| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is yuxL [H]
Identifier: 150005859
GI number: 150005859
Start: 4192220
End: 4194340
Strand: Direct
Name: yuxL [H]
Synonym: BVU_3355
Alternate gene names: 150005859
Gene position: 4192220-4194340 (Clockwise)
Preceding gene: 150005858
Following gene: 150005862
Centisome position: 81.19
GC content: 44.7
Gene sequence:
>2121_bases ATGAATAAATCAAGCGCAACCATCATGGCAGCAGCACTTATGCTAGCTTCTTCCTGTACCGAAGTGAAACAGGAAGGACA GGGCTACGAGCCCATTATAGGCAAGCAAGAAATCACCATCAAAGACGGTCGTCTTACCCCCGAAGCCCTGTGGGCAATGG GACGCATAGGCAGTCTGAGTATTTCCCCCGATGGCAAACAGATAGCCTACACCGTAGCCTATTATAGTGTTCCCGAAAAC AAAAGCCATCATGTAATTTACGTAATGGATGCCGATGGAAAGAACAACACCCTGCTTACTCAAACAGCATGGAATGAAAG CGAGCCTCAATGGATAAAAGGCGGAACAAAAATCGCATTCTTATGCAATGAAAGTGGTGGCAGCCAAATTTGGGAGATGA ATCCTGACGGTACGGAACGCCGTATCATTTCCGATTTCAAAGGAAACATAGAAGGATTCTCTTTTTCACCGGATGGCAAA AAGATTCTTTTCATCTCACAAATAAAATACGGCCAACGCACCGTAGACCTCTACCCTGACCTGCCCAAAGCCAGCGGTAT CATTGTAAACGACCTGATGTATAAACATTGGGATGAATGGGTAGAAAGTATTCCACATCCTTTTATCGCTGATTTTGATG GTAACATGATGGGAGCAGCCACCGATATCATGGAAGGTGAGCCGTTTGAAGCTCCAATGAAACCTTTCGGAGGTATCGAG CAGCTGGCTTGGAGCAACGACTCTAAACAAATAGCTTACACCAGCCGGAAAAAGCAAGGATTGGCATACGCAGTATCTAC CGACTCGGATATATACCTTTATAATATAGAAAAAGGCACAACACTGAACCTGTGCAAACCGAATGGAAAAGATTCAAATG GAACAGATGAAATGAAAGGATATGACACCAATCCTAAATTCAGCCCCAACGGCAAATACATTGCATGGCAAAGCATGGAG CGCGATGGTTACGAAAGTGACCGGAACCGCCTGTGCATCTACAATTTAGATGACGGTCAAAAGACATTTGTTACCGAAAG TTTTGAATCAGGCGTAGATGACTATTGCTGGAACAATGATTCGCAAAGTCTGTACTTTGTCGGTGTATGGCATGGAACCA GCATGGTATACAGTGCCAATCTGAATGGTGATATAAAAAAACTGACTGATGGCATGTATGACTACGGATCAGTAGCCATG GCGGGCGATAAAATAATTACCAAACGTCACTCTATCAGTGCCGCCGATGAAATCTACACCCTCACTCCTGCCGACGGGCA AGTGGCGCAACTCTCACACGAGAATGATCACATCTTTAAACAGCTGAATTTGGGCAAAGTGGAGGAAAGATGGACCAAAA CTACCGATGGCAAGCAAATGCTTTCATGGGTGATCTATCCCGTCAATTTTGACGCAAACAAGAAGTATCCTACTTTATTA TTCTGTGAAGGTGGCCCGCAAAGTCCCGTCAGCCAATTCTGGAGCTACCGCTGGAACTTCCAGATTATGGCAGCCAACGA TTATATTATCATTGCTCCGAATCGTCGTGGGCTACCTGGATTCGGCATGGAATGGTTGGAACAAATTAGCGGTGACTATG GAGGTCAATGTATGAAAGACTATTTGTCAGCCATAGATGATATTTCAAAAGAACCATATGTAGATACTAATCGTTTGGGA TGCGTAGGTGCCAGCTTCGGCGGATTCTCCGTCTATTGGCTGGCGGGACACCATGACAAACGTTTTAAAGCATTTATCGC ACACGATGGTATATTCAATATGGAGCAGCAATATCTGGAAACAGAAGAAATGTGGTTCGCCAACTGGGATATGGGTGGTG CATATTGGGACAAAAACAATGCAACGGCACAACGTACCTTTGCCAACTCTCCCCATCGTTTCGTTGATAAATGGGACACT CCCATTCTCTGCATTCACGGTGAAAAGGATTACAGAATTCTTGCTTCACAAGGTATGTCGGCGTTCAATGCAGCTGTATT GCGCGGTGTTCCGGCCGAACTTTTATTATATCCGGATGAGAATCATTGGGTATTGAAACCGCAAAATGGGGTGTTATGGC AACGCACTTTCTTTAGTTGGTTAGATAAATGGCTCAAATAA
Upstream 100 bases:
>100_bases GACACACAAAGAAACAAAACAAATATGCAGGAACATTTCACATCACCGGCTTTTATACGTATTTTTGCAATCAGTTAATC ATCAAAAACAATTTTTAGAT
Downstream 100 bases:
>100_bases CGCCTAAATTACTGCAATATTATCCGTTATTAGAACTATATAGTATAATTTTCAATTTTTGTGTTACCTTTGTAATGTCA AACAAAAAATGAACATTAAG
Product: prolyl oligopeptidase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 706; Mature: 706
Protein sequence:
>706_residues MNKSSATIMAAALMLASSCTEVKQEGQGYEPIIGKQEITIKDGRLTPEALWAMGRIGSLSISPDGKQIAYTVAYYSVPEN KSHHVIYVMDADGKNNTLLTQTAWNESEPQWIKGGTKIAFLCNESGGSQIWEMNPDGTERRIISDFKGNIEGFSFSPDGK KILFISQIKYGQRTVDLYPDLPKASGIIVNDLMYKHWDEWVESIPHPFIADFDGNMMGAATDIMEGEPFEAPMKPFGGIE QLAWSNDSKQIAYTSRKKQGLAYAVSTDSDIYLYNIEKGTTLNLCKPNGKDSNGTDEMKGYDTNPKFSPNGKYIAWQSME RDGYESDRNRLCIYNLDDGQKTFVTESFESGVDDYCWNNDSQSLYFVGVWHGTSMVYSANLNGDIKKLTDGMYDYGSVAM AGDKIITKRHSISAADEIYTLTPADGQVAQLSHENDHIFKQLNLGKVEERWTKTTDGKQMLSWVIYPVNFDANKKYPTLL FCEGGPQSPVSQFWSYRWNFQIMAANDYIIIAPNRRGLPGFGMEWLEQISGDYGGQCMKDYLSAIDDISKEPYVDTNRLG CVGASFGGFSVYWLAGHHDKRFKAFIAHDGIFNMEQQYLETEEMWFANWDMGGAYWDKNNATAQRTFANSPHRFVDKWDT PILCIHGEKDYRILASQGMSAFNAAVLRGVPAELLLYPDENHWVLKPQNGVLWQRTFFSWLDKWLK
Sequences:
>Translated_706_residues MNKSSATIMAAALMLASSCTEVKQEGQGYEPIIGKQEITIKDGRLTPEALWAMGRIGSLSISPDGKQIAYTVAYYSVPEN KSHHVIYVMDADGKNNTLLTQTAWNESEPQWIKGGTKIAFLCNESGGSQIWEMNPDGTERRIISDFKGNIEGFSFSPDGK KILFISQIKYGQRTVDLYPDLPKASGIIVNDLMYKHWDEWVESIPHPFIADFDGNMMGAATDIMEGEPFEAPMKPFGGIE QLAWSNDSKQIAYTSRKKQGLAYAVSTDSDIYLYNIEKGTTLNLCKPNGKDSNGTDEMKGYDTNPKFSPNGKYIAWQSME RDGYESDRNRLCIYNLDDGQKTFVTESFESGVDDYCWNNDSQSLYFVGVWHGTSMVYSANLNGDIKKLTDGMYDYGSVAM AGDKIITKRHSISAADEIYTLTPADGQVAQLSHENDHIFKQLNLGKVEERWTKTTDGKQMLSWVIYPVNFDANKKYPTLL FCEGGPQSPVSQFWSYRWNFQIMAANDYIIIAPNRRGLPGFGMEWLEQISGDYGGQCMKDYLSAIDDISKEPYVDTNRLG CVGASFGGFSVYWLAGHHDKRFKAFIAHDGIFNMEQQYLETEEMWFANWDMGGAYWDKNNATAQRTFANSPHRFVDKWDT PILCIHGEKDYRILASQGMSAFNAAVLRGVPAELLLYPDENHWVLKPQNGVLWQRTFFSWLDKWLK >Mature_706_residues MNKSSATIMAAALMLASSCTEVKQEGQGYEPIIGKQEITIKDGRLTPEALWAMGRIGSLSISPDGKQIAYTVAYYSVPEN KSHHVIYVMDADGKNNTLLTQTAWNESEPQWIKGGTKIAFLCNESGGSQIWEMNPDGTERRIISDFKGNIEGFSFSPDGK KILFISQIKYGQRTVDLYPDLPKASGIIVNDLMYKHWDEWVESIPHPFIADFDGNMMGAATDIMEGEPFEAPMKPFGGIE QLAWSNDSKQIAYTSRKKQGLAYAVSTDSDIYLYNIEKGTTLNLCKPNGKDSNGTDEMKGYDTNPKFSPNGKYIAWQSME RDGYESDRNRLCIYNLDDGQKTFVTESFESGVDDYCWNNDSQSLYFVGVWHGTSMVYSANLNGDIKKLTDGMYDYGSVAM AGDKIITKRHSISAADEIYTLTPADGQVAQLSHENDHIFKQLNLGKVEERWTKTTDGKQMLSWVIYPVNFDANKKYPTLL FCEGGPQSPVSQFWSYRWNFQIMAANDYIIIAPNRRGLPGFGMEWLEQISGDYGGQCMKDYLSAIDDISKEPYVDTNRLG CVGASFGGFSVYWLAGHHDKRFKAFIAHDGIFNMEQQYLETEEMWFANWDMGGAYWDKNNATAQRTFANSPHRFVDKWDT PILCIHGEKDYRILASQGMSAFNAAVLRGVPAELLLYPDENHWVLKPQNGVLWQRTFFSWLDKWLK
Specific function: Unknown
COG id: COG1506
COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S9B family [H]
Homologues:
Organism=Homo sapiens, GI23510451, Length=551, Percent_Identity=21.2341197822142, Blast_Score=96, Evalue=1e-19, Organism=Caenorhabditis elegans, GI25149159, Length=342, Percent_Identity=26.0233918128655, Blast_Score=92, Evalue=1e-18, Organism=Drosophila melanogaster, GI24582257, Length=313, Percent_Identity=23.0031948881789, Blast_Score=67, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011042 - InterPro: IPR011659 - InterPro: IPR001375 [H]
Pfam domain/function: PF07676 PD40; PF00326 Peptidase_S9 [H]
EC number: NA
Molecular weight: Translated: 79820; Mature: 79820
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKSSATIMAAALMLASSCTEVKQEGQGYEPIIGKQEITIKDGRLTPEALWAMGRIGSLS CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHCCCCEEE ISPDGKQIAYTVAYYSVPENKSHHVIYVMDADGKNNTLLTQTAWNESEPQWIKGGTKIAF ECCCCCEEEEEEEEEECCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCEECCCCEEEE LCNESGGSQIWEMNPDGTERRIISDFKGNIEGFSFSPDGKKILFISQIKYGQRTVDLYPD EEECCCCCEEEEECCCCCHHHHHHHHCCCCCCEEECCCCCEEEEEEEECCCCEEEEECCC LPKASGIIVNDLMYKHWDEWVESIPHPFIADFDGNMMGAATDIMEGEPFEAPMKPFGGIE CCCCCCEEEHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHCCCCCCCCCCCCCCCCHH QLAWSNDSKQIAYTSRKKQGLAYAVSTDSDIYLYNIEKGTTLNLCKPNGKDSNGTDEMKG HHHCCCCCCEEEEECCCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCC YDTNPKFSPNGKYIAWQSMERDGYESDRNRLCIYNLDDGQKTFVTESFESGVDDYCWNND CCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEECHHHCCCCHHCCCCC SQSLYFVGVWHGTSMVYSANLNGDIKKLTDGMYDYGSVAMAGDKIITKRHSISAADEIYT CCEEEEEEEEECCEEEEEECCCCCHHHHHCCCCCCCCEEECCCEEEEECCCCCCCCCEEE LTPADGQVAQLSHENDHIFKQLNLGKVEERWTKTTDGKQMLSWVIYPVNFDANKKYPTLL ECCCCCCEEEECCCCCHHHHHCCCCCHHHHHCCCCCHHEEEEEEEEEEECCCCCCCCEEE FCEGGPQSPVSQFWSYRWNFQIMAANDYIIIAPNRRGLPGFGMEWLEQISGDYGGQCMKD EECCCCCCHHHHHHCEEEEEEEEEECCEEEECCCCCCCCCCCHHHHHHHCCCCCCHHHHH YLSAIDDISKEPYVDTNRLGCVGASFGGFSVYWLAGHHDKRFKAFIAHDGIFNMEQQYLE HHHHHHHCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCEEEEEEECCCCCCHHHHHC TEEMWFANWDMGGAYWDKNNATAQRTFANSPHRFVDKWDTPILCIHGEKDYRILASQGMS HHHEEEEECCCCCEEECCCCCEEHHHHCCCCHHHHHCCCCCEEEEECCCCCEEEECCCCH AFNAAVLRGVPAELLLYPDENHWVLKPQNGVLWQRTFFSWLDKWLK HHHHHHHCCCCEEEEEEECCCCEEEECCCCEEEHHHHHHHHHHHCC >Mature Secondary Structure MNKSSATIMAAALMLASSCTEVKQEGQGYEPIIGKQEITIKDGRLTPEALWAMGRIGSLS CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHCCCCEEE ISPDGKQIAYTVAYYSVPENKSHHVIYVMDADGKNNTLLTQTAWNESEPQWIKGGTKIAF ECCCCCEEEEEEEEEECCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCEECCCCEEEE LCNESGGSQIWEMNPDGTERRIISDFKGNIEGFSFSPDGKKILFISQIKYGQRTVDLYPD EEECCCCCEEEEECCCCCHHHHHHHHCCCCCCEEECCCCCEEEEEEEECCCCEEEEECCC LPKASGIIVNDLMYKHWDEWVESIPHPFIADFDGNMMGAATDIMEGEPFEAPMKPFGGIE CCCCCCEEEHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHCCCCCCCCCCCCCCCCHH QLAWSNDSKQIAYTSRKKQGLAYAVSTDSDIYLYNIEKGTTLNLCKPNGKDSNGTDEMKG HHHCCCCCCEEEEECCCCCCEEEEEECCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCC YDTNPKFSPNGKYIAWQSMERDGYESDRNRLCIYNLDDGQKTFVTESFESGVDDYCWNND CCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEECHHHCCCCHHCCCCC SQSLYFVGVWHGTSMVYSANLNGDIKKLTDGMYDYGSVAMAGDKIITKRHSISAADEIYT CCEEEEEEEEECCEEEEEECCCCCHHHHHCCCCCCCCEEECCCEEEEECCCCCCCCCEEE LTPADGQVAQLSHENDHIFKQLNLGKVEERWTKTTDGKQMLSWVIYPVNFDANKKYPTLL ECCCCCCEEEECCCCCHHHHHCCCCCHHHHHCCCCCHHEEEEEEEEEEECCCCCCCCEEE FCEGGPQSPVSQFWSYRWNFQIMAANDYIIIAPNRRGLPGFGMEWLEQISGDYGGQCMKD EECCCCCCHHHHHHCEEEEEEEEEECCEEEECCCCCCCCCCCHHHHHHHCCCCCCHHHHH YLSAIDDISKEPYVDTNRLGCVGASFGGFSVYWLAGHHDKRFKAFIAHDGIFNMEQQYLE HHHHHHHCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCEEEEEEECCCCCCHHHHHC TEEMWFANWDMGGAYWDKNNATAQRTFANSPHRFVDKWDTPILCIHGEKDYRILASQGMS HHHEEEEECCCCCEEECCCCCEEHHHHCCCCHHHHHCCCCCEEEEECCCCCEEEECCCCH AFNAAVLRGVPAELLLYPDENHWVLKPQNGVLWQRTFFSWLDKWLK HHHHHHHCCCCEEEEEEECCCCEEEECCCCEEEHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 3098560 [H]