Click here to switch to the map view.

The map label for this gene is 150005863

Identifier: 150005863

GI number: 150005863

Start: 4201098

End: 4202597

Strand: Direct

Name: 150005863

Synonym: BVU_3359

Alternate gene names: NA

Gene position: 4201098-4202597 (Clockwise)

Preceding gene: 150005862

Following gene: 150005864

Centisome position: 81.37

GC content: 43.27

Gene sequence:

>1500_bases
ATGACAACTACATTAAAAGCAATCGTAAGGAAGCCGAGAACAGACGGCCTTTATGCAGTGTACATTCGCATCGTACACAA
CAGAAAACCGGGTTACATCAAGACCAACAAGATTGTTGATGCGGATCATATCTCTAAAGATAATGAACCGACCGACCCTG
TCGTTAATGAGTATTGCTCAATGCTCGTTCGACAATACACAGACCGACTGAACAGAGCCAACACTACCCTTTGGTCTGTC
AGTGAAATTATAGAGTATCTTCTTAAAACGGATGAAGAAGTTTGCTTCAGTGATTATTCGCGTATGTTTATCCGGCAAAT
GCGACTTGACGGACATGAGCGGAATGCCAAGAACTATCAGCTTGCAGTGGCACATCTGGAACGCTATATGGGAACTACAC
GAGTTATGTTTGGGCATTTGACTGCTGCCGTCCTCAAAAAATGGATAGAATCATTGTCTAAGACACATCGTGCGAAGGAA
ATGTACCCTACCAATGTCCGAATGATTTTCCGTTCGGCGATAGCAGATATGAATGATGATGAGAAGGGCATACAACGTAT
CAAGTTCGATCCGTGGGTGAAGGTACAAATTCCCAAGTCTGAGCCAAGTGAAAAACTGGCCATCAGTGCTGAAGAATGCC
GGGAGTTCTTCAATCGGCCTTTGCCTAGAACCAAGATGCTTTCTTCCCTCCCGGAACTGGGCAGAGATGTTGCACTTCTT
TCTCTGTGTTTAGGCGGAATCAATACCGTGGACTTGTACAATTTGAAGAAGTCGGATTATCATGACGGAATCATTGGCTA
CAAGCGTGCTAAGACCAAACACAGCCGCAAGGATGAAGCATATATAGAAATGCGCGTGGAACCGTTTATTCAAGACACGT
TCAACAAGTATCTGTCAGAAGAAGAGGATGAATTTCTTTTCACCTTCCACCAGCGCTATGGCAATACCGACAGCTTCAAT
GCCAATGTCAACATCGGCATCCGTAAAATTTGTATGGATATGGGTATGACAAATAAGGAAGATTTCTATTGCTTTTATAC
CTTCCGTCACACTTGGGCTACCATTGCGCAGAACGACTGCAATGCCAATCTTTATGAAGTGGCATTTGGTATGAACCATA
GTCATGGCTTCAAGGTAACCCGTGGATATGTAAAAGTAGATTTTACACCGGCATGGGCATTGAATGCCCGCATCATTGAC
TTCATCTTCTTTAGTAACAAGCCTAGTAAGCAGGGACTTGCCAAAGATTTGGATGAATCAGGAGATAAGATGTTTCGCAT
TTCTGCAAAGATGATGATTTACGCCCGTGCCTATTTCAAAGGTGAGGTTATCGCTGAATTTACAGACATCGGCTTCAACA
ATGTTGATGAAGTACTAAGCAGGATCGTGAAAATGTTCCCCAAAGACATACCAGTTGGATGTACTGTTCAGATTCGTCTA
ACGAATTGTGACAATCACAAAGAAGTGGTTTATGAACGCAGCAAAGGTAAGGGCTTCTAA

Upstream 100 bases:

>100_bases
ATGTGCGTACTCGCTTACTCACTGCTTACACTAAAATTGATGTTGCTTACACCTGCTTACACCATCAAAAAAGCCTATGG
CAGCGTAAAATTAAAGGCTT

Downstream 100 bases:

>100_bases
GCACTCTATACCTTATATATAGCGAACAATCCGTATCAATCGTTTGGACTGATGCGGATTGTCGTTTTCGGTAGGTTCCC
TACCATATCACTTGGTGTTC

Product: transposase

Products: NA

Alternate protein names: Integrase

Number of amino acids: Translated: 499; Mature: 498

Protein sequence:

>499_residues
MTTTLKAIVRKPRTDGLYAVYIRIVHNRKPGYIKTNKIVDADHISKDNEPTDPVVNEYCSMLVRQYTDRLNRANTTLWSV
SEIIEYLLKTDEEVCFSDYSRMFIRQMRLDGHERNAKNYQLAVAHLERYMGTTRVMFGHLTAAVLKKWIESLSKTHRAKE
MYPTNVRMIFRSAIADMNDDEKGIQRIKFDPWVKVQIPKSEPSEKLAISAEECREFFNRPLPRTKMLSSLPELGRDVALL
SLCLGGINTVDLYNLKKSDYHDGIIGYKRAKTKHSRKDEAYIEMRVEPFIQDTFNKYLSEEEDEFLFTFHQRYGNTDSFN
ANVNIGIRKICMDMGMTNKEDFYCFYTFRHTWATIAQNDCNANLYEVAFGMNHSHGFKVTRGYVKVDFTPAWALNARIID
FIFFSNKPSKQGLAKDLDESGDKMFRISAKMMIYARAYFKGEVIAEFTDIGFNNVDEVLSRIVKMFPKDIPVGCTVQIRL
TNCDNHKEVVYERSKGKGF

Sequences:

>Translated_499_residues
MTTTLKAIVRKPRTDGLYAVYIRIVHNRKPGYIKTNKIVDADHISKDNEPTDPVVNEYCSMLVRQYTDRLNRANTTLWSV
SEIIEYLLKTDEEVCFSDYSRMFIRQMRLDGHERNAKNYQLAVAHLERYMGTTRVMFGHLTAAVLKKWIESLSKTHRAKE
MYPTNVRMIFRSAIADMNDDEKGIQRIKFDPWVKVQIPKSEPSEKLAISAEECREFFNRPLPRTKMLSSLPELGRDVALL
SLCLGGINTVDLYNLKKSDYHDGIIGYKRAKTKHSRKDEAYIEMRVEPFIQDTFNKYLSEEEDEFLFTFHQRYGNTDSFN
ANVNIGIRKICMDMGMTNKEDFYCFYTFRHTWATIAQNDCNANLYEVAFGMNHSHGFKVTRGYVKVDFTPAWALNARIID
FIFFSNKPSKQGLAKDLDESGDKMFRISAKMMIYARAYFKGEVIAEFTDIGFNNVDEVLSRIVKMFPKDIPVGCTVQIRL
TNCDNHKEVVYERSKGKGF
>Mature_498_residues
TTTLKAIVRKPRTDGLYAVYIRIVHNRKPGYIKTNKIVDADHISKDNEPTDPVVNEYCSMLVRQYTDRLNRANTTLWSVS
EIIEYLLKTDEEVCFSDYSRMFIRQMRLDGHERNAKNYQLAVAHLERYMGTTRVMFGHLTAAVLKKWIESLSKTHRAKEM
YPTNVRMIFRSAIADMNDDEKGIQRIKFDPWVKVQIPKSEPSEKLAISAEECREFFNRPLPRTKMLSSLPELGRDVALLS
LCLGGINTVDLYNLKKSDYHDGIIGYKRAKTKHSRKDEAYIEMRVEPFIQDTFNKYLSEEEDEFLFTFHQRYGNTDSFNA
NVNIGIRKICMDMGMTNKEDFYCFYTFRHTWATIAQNDCNANLYEVAFGMNHSHGFKVTRGYVKVDFTPAWALNARIIDF
IFFSNKPSKQGLAKDLDESGDKMFRISAKMMIYARAYFKGEVIAEFTDIGFNNVDEVLSRIVKMFPKDIPVGCTVQIRLT
NCDNHKEVVYERSKGKGF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57992; Mature: 57861

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: PS00447 DNA_POLYMERASE_A

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTLKAIVRKPRTDGLYAVYIRIVHNRKPGYIKTNKIVDADHISKDNEPTDPVVNEYCS
CCCHHHHHHCCCCCCCEEEEEEEEEECCCCCEEECCCEECHHHCCCCCCCCCHHHHHHHH
MLVRQYTDRLNRANTTLWSVSEIIEYLLKTDEEVCFSDYSRMFIRQMRLDGHERNAKNYQ
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
LAVAHLERYMGTTRVMFGHLTAAVLKKWIESLSKTHRAKEMYPTNVRMIFRSAIADMNDD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC
EKGIQRIKFDPWVKVQIPKSEPSEKLAISAEECREFFNRPLPRTKMLSSLPELGRDVALL
HHHHHEEECCCEEEEEECCCCCCHHEEECHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
SLCLGGINTVDLYNLKKSDYHDGIIGYKRAKTKHSRKDEAYIEMRVEPFIQDTFNKYLSE
HHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHCC
EEDEFLFTFHQRYGNTDSFNANVNIGIRKICMDMGMTNKEDFYCFYTFRHTWATIAQNDC
CCCHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHCCCCCCCCEEEEEEEHHHHHHHHCCCC
NANLYEVAFGMNHSHGFKVTRGYVKVDFTPAWALNARIIDFIFFSNKPSKQGLAKDLDES
CCCCEEEEECCCCCCCCEEEECEEEEECCCCHHHCCEEEEEEEECCCCCCCHHHHHHHCC
GDKMFRISAKMMIYARAYFKGEVIAEFTDIGFNNVDEVLSRIVKMFPKDIPVGCTVQIRL
CCCEEEEEHHHEEEEHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEE
TNCDNHKEVVYERSKGKGF
ECCCCCHHHHEECCCCCCC
>Mature Secondary Structure 
TTTLKAIVRKPRTDGLYAVYIRIVHNRKPGYIKTNKIVDADHISKDNEPTDPVVNEYCS
CCHHHHHHCCCCCCCEEEEEEEEEECCCCCEEECCCEECHHHCCCCCCCCCHHHHHHHH
MLVRQYTDRLNRANTTLWSVSEIIEYLLKTDEEVCFSDYSRMFIRQMRLDGHERNAKNYQ
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHH
LAVAHLERYMGTTRVMFGHLTAAVLKKWIESLSKTHRAKEMYPTNVRMIFRSAIADMNDD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC
EKGIQRIKFDPWVKVQIPKSEPSEKLAISAEECREFFNRPLPRTKMLSSLPELGRDVALL
HHHHHEEECCCEEEEEECCCCCCHHEEECHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
SLCLGGINTVDLYNLKKSDYHDGIIGYKRAKTKHSRKDEAYIEMRVEPFIQDTFNKYLSE
HHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHCC
EEDEFLFTFHQRYGNTDSFNANVNIGIRKICMDMGMTNKEDFYCFYTFRHTWATIAQNDC
CCCHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHCCCCCCCCEEEEEEEHHHHHHHHCCCC
NANLYEVAFGMNHSHGFKVTRGYVKVDFTPAWALNARIIDFIFFSNKPSKQGLAKDLDES
CCCCEEEEECCCCCCCCEEEECEEEEECCCCHHHCCEEEEEEEECCCCCCCHHHHHHHCC
GDKMFRISAKMMIYARAYFKGEVIAEFTDIGFNNVDEVLSRIVKMFPKDIPVGCTVQIRL
CCCEEEEEHHHEEEEHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEE
TNCDNHKEVVYERSKGKGF
ECCCCCHHHHEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA