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The map label for this gene is gidB

Identifier: 150005537

GI number: 150005537

Start: 3827653

End: 3828282

Strand: Reverse

Name: gidB

Synonym: BVU_3021

Alternate gene names: 150005537

Gene position: 3828282-3827653 (Counterclockwise)

Preceding gene: 150005538

Following gene: 150005536

Centisome position: 74.15

GC content: 41.59

Gene sequence:

>630_bases
ATGGAATTAATACTGAAATATTTCCCTAACCTCAGCGAACAGCAGAAAACACAGTTTGCCGCATTGTATGATTTATATAC
GGATTGGAATAGCAAAATCAATGTAATCTCACGCAAGGATATCACTAATCTGTACGAACATCATGTATTGCACTCGCTAG
GCATAGCCAAAGTGATAAACTTCACCCCTGATACCCAAATTATGGACTTGGGCACAGGGGGCGGTTTCCCGGGTATCCCT
TTGGCCATCTTATTCCCTGAAGTCCAATTCCATCTGGTGGACAGTATCGGAAAGAAAGTGAAAGTAGCTACAGAAATAGC
CAATGCTATCGGACTGAAGAATGTCACTTTCCGTCATTGCCGCGCCGAAGAAGAAAAAAGGAAATTCGACTTCGTGGTAA
GTCGTGCTGTCATGCCTTTGGGCGATCTAATAAAAATTATCCGTAAAAACATCAGACAAGAACAACATAACGCCCTGCCC
AACGGGCTGATTTGTCTGAAAGGCGGAGAGTTGGAACAAGAAACAATGCCCGTGAAGCACAAAACAATGCTTTATGATCT
GAAAAATGAATTCACGGAAGATTTTTTTAAAACCAAGAAAGTGGTTTATGTAACCATCAGCGGTTTATAA

Upstream 100 bases:

>100_bases
ATGATATCGCTCCCTATGCTGTAGGAGTCATCACCCTTTCTTTGCCCTACACATCGGTAGAAAAATATATGATACATTAA
ATAACGATTTTAAGTATAGA

Downstream 100 bases:

>100_bases
TTATAGATAAAAAAAACATGAAAATAAAGAAATTTGAATTCAATATGTTTCCGGTAAACTGCTACGTGCTATCGGACGAA
ACAAAGGAAGCCGTCATTAT

Product: 16S rRNA methyltransferase GidB

Products: NA

Alternate protein names: 16S rRNA 7-methylguanosine methyltransferase; 16S rRNA m7G methyltransferase

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MELILKYFPNLSEQQKTQFAALYDLYTDWNSKINVISRKDITNLYEHHVLHSLGIAKVINFTPDTQIMDLGTGGGFPGIP
LAILFPEVQFHLVDSIGKKVKVATEIANAIGLKNVTFRHCRAEEEKRKFDFVVSRAVMPLGDLIKIIRKNIRQEQHNALP
NGLICLKGGELEQETMPVKHKTMLYDLKNEFTEDFFKTKKVVYVTISGL

Sequences:

>Translated_209_residues
MELILKYFPNLSEQQKTQFAALYDLYTDWNSKINVISRKDITNLYEHHVLHSLGIAKVINFTPDTQIMDLGTGGGFPGIP
LAILFPEVQFHLVDSIGKKVKVATEIANAIGLKNVTFRHCRAEEEKRKFDFVVSRAVMPLGDLIKIIRKNIRQEQHNALP
NGLICLKGGELEQETMPVKHKTMLYDLKNEFTEDFFKTKKVVYVTISGL
>Mature_209_residues
MELILKYFPNLSEQQKTQFAALYDLYTDWNSKINVISRKDITNLYEHHVLHSLGIAKVINFTPDTQIMDLGTGGGFPGIP
LAILFPEVQFHLVDSIGKKVKVATEIANAIGLKNVTFRHCRAEEEKRKFDFVVSRAVMPLGDLIKIIRKNIRQEQHNALP
NGLICLKGGELEQETMPVKHKTMLYDLKNEFTEDFFKTKKVVYVTISGL

Specific function: Specifically methylates the N7 position of a guanosine in 16S rRNA

COG id: COG0357

COG function: function code M; Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RNA methyltransferase rsmG family

Homologues:

Organism=Escherichia coli, GI1790179, Length=137, Percent_Identity=34.3065693430657, Blast_Score=92, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RSMG_BACV8 (A6L4P5)

Other databases:

- EMBL:   CP000139
- RefSeq:   YP_001300281.1
- ProteinModelPortal:   A6L4P5
- SMR:   A6L4P5
- STRING:   A6L4P5
- GeneID:   5303982
- GenomeReviews:   CP000139_GR
- KEGG:   bvu:BVU_3021
- NMPDR:   fig|435590.6.peg.2828
- eggNOG:   COG0357
- HOGENOM:   HBG308018
- OMA:   ICLKGGE
- ProtClustDB:   PRK00107
- GO:   GO:0005737
- HAMAP:   MF_00074
- InterPro:   IPR003682
- PIRSF:   PIRSF003078
- TIGRFAMs:   TIGR00138

Pfam domain/function: PF02527 GidB

EC number: 2.1.-.- [C]

Molecular weight: Translated: 23834; Mature: 23834

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELILKYFPNLSEQQKTQFAALYDLYTDWNSKINVISRKDITNLYEHHVLHSLGIAKVIN
CCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHC
FTPDTQIMDLGTGGGFPGIPLAILFPEVQFHLVDSIGKKVKVATEIANAIGLKNVTFRHC
CCCCCEEEEECCCCCCCCCCCEEECHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHH
RAEEEKRKFDFVVSRAVMPLGDLIKIIRKNIRQEQHNALPNGLICLKGGELEQETMPVKH
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHCCCHH
KTMLYDLKNEFTEDFFKTKKVVYVTISGL
HHHHHHHHHHHHHHHHHCCEEEEEEEECC
>Mature Secondary Structure
MELILKYFPNLSEQQKTQFAALYDLYTDWNSKINVISRKDITNLYEHHVLHSLGIAKVIN
CCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHC
FTPDTQIMDLGTGGGFPGIPLAILFPEVQFHLVDSIGKKVKVATEIANAIGLKNVTFRHC
CCCCCEEEEECCCCCCCCCCCEEECHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHH
RAEEEKRKFDFVVSRAVMPLGDLIKIIRKNIRQEQHNALPNGLICLKGGELEQETMPVKH
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHCCCHH
KTMLYDLKNEFTEDFFKTKKVVYVTISGL
HHHHHHHHHHHHHHHHHCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA