Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
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Accession | NC_009614 |
Length | 5,163,189 |
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The map label for this gene is 150005475
Identifier: 150005475
GI number: 150005475
Start: 3755607
End: 3756125
Strand: Reverse
Name: 150005475
Synonym: BVU_2958
Alternate gene names: NA
Gene position: 3756125-3755607 (Counterclockwise)
Preceding gene: 150005477
Following gene: 150005450
Centisome position: 72.75
GC content: 54.91
Gene sequence:
>519_bases ATGATTCAAGAAACTTTCCCTATGATAATCGGTGAGGAAGAGATCCCGAACGAACGTGCTCTCCTCACTCAAGAGGCCGG CCCGATGATGGCATCCTCCGCTTCCGTGAAATATATCGTCATTCATTGCAGCACCACACGCTCCACCCGGGATTACACCG CCGAGCAACTGCTCCGTGACCACAAGACGCGAGGTTTCCGCACGGTGGGGTATCATTTTTATATCCGTCGTGACGGAAGT GTGACCCAGCACCGCAAGCTTCTGGAAGTGGGTGCGCACTGCCGCCCCTGGAACCGTTGCAGCATAGGCATCTGCTATGA GGGCGGGCTGGATGCGGACAGACGTCCGGCAGATACCCGGACACCGGAACAGACGGAACAATTTATTTTGTTGCTGATGC GGATGGTGAAAATCTTTCCCGGTGTCCGGATAAGGGGACACAGGGATATGCCGGGAAGTATCCCGAAGGCTTGTCCGTGT TTCGATGCGGAGGGGGTATTCGGGTACTTGGAGAAATAA
Upstream 100 bases:
>100_bases ACCGCCTTGGGCGTAACCAGTTGCACCACTCTCTTTTAAAAAGCCCCCTGGCCCATCGCATGACACTTTTTAATTTTTAA TTCCCTATTTCAATTCAACC
Downstream 100 bases:
>100_bases TAAAGAAAGTGGCAATCACCATGCAGTTTCTTCTTTGGGGGAAACTGCATGGAGAATGCCCTTACGTATGATTTGTTTTT CTTTGTAGAAAGGTTTTACA
Product: putative N-acetylmuramoyl-L-alanine amidase
Products: NA
Alternate protein names: Prophage; Negative Regulator Of Beta-Lactamase Expression; Lysozyme
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MIQETFPMIIGEEEIPNERALLTQEAGPMMASSASVKYIVIHCSTTRSTRDYTAEQLLRDHKTRGFRTVGYHFYIRRDGS VTQHRKLLEVGAHCRPWNRCSIGICYEGGLDADRRPADTRTPEQTEQFILLLMRMVKIFPGVRIRGHRDMPGSIPKACPC FDAEGVFGYLEK
Sequences:
>Translated_172_residues MIQETFPMIIGEEEIPNERALLTQEAGPMMASSASVKYIVIHCSTTRSTRDYTAEQLLRDHKTRGFRTVGYHFYIRRDGS VTQHRKLLEVGAHCRPWNRCSIGICYEGGLDADRRPADTRTPEQTEQFILLLMRMVKIFPGVRIRGHRDMPGSIPKACPC FDAEGVFGYLEK >Mature_172_residues MIQETFPMIIGEEEIPNERALLTQEAGPMMASSASVKYIVIHCSTTRSTRDYTAEQLLRDHKTRGFRTVGYHFYIRRDGS VTQHRKLLEVGAHCRPWNRCSIGICYEGGLDADRRPADTRTPEQTEQFILLLMRMVKIFPGVRIRGHRDMPGSIPKACPC FDAEGVFGYLEK
Specific function: Unknown
COG id: COG3023
COG function: function code V; Negative regulator of beta-lactamase expression
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19650; Mature: 19650
Theoretical pI: Translated: 8.37; Mature: 8.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQETFPMIIGEEEIPNERALLTQEAGPMMASSASVKYIVIHCSTTRSTRDYTAEQLLRD CCCCCCCEEECCCCCCCCHHEEECCCCCCEECCCCEEEEEEEECCCCCCHHHHHHHHHHH HKTRGFRTVGYHFYIRRDGSVTQHRKLLEVGAHCRPWNRCSIGICYEGGLDADRRPADTR HHCCCEEEEEEEEEEEECCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCC TPEQTEQFILLLMRMVKIFPGVRIRGHRDMPGSIPKACPCFDAEGVFGYLEK CHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCHHCCCC >Mature Secondary Structure MIQETFPMIIGEEEIPNERALLTQEAGPMMASSASVKYIVIHCSTTRSTRDYTAEQLLRD CCCCCCCEEECCCCCCCCHHEEECCCCCCEECCCCEEEEEEEECCCCCCHHHHHHHHHHH HKTRGFRTVGYHFYIRRDGSVTQHRKLLEVGAHCRPWNRCSIGICYEGGLDADRRPADTR HHCCCEEEEEEEEEEEECCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCC TPEQTEQFILLLMRMVKIFPGVRIRGHRDMPGSIPKACPCFDAEGVFGYLEK CHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA