Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
---|---|
Accession | NC_009614 |
Length | 5,163,189 |
Click here to switch to the map view.
The map label for this gene is hcp [H]
Identifier: 150005497
GI number: 150005497
Start: 3776764
End: 3778434
Strand: Reverse
Name: hcp [H]
Synonym: BVU_2981
Alternate gene names: 150005497
Gene position: 3778434-3776764 (Counterclockwise)
Preceding gene: 150005499
Following gene: 150005496
Centisome position: 73.18
GC content: 43.57
Gene sequence:
>1671_bases ATGAAAAAAGATATGGAGAATAACATGTTTTGTTTCCAATGTCAGGAAACGGCCAAAGGTTTCGGTTGCACCTTAAAAGG TGTTTGTGGAAAAAATGCAACTACAGCACGTACCATGGATTTATTGCTCTTTGTAGTACGAGGAATTTCTGTTGTGGCGG ATCAATTGCGCCAGCATTCCCTCCCCGTTGAAAAAGAAGTGGACAATTTCATTGTAGACGCCTTATTCTGTACCATTACC AATGCCAATTTCGATGACGAAAGCATTACGAAACGCATTGACAAAGGATTAGCAATACGTGATGACCTTAAGCATCAAGC CTCTGCCAAGGACATTCCTCTGCCGGAAGCCGATGAATTAAATTGGAAAGGCAGCCACGATGAATATGATGCAAAAGCCG CAACAGTCGGCGTATTACGTGAACAAAACGAGGATCTACGCTCTTTAAAAGAACTGATTATGTATGGTCTGAAAGGAATG GCTGCTTATCTGGAACATGCCATGAGGTTAGGACATAATGACGAAAGTATTCATCGTTTCATGCAGAACACCATCGCACA AATTACAACAAAATCTTTATCGGCTGATGAACTGACTGTATTAGCACTGAAAACAGGTGAAATAGGCGTTCGAACAATGG CTCTGCTCGACAAGGCAAATACTTCCAGGTATGGCAATCCGGAAATTACCCATGTAAATATAGGAACAGGTACTCGCCCC GGTATTCTGATAAGCGGACATGACCTGCATGATCTGGAAGAATTGTTGGAACAAACCAAAGACAGTGGCGTGGACGTATA TACTCACGGTGAAATGCTTCCTGCACATTACTATCCGGCATTTAAAAAATATACACATTTTGCAGGAAACTATGGAAATG CCTGGTGGAAACAACGGGAGGAGTTTACCTCGTTCAATGGTCCTATCCTGTTCACAACCAACTGCATCGTTCCCCCTCTG CCCAATGCCACTTATAAAGAACGCATGTTTACCACTAATTCTACCGGATATCCCGGCTGCAAGCATATTACAGCAGACGA GAAAGGACATAAGGACTATACTGAAATTATAGAAACAGCCAAACAATGTGCCGCACCGACAGAAATAGAACATGGAGAAA TCGTTGGTGGTTTTGCCCATAATCAGGTATTACAACTAGCAGACAAGGTCGTAGAAGCGGTAAAGAGCGGAGCTATCCGT AAGTTCATCGTCATGGCAGGTTGTGACGGACGTATGCGCAGTCGTGATTACTACACCACTTTTGCCGAGATGCTCCCCAA AGACACAGTCATTTTGACTGCGGGATGTGCTAAATATCGTTATAACAAACTAGGGTTAGGTGACATTAATGGCATTCCGC GTGTTTTGGACGCAGGACAATGTAACGATAGCTATTCATTGGCAGTCATCGCCCTCAAACTGAAGGAAGTATTCGGGCTA CATGACATCAATGAACTGCCCATTGTTTACAATATCGCCTGGTATGAACAGAAAGCGGTAATCGTATTGCTGGCATTACT CAGTTTGGGCATAAAAGAGATTCATCTTGGTCCCACCTTACCCGCATTCCTCTCGCCCAACGTGACGAAAGTACTGGTCG AAAACTTTGGAGTAAGCGGTATCGGTACAGTAGAAAGTGATATGAGAAAATGGGGATTAACGAACGGATAA
Upstream 100 bases:
>100_bases TACTTTCTTTTAACTGTTATTTGTATCCGCTGTAACATATGGTACAACTTAAAAGACGAAAACCGTCTACTTTTGCACAA AAGTAATAGAAATCATTAAA
Downstream 100 bases:
>100_bases ACGGAATAATTATGAAACAGAAAAATTACCATTCATGTACAGTCGGACAAATTGTAGCCGGCAACTTTGATACAACCAAA GTATTCTCCCGTTACCATAT
Product: hydroxylamine reductase
Products: NA
Alternate protein names: Hybrid-cluster protein; HCP [H]
Number of amino acids: Translated: 556; Mature: 556
Protein sequence:
>556_residues MKKDMENNMFCFQCQETAKGFGCTLKGVCGKNATTARTMDLLLFVVRGISVVADQLRQHSLPVEKEVDNFIVDALFCTIT NANFDDESITKRIDKGLAIRDDLKHQASAKDIPLPEADELNWKGSHDEYDAKAATVGVLREQNEDLRSLKELIMYGLKGM AAYLEHAMRLGHNDESIHRFMQNTIAQITTKSLSADELTVLALKTGEIGVRTMALLDKANTSRYGNPEITHVNIGTGTRP GILISGHDLHDLEELLEQTKDSGVDVYTHGEMLPAHYYPAFKKYTHFAGNYGNAWWKQREEFTSFNGPILFTTNCIVPPL PNATYKERMFTTNSTGYPGCKHITADEKGHKDYTEIIETAKQCAAPTEIEHGEIVGGFAHNQVLQLADKVVEAVKSGAIR KFIVMAGCDGRMRSRDYYTTFAEMLPKDTVILTAGCAKYRYNKLGLGDINGIPRVLDAGQCNDSYSLAVIALKLKEVFGL HDINELPIVYNIAWYEQKAVIVLLALLSLGIKEIHLGPTLPAFLSPNVTKVLVENFGVSGIGTVESDMRKWGLTNG
Sequences:
>Translated_556_residues MKKDMENNMFCFQCQETAKGFGCTLKGVCGKNATTARTMDLLLFVVRGISVVADQLRQHSLPVEKEVDNFIVDALFCTIT NANFDDESITKRIDKGLAIRDDLKHQASAKDIPLPEADELNWKGSHDEYDAKAATVGVLREQNEDLRSLKELIMYGLKGM AAYLEHAMRLGHNDESIHRFMQNTIAQITTKSLSADELTVLALKTGEIGVRTMALLDKANTSRYGNPEITHVNIGTGTRP GILISGHDLHDLEELLEQTKDSGVDVYTHGEMLPAHYYPAFKKYTHFAGNYGNAWWKQREEFTSFNGPILFTTNCIVPPL PNATYKERMFTTNSTGYPGCKHITADEKGHKDYTEIIETAKQCAAPTEIEHGEIVGGFAHNQVLQLADKVVEAVKSGAIR KFIVMAGCDGRMRSRDYYTTFAEMLPKDTVILTAGCAKYRYNKLGLGDINGIPRVLDAGQCNDSYSLAVIALKLKEVFGL HDINELPIVYNIAWYEQKAVIVLLALLSLGIKEIHLGPTLPAFLSPNVTKVLVENFGVSGIGTVESDMRKWGLTNG >Mature_556_residues MKKDMENNMFCFQCQETAKGFGCTLKGVCGKNATTARTMDLLLFVVRGISVVADQLRQHSLPVEKEVDNFIVDALFCTIT NANFDDESITKRIDKGLAIRDDLKHQASAKDIPLPEADELNWKGSHDEYDAKAATVGVLREQNEDLRSLKELIMYGLKGM AAYLEHAMRLGHNDESIHRFMQNTIAQITTKSLSADELTVLALKTGEIGVRTMALLDKANTSRYGNPEITHVNIGTGTRP GILISGHDLHDLEELLEQTKDSGVDVYTHGEMLPAHYYPAFKKYTHFAGNYGNAWWKQREEFTSFNGPILFTTNCIVPPL PNATYKERMFTTNSTGYPGCKHITADEKGHKDYTEIIETAKQCAAPTEIEHGEIVGGFAHNQVLQLADKVVEAVKSGAIR KFIVMAGCDGRMRSRDYYTTFAEMLPKDTVILTAGCAKYRYNKLGLGDINGIPRVLDAGQCNDSYSLAVIALKLKEVFGL HDINELPIVYNIAWYEQKAVIVLLALLSLGIKEIHLGPTLPAFLSPNVTKVLVENFGVSGIGTVESDMRKWGLTNG
Specific function: Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O [H]
COG id: COG1151
COG function: function code C; 6Fe-6S prismane cluster-containing protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HCP family [H]
Homologues:
Organism=Escherichia coli, GI87081794, Length=561, Percent_Identity=40.9982174688057, Blast_Score=427, Evalue=1e-121,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010048 - InterPro: IPR004137 - InterPro: IPR011254 - InterPro: IPR016099 - InterPro: IPR016100 [H]
Pfam domain/function: PF03063 Prismane [H]
EC number: NA
Molecular weight: Translated: 61634; Mature: 61634
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKDMENNMFCFQCQETAKGFGCTLKGVCGKNATTARTMDLLLFVVRGISVVADQLRQHS CCCCCCCCEEEEEEHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC LPVEKEVDNFIVDALFCTITNANFDDESITKRIDKGLAIRDDLKHQASAKDIPLPEADEL CCHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCC NWKGSHDEYDAKAATVGVLREQNEDLRSLKELIMYGLKGMAAYLEHAMRLGHNDESIHRF CCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH MQNTIAQITTKSLSADELTVLALKTGEIGVRTMALLDKANTSRYGNPEITHVNIGTGTRP HHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCC GILISGHDLHDLEELLEQTKDSGVDVYTHGEMLPAHYYPAFKKYTHFAGNYGNAWWKQRE CEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHH EFTSFNGPILFTTNCIVPPLPNATYKERMFTTNSTGYPGCKHITADEKGHKDYTEIIETA HHHCCCCCEEEEECCCCCCCCCCCHHHHEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHH KQCAAPTEIEHGEIVGGFAHNQVLQLADKVVEAVKSGAIRKFIVMAGCDGRMRSRDYYTT HHHCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHH FAEMLPKDTVILTAGCAKYRYNKLGLGDINGIPRVLDAGQCNDSYSLAVIALKLKEVFGL HHHHCCCCCEEEEECHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHCC HDINELPIVYNIAWYEQKAVIVLLALLSLGIKEIHLGPTLPAFLSPNVTKVLVENFGVSG CCCCCCCEEEEEEHHHHHHHHHHHHHHHCCHHEEECCCCCHHHHCCCHHHHHHHHCCCCC IGTVESDMRKWGLTNG CCHHHHHHHHCCCCCC >Mature Secondary Structure MKKDMENNMFCFQCQETAKGFGCTLKGVCGKNATTARTMDLLLFVVRGISVVADQLRQHS CCCCCCCCEEEEEEHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC LPVEKEVDNFIVDALFCTITNANFDDESITKRIDKGLAIRDDLKHQASAKDIPLPEADEL CCHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCC NWKGSHDEYDAKAATVGVLREQNEDLRSLKELIMYGLKGMAAYLEHAMRLGHNDESIHRF CCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH MQNTIAQITTKSLSADELTVLALKTGEIGVRTMALLDKANTSRYGNPEITHVNIGTGTRP HHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCC GILISGHDLHDLEELLEQTKDSGVDVYTHGEMLPAHYYPAFKKYTHFAGNYGNAWWKQRE CEEEECCCHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHH EFTSFNGPILFTTNCIVPPLPNATYKERMFTTNSTGYPGCKHITADEKGHKDYTEIIETA HHHCCCCCEEEEECCCCCCCCCCCHHHHEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHH KQCAAPTEIEHGEIVGGFAHNQVLQLADKVVEAVKSGAIRKFIVMAGCDGRMRSRDYYTT HHHCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHH FAEMLPKDTVILTAGCAKYRYNKLGLGDINGIPRVLDAGQCNDSYSLAVIALKLKEVFGL HHHHCCCCCEEEEECHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHCC HDINELPIVYNIAWYEQKAVIVLLALLSLGIKEIHLGPTLPAFLSPNVTKVLVENFGVSG CCCCCCCEEEEEEHHHHHHHHHHHHHHHCCHHEEECCCCCHHHHCCCHHHHHHHHCCCCC IGTVESDMRKWGLTNG CCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA