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The map label for this gene is ntrY [H]

Identifier: 150005687

GI number: 150005687

Start: 4003664

End: 4004995

Strand: Direct

Name: ntrY [H]

Synonym: BVU_3177

Alternate gene names: 150005687

Gene position: 4003664-4004995 (Clockwise)

Preceding gene: 150005686

Following gene: 150005688

Centisome position: 77.54

GC content: 36.71

Gene sequence:

>1332_bases
ATGAGTCGTTTACAAACTTTACGGATGATAGCTTGTATGTTATTAATGGGGGTAGTAGCTATAGCTGCATATCTCTTTTA
TCAACATTCGCTCTATTTTTGCTTGTTTTTTTCGCTGATGATTATGGCAGGTATTATCATTTATATCTGTCAGTGGCAGT
ATAAAACGACCCGTATGATATCGCGAATGATAGAAGGTATTCGTTATGCAGATTTCTCTTTGAGTTTTTCTACCCAGCAC
AAAACTCGTACAGAACAACGATTGGCACAAGAAATAAATAATGTTGTTGCTGAATTCCGTACTCGGTTGTCCGAGAATGA
AGAGCGATATCAATATTATGAAACATTATTGAATACTGTTGACAGCAGTTTGCTGGTAGTAGATAGTCAGTGCAATATAC
ATTGGATGAACCGGGCAGCCATGCAGGATTTGTGCGGTTATCGTATTCATTCTGTCAGGGAATTGGCTCTGTTAAATTCT
GATTTTCCTACTATTATCCTGTCATTACAGCCTGGAGAGATTAAAACAGTACGAATACATAAAGGAGATATTATACAAGA
ATTGGCTGTTACGGTATCTGAATATTCCGCTCAACATGGTACGGAACTCCGGTTGGTTAATTTAAAGAATATCCATGCTG
TATTGGAGGAAAATGAGATGGAAGCATGGCAGAAGCTGATTCGTGTACTCACTCATGAAATAATGAACTCCATTGCGCCC
ATTATTTCATTAAGTGAAACATTAAGTGAGCGTGCTGTACAAAATGGTATGAATGAGAGAGATTACAATATCATGTTGCA
AGGGATGCAGACTATTCATAGAAGAAGTAAAGGGTTGCTGAATTTTGTGGAAAACTATCGTAAACTTTCTCGTCTGTCTG
CTCCGATACTGGCTCCAGTAAATATAGGTGATTTACTGAGTGATATGAAAAAACTGTTTCCTAATAAAAACATACAATAT
ATATATAAAGTAGAAAACCCAGAAACGACACTGATGCTGGATCGTTCACAGATAGAACAAGTATTAATCAATTTACTAAA
GAATGCAGGTGAGGCTTGTGTAGAGCAAATCTATCCCGAAGTTATCATTAGCACACATTGTGATTTAGAAAAACATCTAT
TTTTCCTTTCTGTCTGTGATAATGGTAGTGGCATTCTTCCAGAAGTATTGGATAAAATCTTTGTTCCTTTTTTTACAACG
AAGCCAACAGGTAGTGGTATAGGACTCAGTTTATGCAAACAAATTATGAATTTACATGGTGGAAGTATCTCGGCGAGTAG
TGAAATCGGAAAGGGGAGTTGTTTTACACTGAAATTTCTTTGTTGCGGATAA

Upstream 100 bases:

>100_bases
AACGTGCTATGAAACGCAGCGAAGGGAACTTGAGTCGTGCAGCGGAATATTTGGGGATTACCCGTTACGCTCTTTATCGG
AAACTTGAAAAATTAGGGTT

Downstream 100 bases:

>100_bases
AAAAAGTTTTAAGGTTAATGTTTTGATTTATAATTTGATAAGTAATGATGCGAAAAAAAAGTAGAAAAAAATCGCTTTAA
ATATTTGCATATATAAAAAA

Product: two-component system sensor histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 443; Mature: 442

Protein sequence:

>443_residues
MSRLQTLRMIACMLLMGVVAIAAYLFYQHSLYFCLFFSLMIMAGIIIYICQWQYKTTRMISRMIEGIRYADFSLSFSTQH
KTRTEQRLAQEINNVVAEFRTRLSENEERYQYYETLLNTVDSSLLVVDSQCNIHWMNRAAMQDLCGYRIHSVRELALLNS
DFPTIILSLQPGEIKTVRIHKGDIIQELAVTVSEYSAQHGTELRLVNLKNIHAVLEENEMEAWQKLIRVLTHEIMNSIAP
IISLSETLSERAVQNGMNERDYNIMLQGMQTIHRRSKGLLNFVENYRKLSRLSAPILAPVNIGDLLSDMKKLFPNKNIQY
IYKVENPETTLMLDRSQIEQVLINLLKNAGEACVEQIYPEVIISTHCDLEKHLFFLSVCDNGSGILPEVLDKIFVPFFTT
KPTGSGIGLSLCKQIMNLHGGSISASSEIGKGSCFTLKFLCCG

Sequences:

>Translated_443_residues
MSRLQTLRMIACMLLMGVVAIAAYLFYQHSLYFCLFFSLMIMAGIIIYICQWQYKTTRMISRMIEGIRYADFSLSFSTQH
KTRTEQRLAQEINNVVAEFRTRLSENEERYQYYETLLNTVDSSLLVVDSQCNIHWMNRAAMQDLCGYRIHSVRELALLNS
DFPTIILSLQPGEIKTVRIHKGDIIQELAVTVSEYSAQHGTELRLVNLKNIHAVLEENEMEAWQKLIRVLTHEIMNSIAP
IISLSETLSERAVQNGMNERDYNIMLQGMQTIHRRSKGLLNFVENYRKLSRLSAPILAPVNIGDLLSDMKKLFPNKNIQY
IYKVENPETTLMLDRSQIEQVLINLLKNAGEACVEQIYPEVIISTHCDLEKHLFFLSVCDNGSGILPEVLDKIFVPFFTT
KPTGSGIGLSLCKQIMNLHGGSISASSEIGKGSCFTLKFLCCG
>Mature_442_residues
SRLQTLRMIACMLLMGVVAIAAYLFYQHSLYFCLFFSLMIMAGIIIYICQWQYKTTRMISRMIEGIRYADFSLSFSTQHK
TRTEQRLAQEINNVVAEFRTRLSENEERYQYYETLLNTVDSSLLVVDSQCNIHWMNRAAMQDLCGYRIHSVRELALLNSD
FPTIILSLQPGEIKTVRIHKGDIIQELAVTVSEYSAQHGTELRLVNLKNIHAVLEENEMEAWQKLIRVLTHEIMNSIAPI
ISLSETLSERAVQNGMNERDYNIMLQGMQTIHRRSKGLLNFVENYRKLSRLSAPILAPVNIGDLLSDMKKLFPNKNIQYI
YKVENPETTLMLDRSQIEQVLINLLKNAGEACVEQIYPEVIISTHCDLEKHLFFLSVCDNGSGILPEVLDKIFVPFFTTK
PTGSGIGLSLCKQIMNLHGGSISASSEIGKGSCFTLKFLCCG

Specific function: Member of the two-component regulatory system ntrY/ntrX involved in nitrogen level control. Probably activates ntrX by phosphorylation [H]

COG id: COG5000

COG function: function code T; Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1790436, Length=233, Percent_Identity=30.4721030042918, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1788549, Length=381, Percent_Identity=24.9343832020997, Blast_Score=93, Evalue=4e-20,
Organism=Escherichia coli, GI1790300, Length=349, Percent_Identity=24.9283667621776, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI48994928, Length=229, Percent_Identity=27.5109170305677, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1786912, Length=133, Percent_Identity=33.0827067669173, Blast_Score=66, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003660
- InterPro:   IPR000014
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082
- InterPro:   IPR017232 [H]

Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 50522; Mature: 50390

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRLQTLRMIACMLLMGVVAIAAYLFYQHSLYFCLFFSLMIMAGIIIYICQWQYKTTRMI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
SRMIEGIRYADFSLSFSTQHKTRTEQRLAQEINNVVAEFRTRLSENEERYQYYETLLNTV
HHHHHHCEECCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
DSSLLVVDSQCNIHWMNRAAMQDLCGYRIHSVRELALLNSDFPTIILSLQPGEIKTVRIH
CCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEE
KGDIIQELAVTVSEYSAQHGTELRLVNLKNIHAVLEENEMEAWQKLIRVLTHEIMNSIAP
CCHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IISLSETLSERAVQNGMNERDYNIMLQGMQTIHRRSKGLLNFVENYRKLSRLSAPILAPV
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
NIGDLLSDMKKLFPNKNIQYIYKVENPETTLMLDRSQIEQVLINLLKNAGEACVEQIYPE
CHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECHHHHHHHHHHHHHCCHHHHHHHHHHH
VIISTHCDLEKHLFFLSVCDNGSGILPEVLDKIFVPFFTTKPTGSGIGLSLCKQIMNLHG
HHHHCCCCHHHCEEEEEEECCCCCCHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHCCC
GSISASSEIGKGSCFTLKFLCCG
CCCCCCCCCCCCCEEEEEEEECC
>Mature Secondary Structure 
SRLQTLRMIACMLLMGVVAIAAYLFYQHSLYFCLFFSLMIMAGIIIYICQWQYKTTRMI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
SRMIEGIRYADFSLSFSTQHKTRTEQRLAQEINNVVAEFRTRLSENEERYQYYETLLNTV
HHHHHHCEECCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
DSSLLVVDSQCNIHWMNRAAMQDLCGYRIHSVRELALLNSDFPTIILSLQPGEIKTVRIH
CCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEE
KGDIIQELAVTVSEYSAQHGTELRLVNLKNIHAVLEENEMEAWQKLIRVLTHEIMNSIAP
CCHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IISLSETLSERAVQNGMNERDYNIMLQGMQTIHRRSKGLLNFVENYRKLSRLSAPILAPV
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
NIGDLLSDMKKLFPNKNIQYIYKVENPETTLMLDRSQIEQVLINLLKNAGEACVEQIYPE
CHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECHHHHHHHHHHHHHCCHHHHHHHHHHH
VIISTHCDLEKHLFFLSVCDNGSGILPEVLDKIFVPFFTTKPTGSGIGLSLCKQIMNLHG
HHHHCCCCHHHCEEEEEEECCCCCCHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHCCC
GSISASSEIGKGSCFTLKFLCCG
CCCCCCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1661370 [H]