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The map label for this gene is ftsY [H]

Identifier: 150005788

GI number: 150005788

Start: 4111650

End: 4112609

Strand: Direct

Name: ftsY [H]

Synonym: BVU_3281

Alternate gene names: 150005788

Gene position: 4111650-4112609 (Clockwise)

Preceding gene: 150005787

Following gene: 150005789

Centisome position: 79.63

GC content: 40.83

Gene sequence:

>960_bases
ATGGGATTTTTTAATTTTTTCTCAAAAGAAAAGAAGGAAACTTTAGACAAAGGATTGTCCAAAACCAAAGAAAGTGTATT
CAGTAAGATTGCCCGTGCCGTAGCGGGTAAATCAAAAGTAGACGATGAAGTATTGGATAATCTGGAAGAAGTGCTTATCA
CTTCGGATGTAGGCGTTGAAACAACTCTGAATATCATCAAACGCATTGAAGAAAGAGTTGCCAAAGATAAATATGTAAAC
ACTCAGGAACTGAACAAGATTCTCCGTGAAGAGATAGCGGCATTATTGACTGAAAATAACACGGTGGATTCGGATGATTT
CACTGTTCCGGAAGGTAAGAAGCCCTATGTCATCATGGTGGTAGGTGTAAACGGTGTGGGTAAAACCACAACCATTGGTA
AATTGGCATATCAATTTAAGAAGGCGGGCAAAACCGTCTATTTGGGTGCCGCTGATACATTCCGTGCTGCCGCCGTAGAA
CAATTGGATATTTGGGGAGAAAGAGTAGGAGTGCCTGTTATTAAACAGAAAATGGGATCAGATCCCGCATCTGTAGCTTT
TGATACCTTAAGTTCCGCCGTAGCTAATAATGCAGATGTAGTAATCATTGATACCGCAGGCCGACTTCACAATAAAGTAG
GTTTGATGAACGAGCTTACTAAAATCAAGAATGTGATGAAGAAAGTTGTTGCGGACGCACCTCACGAAGTATTATTGGTT
TTAGACGGTTCTACCGGTCAAAATGCATTTGAACAAGCCAAACAGTTTACTTTGGCGACAGAAGTTACTGCTATGGCAAT
TACCAAATTGGACGGAACAGCCAAAGGGGGCGTTGTAATTGGCATCTCAGAGCAGTTCAAGATTCCCGTAAAATATATTG
GATTGGGCGAAGGCATTGAAGACATGCAGGTATTCCGCAAAAAAGAATTTGTAGACTCACTATTTGGAGAGACTGAATAA

Upstream 100 bases:

>100_bases
CATCATAATACATTATGACCAATCATTGTGACACTTTTTTTTGTCCGTGTAAGAGATTAGTTATATCTTTGTAGCATAAA
CAGATAAATCAGACTCCAAT

Downstream 100 bases:

>100_bases
TAAATGAAACGTAACACAATAGATATCATCACCTTAGGGTGTTCCAAAAACTTAGTAGACTCAGAAAAGCTGATGCGTCA
GCTGGAAGCAAACGGTTATA

Product: recognition particle-docking protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MGFFNFFSKEKKETLDKGLSKTKESVFSKIARAVAGKSKVDDEVLDNLEEVLITSDVGVETTLNIIKRIEERVAKDKYVN
TQELNKILREEIAALLTENNTVDSDDFTVPEGKKPYVIMVVGVNGVGKTTTIGKLAYQFKKAGKTVYLGAADTFRAAAVE
QLDIWGERVGVPVIKQKMGSDPASVAFDTLSSAVANNADVVIIDTAGRLHNKVGLMNELTKIKNVMKKVVADAPHEVLLV
LDGSTGQNAFEQAKQFTLATEVTAMAITKLDGTAKGGVVIGISEQFKIPVKYIGLGEGIEDMQVFRKKEFVDSLFGETE

Sequences:

>Translated_319_residues
MGFFNFFSKEKKETLDKGLSKTKESVFSKIARAVAGKSKVDDEVLDNLEEVLITSDVGVETTLNIIKRIEERVAKDKYVN
TQELNKILREEIAALLTENNTVDSDDFTVPEGKKPYVIMVVGVNGVGKTTTIGKLAYQFKKAGKTVYLGAADTFRAAAVE
QLDIWGERVGVPVIKQKMGSDPASVAFDTLSSAVANNADVVIIDTAGRLHNKVGLMNELTKIKNVMKKVVADAPHEVLLV
LDGSTGQNAFEQAKQFTLATEVTAMAITKLDGTAKGGVVIGISEQFKIPVKYIGLGEGIEDMQVFRKKEFVDSLFGETE
>Mature_318_residues
GFFNFFSKEKKETLDKGLSKTKESVFSKIARAVAGKSKVDDEVLDNLEEVLITSDVGVETTLNIIKRIEERVAKDKYVNT
QELNKILREEIAALLTENNTVDSDDFTVPEGKKPYVIMVVGVNGVGKTTTIGKLAYQFKKAGKTVYLGAADTFRAAAVEQ
LDIWGERVGVPVIKQKMGSDPASVAFDTLSSAVANNADVVIIDTAGRLHNKVGLMNELTKIKNVMKKVVADAPHEVLLVL
DGSTGQNAFEQAKQFTLATEVTAMAITKLDGTAKGGVVIGISEQFKIPVKYIGLGEGIEDMQVFRKKEFVDSLFGETE

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the cytoplasmic membrane. Binds to the ribosome in the presence of the SRP particle and a non-hydrolyzable GTP analog. This abolishes trigger f

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=298, Percent_Identity=29.1946308724832, Blast_Score=134, Evalue=1e-31,
Organism=Homo sapiens, GI226371618, Length=207, Percent_Identity=35.2657004830918, Blast_Score=128, Evalue=6e-30,
Organism=Homo sapiens, GI23308697, Length=304, Percent_Identity=27.9605263157895, Blast_Score=112, Evalue=5e-25,
Organism=Homo sapiens, GI295424842, Length=304, Percent_Identity=27.9605263157895, Blast_Score=112, Evalue=6e-25,
Organism=Homo sapiens, GI89061728, Length=136, Percent_Identity=32.3529411764706, Blast_Score=82, Evalue=6e-16,
Organism=Escherichia coli, GI1789874, Length=311, Percent_Identity=50.8038585209003, Blast_Score=289, Evalue=2e-79,
Organism=Escherichia coli, GI1788963, Length=300, Percent_Identity=32, Blast_Score=149, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI17539958, Length=285, Percent_Identity=31.9298245614035, Blast_Score=131, Evalue=5e-31,
Organism=Caenorhabditis elegans, GI193206261, Length=317, Percent_Identity=28.7066246056782, Blast_Score=105, Evalue=3e-23,
Organism=Saccharomyces cerevisiae, GI6325345, Length=208, Percent_Identity=38.4615384615385, Blast_Score=143, Evalue=3e-35,
Organism=Saccharomyces cerevisiae, GI6320498, Length=340, Percent_Identity=26.4705882352941, Blast_Score=95, Evalue=1e-20,
Organism=Drosophila melanogaster, GI17647949, Length=304, Percent_Identity=29.9342105263158, Blast_Score=127, Evalue=1e-29,
Organism=Drosophila melanogaster, GI24641198, Length=259, Percent_Identity=26.6409266409266, Blast_Score=90, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 34715; Mature: 34584

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFFNFFSKEKKETLDKGLSKTKESVFSKIARAVAGKSKVDDEVLDNLEEVLITSDVGVE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHH
TTLNIIKRIEERVAKDKYVNTQELNKILREEIAALLTENNTVDSDDFTVPEGKKPYVIMV
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEE
VGVNGVGKTTTIGKLAYQFKKAGKTVYLGAADTFRAAAVEQLDIWGERVGVPVIKQKMGS
EECCCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHCC
DPASVAFDTLSSAVANNADVVIIDTAGRLHNKVGLMNELTKIKNVMKKVVADAPHEVLLV
CHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
LDGSTGQNAFEQAKQFTLATEVTAMAITKLDGTAKGGVVIGISEQFKIPVKYIGLGEGIE
EECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEEECCCCHH
DMQVFRKKEFVDSLFGETE
HHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GFFNFFSKEKKETLDKGLSKTKESVFSKIARAVAGKSKVDDEVLDNLEEVLITSDVGVE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHH
TTLNIIKRIEERVAKDKYVNTQELNKILREEIAALLTENNTVDSDDFTVPEGKKPYVIMV
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEE
VGVNGVGKTTTIGKLAYQFKKAGKTVYLGAADTFRAAAVEQLDIWGERVGVPVIKQKMGS
EECCCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHCC
DPASVAFDTLSSAVANNADVVIIDTAGRLHNKVGLMNELTKIKNVMKKVVADAPHEVLLV
CHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
LDGSTGQNAFEQAKQFTLATEVTAMAITKLDGTAKGGVVIGISEQFKIPVKYIGLGEGIE
EECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEEECCCCHH
DMQVFRKKEFVDSLFGETE
HHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3025556; 8041620; 9278503; 2161989; 8194520; 9002525 [H]