Definition Bacteroides vulgatus ATCC 8482 chromosome, complete genome.
Accession NC_009614
Length 5,163,189

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The map label for this gene is yuxL [H]

Identifier: 150005859

GI number: 150005859

Start: 4192220

End: 4194340

Strand: Direct

Name: yuxL [H]

Synonym: BVU_3355

Alternate gene names: 150005859

Gene position: 4192220-4194340 (Clockwise)

Preceding gene: 150005858

Following gene: 150005862

Centisome position: 81.19

GC content: 44.7

Gene sequence:

>2121_bases
ATGAATAAATCAAGCGCAACCATCATGGCAGCAGCACTTATGCTAGCTTCTTCCTGTACCGAAGTGAAACAGGAAGGACA
GGGCTACGAGCCCATTATAGGCAAGCAAGAAATCACCATCAAAGACGGTCGTCTTACCCCCGAAGCCCTGTGGGCAATGG
GACGCATAGGCAGTCTGAGTATTTCCCCCGATGGCAAACAGATAGCCTACACCGTAGCCTATTATAGTGTTCCCGAAAAC
AAAAGCCATCATGTAATTTACGTAATGGATGCCGATGGAAAGAACAACACCCTGCTTACTCAAACAGCATGGAATGAAAG
CGAGCCTCAATGGATAAAAGGCGGAACAAAAATCGCATTCTTATGCAATGAAAGTGGTGGCAGCCAAATTTGGGAGATGA
ATCCTGACGGTACGGAACGCCGTATCATTTCCGATTTCAAAGGAAACATAGAAGGATTCTCTTTTTCACCGGATGGCAAA
AAGATTCTTTTCATCTCACAAATAAAATACGGCCAACGCACCGTAGACCTCTACCCTGACCTGCCCAAAGCCAGCGGTAT
CATTGTAAACGACCTGATGTATAAACATTGGGATGAATGGGTAGAAAGTATTCCACATCCTTTTATCGCTGATTTTGATG
GTAACATGATGGGAGCAGCCACCGATATCATGGAAGGTGAGCCGTTTGAAGCTCCAATGAAACCTTTCGGAGGTATCGAG
CAGCTGGCTTGGAGCAACGACTCTAAACAAATAGCTTACACCAGCCGGAAAAAGCAAGGATTGGCATACGCAGTATCTAC
CGACTCGGATATATACCTTTATAATATAGAAAAAGGCACAACACTGAACCTGTGCAAACCGAATGGAAAAGATTCAAATG
GAACAGATGAAATGAAAGGATATGACACCAATCCTAAATTCAGCCCCAACGGCAAATACATTGCATGGCAAAGCATGGAG
CGCGATGGTTACGAAAGTGACCGGAACCGCCTGTGCATCTACAATTTAGATGACGGTCAAAAGACATTTGTTACCGAAAG
TTTTGAATCAGGCGTAGATGACTATTGCTGGAACAATGATTCGCAAAGTCTGTACTTTGTCGGTGTATGGCATGGAACCA
GCATGGTATACAGTGCCAATCTGAATGGTGATATAAAAAAACTGACTGATGGCATGTATGACTACGGATCAGTAGCCATG
GCGGGCGATAAAATAATTACCAAACGTCACTCTATCAGTGCCGCCGATGAAATCTACACCCTCACTCCTGCCGACGGGCA
AGTGGCGCAACTCTCACACGAGAATGATCACATCTTTAAACAGCTGAATTTGGGCAAAGTGGAGGAAAGATGGACCAAAA
CTACCGATGGCAAGCAAATGCTTTCATGGGTGATCTATCCCGTCAATTTTGACGCAAACAAGAAGTATCCTACTTTATTA
TTCTGTGAAGGTGGCCCGCAAAGTCCCGTCAGCCAATTCTGGAGCTACCGCTGGAACTTCCAGATTATGGCAGCCAACGA
TTATATTATCATTGCTCCGAATCGTCGTGGGCTACCTGGATTCGGCATGGAATGGTTGGAACAAATTAGCGGTGACTATG
GAGGTCAATGTATGAAAGACTATTTGTCAGCCATAGATGATATTTCAAAAGAACCATATGTAGATACTAATCGTTTGGGA
TGCGTAGGTGCCAGCTTCGGCGGATTCTCCGTCTATTGGCTGGCGGGACACCATGACAAACGTTTTAAAGCATTTATCGC
ACACGATGGTATATTCAATATGGAGCAGCAATATCTGGAAACAGAAGAAATGTGGTTCGCCAACTGGGATATGGGTGGTG
CATATTGGGACAAAAACAATGCAACGGCACAACGTACCTTTGCCAACTCTCCCCATCGTTTCGTTGATAAATGGGACACT
CCCATTCTCTGCATTCACGGTGAAAAGGATTACAGAATTCTTGCTTCACAAGGTATGTCGGCGTTCAATGCAGCTGTATT
GCGCGGTGTTCCGGCCGAACTTTTATTATATCCGGATGAGAATCATTGGGTATTGAAACCGCAAAATGGGGTGTTATGGC
AACGCACTTTCTTTAGTTGGTTAGATAAATGGCTCAAATAA

Upstream 100 bases:

>100_bases
GACACACAAAGAAACAAAACAAATATGCAGGAACATTTCACATCACCGGCTTTTATACGTATTTTTGCAATCAGTTAATC
ATCAAAAACAATTTTTAGAT

Downstream 100 bases:

>100_bases
CGCCTAAATTACTGCAATATTATCCGTTATTAGAACTATATAGTATAATTTTCAATTTTTGTGTTACCTTTGTAATGTCA
AACAAAAAATGAACATTAAG

Product: prolyl oligopeptidase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 706; Mature: 706

Protein sequence:

>706_residues
MNKSSATIMAAALMLASSCTEVKQEGQGYEPIIGKQEITIKDGRLTPEALWAMGRIGSLSISPDGKQIAYTVAYYSVPEN
KSHHVIYVMDADGKNNTLLTQTAWNESEPQWIKGGTKIAFLCNESGGSQIWEMNPDGTERRIISDFKGNIEGFSFSPDGK
KILFISQIKYGQRTVDLYPDLPKASGIIVNDLMYKHWDEWVESIPHPFIADFDGNMMGAATDIMEGEPFEAPMKPFGGIE
QLAWSNDSKQIAYTSRKKQGLAYAVSTDSDIYLYNIEKGTTLNLCKPNGKDSNGTDEMKGYDTNPKFSPNGKYIAWQSME
RDGYESDRNRLCIYNLDDGQKTFVTESFESGVDDYCWNNDSQSLYFVGVWHGTSMVYSANLNGDIKKLTDGMYDYGSVAM
AGDKIITKRHSISAADEIYTLTPADGQVAQLSHENDHIFKQLNLGKVEERWTKTTDGKQMLSWVIYPVNFDANKKYPTLL
FCEGGPQSPVSQFWSYRWNFQIMAANDYIIIAPNRRGLPGFGMEWLEQISGDYGGQCMKDYLSAIDDISKEPYVDTNRLG
CVGASFGGFSVYWLAGHHDKRFKAFIAHDGIFNMEQQYLETEEMWFANWDMGGAYWDKNNATAQRTFANSPHRFVDKWDT
PILCIHGEKDYRILASQGMSAFNAAVLRGVPAELLLYPDENHWVLKPQNGVLWQRTFFSWLDKWLK

Sequences:

>Translated_706_residues
MNKSSATIMAAALMLASSCTEVKQEGQGYEPIIGKQEITIKDGRLTPEALWAMGRIGSLSISPDGKQIAYTVAYYSVPEN
KSHHVIYVMDADGKNNTLLTQTAWNESEPQWIKGGTKIAFLCNESGGSQIWEMNPDGTERRIISDFKGNIEGFSFSPDGK
KILFISQIKYGQRTVDLYPDLPKASGIIVNDLMYKHWDEWVESIPHPFIADFDGNMMGAATDIMEGEPFEAPMKPFGGIE
QLAWSNDSKQIAYTSRKKQGLAYAVSTDSDIYLYNIEKGTTLNLCKPNGKDSNGTDEMKGYDTNPKFSPNGKYIAWQSME
RDGYESDRNRLCIYNLDDGQKTFVTESFESGVDDYCWNNDSQSLYFVGVWHGTSMVYSANLNGDIKKLTDGMYDYGSVAM
AGDKIITKRHSISAADEIYTLTPADGQVAQLSHENDHIFKQLNLGKVEERWTKTTDGKQMLSWVIYPVNFDANKKYPTLL
FCEGGPQSPVSQFWSYRWNFQIMAANDYIIIAPNRRGLPGFGMEWLEQISGDYGGQCMKDYLSAIDDISKEPYVDTNRLG
CVGASFGGFSVYWLAGHHDKRFKAFIAHDGIFNMEQQYLETEEMWFANWDMGGAYWDKNNATAQRTFANSPHRFVDKWDT
PILCIHGEKDYRILASQGMSAFNAAVLRGVPAELLLYPDENHWVLKPQNGVLWQRTFFSWLDKWLK
>Mature_706_residues
MNKSSATIMAAALMLASSCTEVKQEGQGYEPIIGKQEITIKDGRLTPEALWAMGRIGSLSISPDGKQIAYTVAYYSVPEN
KSHHVIYVMDADGKNNTLLTQTAWNESEPQWIKGGTKIAFLCNESGGSQIWEMNPDGTERRIISDFKGNIEGFSFSPDGK
KILFISQIKYGQRTVDLYPDLPKASGIIVNDLMYKHWDEWVESIPHPFIADFDGNMMGAATDIMEGEPFEAPMKPFGGIE
QLAWSNDSKQIAYTSRKKQGLAYAVSTDSDIYLYNIEKGTTLNLCKPNGKDSNGTDEMKGYDTNPKFSPNGKYIAWQSME
RDGYESDRNRLCIYNLDDGQKTFVTESFESGVDDYCWNNDSQSLYFVGVWHGTSMVYSANLNGDIKKLTDGMYDYGSVAM
AGDKIITKRHSISAADEIYTLTPADGQVAQLSHENDHIFKQLNLGKVEERWTKTTDGKQMLSWVIYPVNFDANKKYPTLL
FCEGGPQSPVSQFWSYRWNFQIMAANDYIIIAPNRRGLPGFGMEWLEQISGDYGGQCMKDYLSAIDDISKEPYVDTNRLG
CVGASFGGFSVYWLAGHHDKRFKAFIAHDGIFNMEQQYLETEEMWFANWDMGGAYWDKNNATAQRTFANSPHRFVDKWDT
PILCIHGEKDYRILASQGMSAFNAAVLRGVPAELLLYPDENHWVLKPQNGVLWQRTFFSWLDKWLK

Specific function: Unknown

COG id: COG1506

COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S9B family [H]

Homologues:

Organism=Homo sapiens, GI23510451, Length=551, Percent_Identity=21.2341197822142, Blast_Score=96, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI25149159, Length=342, Percent_Identity=26.0233918128655, Blast_Score=92, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24582257, Length=313, Percent_Identity=23.0031948881789, Blast_Score=67, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR011659
- InterPro:   IPR001375 [H]

Pfam domain/function: PF07676 PD40; PF00326 Peptidase_S9 [H]

EC number: NA

Molecular weight: Translated: 79820; Mature: 79820

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKSSATIMAAALMLASSCTEVKQEGQGYEPIIGKQEITIKDGRLTPEALWAMGRIGSLS
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHCCCCEEE
ISPDGKQIAYTVAYYSVPENKSHHVIYVMDADGKNNTLLTQTAWNESEPQWIKGGTKIAF
ECCCCCEEEEEEEEEECCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCEECCCCEEEE
LCNESGGSQIWEMNPDGTERRIISDFKGNIEGFSFSPDGKKILFISQIKYGQRTVDLYPD
EEECCCCCEEEEECCCCCHHHHHHHHCCCCCCEEECCCCCEEEEEEEECCCCEEEEECCC
LPKASGIIVNDLMYKHWDEWVESIPHPFIADFDGNMMGAATDIMEGEPFEAPMKPFGGIE
CCCCCCEEEHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHCCCCCCCCCCCCCCCCHH
QLAWSNDSKQIAYTSRKKQGLAYAVSTDSDIYLYNIEKGTTLNLCKPNGKDSNGTDEMKG
HHHCCCCCCEEEEECCCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCC
YDTNPKFSPNGKYIAWQSMERDGYESDRNRLCIYNLDDGQKTFVTESFESGVDDYCWNND
CCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEECHHHCCCCHHCCCCC
SQSLYFVGVWHGTSMVYSANLNGDIKKLTDGMYDYGSVAMAGDKIITKRHSISAADEIYT
CCEEEEEEEEECCEEEEEECCCCCHHHHHCCCCCCCCEEECCCEEEEECCCCCCCCCEEE
LTPADGQVAQLSHENDHIFKQLNLGKVEERWTKTTDGKQMLSWVIYPVNFDANKKYPTLL
ECCCCCCEEEECCCCCHHHHHCCCCCHHHHHCCCCCHHEEEEEEEEEEECCCCCCCCEEE
FCEGGPQSPVSQFWSYRWNFQIMAANDYIIIAPNRRGLPGFGMEWLEQISGDYGGQCMKD
EECCCCCCHHHHHHCEEEEEEEEEECCEEEECCCCCCCCCCCHHHHHHHCCCCCCHHHHH
YLSAIDDISKEPYVDTNRLGCVGASFGGFSVYWLAGHHDKRFKAFIAHDGIFNMEQQYLE
HHHHHHHCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCEEEEEEECCCCCCHHHHHC
TEEMWFANWDMGGAYWDKNNATAQRTFANSPHRFVDKWDTPILCIHGEKDYRILASQGMS
HHHEEEEECCCCCEEECCCCCEEHHHHCCCCHHHHHCCCCCEEEEECCCCCEEEECCCCH
AFNAAVLRGVPAELLLYPDENHWVLKPQNGVLWQRTFFSWLDKWLK
HHHHHHHCCCCEEEEEEECCCCEEEECCCCEEEHHHHHHHHHHHCC
>Mature Secondary Structure
MNKSSATIMAAALMLASSCTEVKQEGQGYEPIIGKQEITIKDGRLTPEALWAMGRIGSLS
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHCCCCEEE
ISPDGKQIAYTVAYYSVPENKSHHVIYVMDADGKNNTLLTQTAWNESEPQWIKGGTKIAF
ECCCCCEEEEEEEEEECCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCEECCCCEEEE
LCNESGGSQIWEMNPDGTERRIISDFKGNIEGFSFSPDGKKILFISQIKYGQRTVDLYPD
EEECCCCCEEEEECCCCCHHHHHHHHCCCCCCEEECCCCCEEEEEEEECCCCEEEEECCC
LPKASGIIVNDLMYKHWDEWVESIPHPFIADFDGNMMGAATDIMEGEPFEAPMKPFGGIE
CCCCCCEEEHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHCCCCCCCCCCCCCCCCHH
QLAWSNDSKQIAYTSRKKQGLAYAVSTDSDIYLYNIEKGTTLNLCKPNGKDSNGTDEMKG
HHHCCCCCCEEEEECCCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCC
YDTNPKFSPNGKYIAWQSMERDGYESDRNRLCIYNLDDGQKTFVTESFESGVDDYCWNND
CCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEECHHHCCCCHHCCCCC
SQSLYFVGVWHGTSMVYSANLNGDIKKLTDGMYDYGSVAMAGDKIITKRHSISAADEIYT
CCEEEEEEEEECCEEEEEECCCCCHHHHHCCCCCCCCEEECCCEEEEECCCCCCCCCEEE
LTPADGQVAQLSHENDHIFKQLNLGKVEERWTKTTDGKQMLSWVIYPVNFDANKKYPTLL
ECCCCCCEEEECCCCCHHHHHCCCCCHHHHHCCCCCHHEEEEEEEEEEECCCCCCCCEEE
FCEGGPQSPVSQFWSYRWNFQIMAANDYIIIAPNRRGLPGFGMEWLEQISGDYGGQCMKD
EECCCCCCHHHHHHCEEEEEEEEEECCEEEECCCCCCCCCCCHHHHHHHCCCCCCHHHHH
YLSAIDDISKEPYVDTNRLGCVGASFGGFSVYWLAGHHDKRFKAFIAHDGIFNMEQQYLE
HHHHHHHCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCEEEEEEECCCCCCHHHHHC
TEEMWFANWDMGGAYWDKNNATAQRTFANSPHRFVDKWDTPILCIHGEKDYRILASQGMS
HHHEEEEECCCCCEEECCCCCEEHHHHCCCCHHHHHCCCCCEEEEECCCCCEEEECCCCH
AFNAAVLRGVPAELLLYPDENHWVLKPQNGVLWQRTFFSWLDKWLK
HHHHHHHCCCCEEEEEEECCCCEEEECCCCEEEHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 3098560 [H]