: PS50112 PAS ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMVFSKHLYMVILSYILLIIAVAGAGIALIITHTALILGCLFLIISLFFIRALVKQLNK
CEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FNAKIRIFLDAMEDKESMILFNEQSADKEMNALSHSLNRINELLATTKSQSRVQENFYHS
CCCEEEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
LLEEVPNGVLAWNSEKRVLFVNGAALRLLGVESIIFLRQLEEQYPILKDFITHGNVENSF
HHHHCCCCEEEECCCCEEEEEECCEEEHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEE
LLQSNSKKQLSLSMNRMKLNSETITLLAIKDISNELNEKESESWNKLTRVLTHEIMNTIA
EEECCCCCHHEEEHHHEEECCCEEEEEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
PIVSLSQTLSLRPGTDEKVIRGLGVIREQSERLMEFTESYRRLSYMPEPKKKRFSLTNSL
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
HNLGLLLQSDFENAHIHFILRSTPSDIYIEGDEKQLSQVFLNLLKNSMQSLEGKTDGQIE
HHHHHHEECCCCCCEEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCEEE
VTLEVTNKLYIRLLDNGRGIPMELQEKIFVPFFTTKTEGTGIGLSLCRQIIKRHGGNFYL
EEEEECCEEEEEEECCCCCCCHHHHCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEE
QESRQGKTMFVIEWPVASFILK
EECCCCCEEEEEECCHHHHHCC
>Mature Secondary Structure
MIMVFSKHLYMVILSYILLIIAVAGAGIALIITHTALILGCLFLIISLFFIRALVKQLNK
CEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FNAKIRIFLDAMEDKESMILFNEQSADKEMNALSHSLNRINELLATTKSQSRVQENFYHS
CCCEEEEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
LLEEVPNGVLAWNSEKRVLFVNGAALRLLGVESIIFLRQLEEQYPILKDFITHGNVENSF
HHHHCCCCEEEECCCCEEEEEECCEEEHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEE
LLQSNSKKQLSLSMNRMKLNSETITLLAIKDISNELNEKESESWNKLTRVLTHEIMNTIA
EEECCCCCHHEEEHHHEEECCCEEEEEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
PIVSLSQTLSLRPGTDEKVIRGLGVIREQSERLMEFTESYRRLSYMPEPKKKRFSLTNSL
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
HNLGLLLQSDFENAHIHFILRSTPSDIYIEGDEKQLSQVFLNLLKNSMQSLEGKTDGQIE
HHHHHHEECCCCCCEEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCEEE
VTLEVTNKLYIRLLDNGRGIPMELQEKIFVPFFTTKTEGTGIGLSLCRQIIKRHGGNFYL
EEEEECCEEEEEEECCCCCCCHHHHCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEE
QESRQGKTMFVIEWPVASFILK
EECCCCCEEEEEECCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1661370 [H]