Click here to switch to the map view.

The map label for this gene is ytfE [C]

Identifier: 150005496

GI number: 150005496

Start: 3776021

End: 3776752

Strand: Reverse

Name: ytfE [C]

Synonym: BVU_2980

Alternate gene names: 150005496

Gene position: 3776752-3776021 (Counterclockwise)

Preceding gene: 150005497

Following gene: 150005494

Centisome position: 73.15

GC content: 40.3

Gene sequence:

>732_bases
ATGAAACAGAAAAATTACCATTCATGTACAGTCGGACAAATTGTAGCCGGCAACTTTGATACAACCAAAGTATTCTCCCG
TTACCATATTGATTTTTGCTGCCATGGCAATACTCCGTTTGCAGAAGCCTGCCGGAACCGTGGTATTGATCCCGAAGCAG
TAGCACATGAATTAAATGAATTACAAGAGAATACGGTTAGTAATGCTCCTGACTTTGCCGGATGGCCCATCGATTTATTA
ATAGACTATGTATTGAAAATACACCATCGGGGAATCCGTGCCAAAGGTCCGCAAATAGAAGCATTATTAACCAAAGTAAC
CGAAGCGCATTCAAAGAATCATCCAGAGTTACTGCAAGTCCAGGCACTGTTCCGCGACTCGCTTCTTGATTTGGAAAATC
ATTTATCAAAAGAAGAGAATGTATTATTTCCTTATGTTTATGAAATGTTCCAAGCCAAAGAGGAAGGCTTGAAAGTAGCT
AAATTCCATTGCGGCACCATTCTGTATCCCATCGAAGTGATGGAAGATGAACATAATCACGAAGGAGAACGTTTTGAAAA
AATCTCTTCATTAACCAACGGATTCACCGCCCCTGAAGATGCTTGTGCCAGCTTCCGCTTGGTTTTACAACAATTGAAAC
AATTTGAAGAGGCATTACATGAACATATCCACCTGGAAAACAATATCATTTTTCCCAGAGCATTAGAATTGGAAAAGAAG
GAAGCCATCTGA

Upstream 100 bases:

>100_bases
TGACGAAAGTACTGGTCGAAAACTTTGGAGTAAGCGGTATCGGTACAGTAGAAAGTGATATGAGAAAATGGGGATTAACG
AACGGATAAACGGAATAATT

Downstream 100 bases:

>100_bases
TAACTACACCATGACACTTCCATTCACAAAAGTGCCCAAAGTGAAATAATGCACAAATCACTTTGGGCATCTTCATGTAT
TATAACCCACGCTCCACTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MKQKNYHSCTVGQIVAGNFDTTKVFSRYHIDFCCHGNTPFAEACRNRGIDPEAVAHELNELQENTVSNAPDFAGWPIDLL
IDYVLKIHHRGIRAKGPQIEALLTKVTEAHSKNHPELLQVQALFRDSLLDLENHLSKEENVLFPYVYEMFQAKEEGLKVA
KFHCGTILYPIEVMEDEHNHEGERFEKISSLTNGFTAPEDACASFRLVLQQLKQFEEALHEHIHLENNIIFPRALELEKK
EAI

Sequences:

>Translated_243_residues
MKQKNYHSCTVGQIVAGNFDTTKVFSRYHIDFCCHGNTPFAEACRNRGIDPEAVAHELNELQENTVSNAPDFAGWPIDLL
IDYVLKIHHRGIRAKGPQIEALLTKVTEAHSKNHPELLQVQALFRDSLLDLENHLSKEENVLFPYVYEMFQAKEEGLKVA
KFHCGTILYPIEVMEDEHNHEGERFEKISSLTNGFTAPEDACASFRLVLQQLKQFEEALHEHIHLENNIIFPRALELEKK
EAI
>Mature_243_residues
MKQKNYHSCTVGQIVAGNFDTTKVFSRYHIDFCCHGNTPFAEACRNRGIDPEAVAHELNELQENTVSNAPDFAGWPIDLL
IDYVLKIHHRGIRAKGPQIEALLTKVTEAHSKNHPELLQVQALFRDSLLDLENHLSKEENVLFPYVYEMFQAKEEGLKVA
KFHCGTILYPIEVMEDEHNHEGERFEKISSLTNGFTAPEDACASFRLVLQQLKQFEEALHEHIHLENNIIFPRALELEKK
EAI

Specific function: Unknown

COG id: COG2846

COG function: function code D; Regulator of cell morphogenesis and NO signaling

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ytfE [H]

Homologues:

Organism=Escherichia coli, GI1790654, Length=231, Percent_Identity=29.004329004329, Blast_Score=113, Evalue=9e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007500
- InterPro:   IPR019903
- InterPro:   IPR012312 [H]

Pfam domain/function: PF01814 Hemerythrin; PF04405 ScdA_N [H]

EC number: NA

Molecular weight: Translated: 27846; Mature: 27846

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQKNYHSCTVGQIVAGNFDTTKVFSRYHIDFCCHGNTPFAEACRNRGIDPEAVAHELNE
CCCCCCCCCCHHHEEECCCCHHHHHHHHEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHH
LQENTVSNAPDFAGWPIDLLIDYVLKIHHRGIRAKGPQIEALLTKVTEAHSKNHPELLQV
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHH
QALFRDSLLDLENHLSKEENVLFPYVYEMFQAKEEGLKVAKFHCGTILYPIEVMEDEHNH
HHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHCCEEEEEECCEEEEHHHHHCCCCCC
EGERFEKISSLTNGFTAPEDACASFRLVLQQLKQFEEALHEHIHLENNIIFPRALELEKK
CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHCCHHH
EAI
CCC
>Mature Secondary Structure
MKQKNYHSCTVGQIVAGNFDTTKVFSRYHIDFCCHGNTPFAEACRNRGIDPEAVAHELNE
CCCCCCCCCCHHHEEECCCCHHHHHHHHEEEEEECCCCCHHHHHHHCCCCHHHHHHHHHH
LQENTVSNAPDFAGWPIDLLIDYVLKIHHRGIRAKGPQIEALLTKVTEAHSKNHPELLQV
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHH
QALFRDSLLDLENHLSKEENVLFPYVYEMFQAKEEGLKVAKFHCGTILYPIEVMEDEHNH
HHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHCCEEEEEECCEEEEHHHHHCCCCCC
EGERFEKISSLTNGFTAPEDACASFRLVLQQLKQFEEALHEHIHLENNIIFPRALELEKK
CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHCCHHH
EAI
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]