Definition Bacteroides vulgatus ATCC 8482 chromosome, complete genome.
Accession NC_009614
Length 5,163,189

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The map label for this gene is yicI [H]

Identifier: 150005448

GI number: 150005448

Start: 3721756

End: 3724002

Strand: Reverse

Name: yicI [H]

Synonym: BVU_2931

Alternate gene names: 150005448

Gene position: 3724002-3721756 (Counterclockwise)

Preceding gene: 150005449

Following gene: 150005447

Centisome position: 72.13

GC content: 49.71

Gene sequence:

>2247_bases
ATGAAACCAACCAATTACCACTTATTCGATTTTCTGGACTTTGATCCCGATCTGTCAAGAGACGAATCATTATGGAAAGC
ATACAAGCCCACCTCTGTCTATGAAAAAGACGGGGATATCTGTATAAACGTCCCCTTTCAAAAGCAAGTGCTCTCTAACG
ATATGGCGCCCGATACGACATCGCCCCGTGAAGAGTATACGCTGGTCATCCGTCAGTACACCTCAGGTATCACCCGGCTC
TTTATCGGATTCGGTGAAGAAAGCATGACGGATCAGTCGGAAATGCTCCAATTCAGTGACCGGGTAAAGAAACTCCCTTT
GCAAGTGACACAAACAGAAGGGGAATGGTTGATCACTACCCAAGACGGAATCCAACGGGCACTTATCCATGTAAAGCCCC
CGGTACTGGACCGTTGGAGCGAACTGCTGCCCGATCCTCAAGAGACCTTGGATCTTCGCCTTTACCCCGACGGCAAACGT
GAAATCCGACTGGCTGCCTACGACCACTTCTCCCCTCCCCGTTACGATGCGCTGCCACTGGCTTTCTGCAAACGAAACGG
AGTGAAGGAACGTGCCACCCTTTCCTTTGAATCAAAACCCGATGAATGTTTTGCCGGAACAGGGGAACGCTTTGCCAAAA
TGGACTTAAGCGGACAAACGTTCTTCTTAAAGAACCAGGACGGACAAGGTGTGAACAACCGCCGTACCTATAAGAATATT
CCTTTCTACCTCTCCAGCCGGATGTATGGAACATTCTATCACACCTGTGCCCACAGCAAACTGTCACTGGCCGGGCAATC
CACCCGCTCGGTACAGTTCCTAAGCGACCAGGCCATGCTGGATGTTTTCGTCATAGCAGGCGACACGATGGAAGAAATCC
TCCGGGGTTATCGGGATCTGACCGGATATCCTTCCATGCCTCCCCTCTGGAGTTTCGGCATCTGGATGAGCCGCATGACC
TACTTCAGCGCTGATGAAGTAAATGAGATATGCGACCGGATGCGTGCCGAACATTACCCCTGCGATGTCATCCATCTGGA
TACCGGCTGGTTCAAGACCGACTGGCTGTGCGAATGGAAATTCAACGAAGAACGCTTTCCCGATCCCAAAGGGTTCATCC
AAGGACTGAAGAAAAAAGGATATCGCGTGTCCTTATGGCAACTCCCCTACGTGGCGGAGAACGCCGAACAGATAGACGAA
GCACGCAAAAACGATTATATAGCTCCGCTGACAAAGAAACAAGATTCGGAAGGTTCCAATTTCTCCGCTTTGGACTATGC
CGGAACCATTGACTTCACTTATCCCCAAGCAACCGAATGGTATAAAGGACTGCTGAAGAATCTGCTGGATATGGGCGTGA
CCTGCATCAAAACCGATTTTGGAGAAAACATCCACATGGATGCCCTCTATAAAGGCATGAAACCCGAATTGCTGAACAAC
CTGTATGCATTGCTTTATCAGAAAGCCGCTTATGAAATCACAAAAGACGTAACCGGTGACGGCATCGTATGGGCACGCTC
GGCATGGGCGGGATGCCAACGCTATCCCCTGCATTGGGGAGGTGACTCATGCAGTTCATGGGATGGGATGGCAGGCTCGC
TGAAAGGCGGCTTGCATTTCGGGCTTTCCGGCTTCGCTTTCTGGAGTCATGATGTCCCCGGATTCCACACATTGCCCAAC
TTCATGAACTCTATAGTGGACGATGATGTATATATGCGCTGGACACAATTCGGTGTATTCTCCTCCCACATCCGTTATCA
CGGAACAAACAAACGCGAGCCGTGGCATTATCCCGCTATCGCACCTATGATAAAAAAGTGGTGGAAGTTGCGCTATACGC
TTATACCTTATATCGTAGAACAAAGCCGTAAGGCCATCGCAAGCGGAGCACCTCTCTTGCAAGCTCTGATTTTTCATCAC
CCCGAAGACAAATTGTGCTGGCACATCGACGATGAATACTATTTTGGTAACGACTTCCTAGTAGCCCCGGTCATGAACAG
CGAGAACCGCCGGGATGTCTATCTGCCCGAAGGAAAATGGGTGAATTTCTTCACAGGTGAACGCTTGGAAGGAGGACGCT
GGCTGAAGAATCTGGATGTCCCTCTGGACGAAATGCCCGTATATGTACGTCAAGGAGCGACCATCCCCGTTTATCCGGAT
GAAGTGGAATGCACGGACGATATGGATTTAAGCAAAAGCATCGGTCTACACATAGACCCTCATTTTAAAGGAATATTTAA
GAACTGA

Upstream 100 bases:

>100_bases
CCGCAAGTAGATGAAAGTATAAGACAAAAGGCAGGCAGGGTCGCTGTAGGTGGGGTGTCACAACCAAGAATCATTATAAA
AACAAAATAACAAAAAGAGA

Downstream 100 bases:

>100_bases
CGAATATGGAAACTTGGAAAACGAATTTAGACGAGACAAAGAAACGATATATAGATTGGTGGAACCATAAAGGAATCATA
CTGAACATGTGGGAGCACTT

Product: alpha-glycosidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 748; Mature: 748

Protein sequence:

>748_residues
MKPTNYHLFDFLDFDPDLSRDESLWKAYKPTSVYEKDGDICINVPFQKQVLSNDMAPDTTSPREEYTLVIRQYTSGITRL
FIGFGEESMTDQSEMLQFSDRVKKLPLQVTQTEGEWLITTQDGIQRALIHVKPPVLDRWSELLPDPQETLDLRLYPDGKR
EIRLAAYDHFSPPRYDALPLAFCKRNGVKERATLSFESKPDECFAGTGERFAKMDLSGQTFFLKNQDGQGVNNRRTYKNI
PFYLSSRMYGTFYHTCAHSKLSLAGQSTRSVQFLSDQAMLDVFVIAGDTMEEILRGYRDLTGYPSMPPLWSFGIWMSRMT
YFSADEVNEICDRMRAEHYPCDVIHLDTGWFKTDWLCEWKFNEERFPDPKGFIQGLKKKGYRVSLWQLPYVAENAEQIDE
ARKNDYIAPLTKKQDSEGSNFSALDYAGTIDFTYPQATEWYKGLLKNLLDMGVTCIKTDFGENIHMDALYKGMKPELLNN
LYALLYQKAAYEITKDVTGDGIVWARSAWAGCQRYPLHWGGDSCSSWDGMAGSLKGGLHFGLSGFAFWSHDVPGFHTLPN
FMNSIVDDDVYMRWTQFGVFSSHIRYHGTNKREPWHYPAIAPMIKKWWKLRYTLIPYIVEQSRKAIASGAPLLQALIFHH
PEDKLCWHIDDEYYFGNDFLVAPVMNSENRRDVYLPEGKWVNFFTGERLEGGRWLKNLDVPLDEMPVYVRQGATIPVYPD
EVECTDDMDLSKSIGLHIDPHFKGIFKN

Sequences:

>Translated_748_residues
MKPTNYHLFDFLDFDPDLSRDESLWKAYKPTSVYEKDGDICINVPFQKQVLSNDMAPDTTSPREEYTLVIRQYTSGITRL
FIGFGEESMTDQSEMLQFSDRVKKLPLQVTQTEGEWLITTQDGIQRALIHVKPPVLDRWSELLPDPQETLDLRLYPDGKR
EIRLAAYDHFSPPRYDALPLAFCKRNGVKERATLSFESKPDECFAGTGERFAKMDLSGQTFFLKNQDGQGVNNRRTYKNI
PFYLSSRMYGTFYHTCAHSKLSLAGQSTRSVQFLSDQAMLDVFVIAGDTMEEILRGYRDLTGYPSMPPLWSFGIWMSRMT
YFSADEVNEICDRMRAEHYPCDVIHLDTGWFKTDWLCEWKFNEERFPDPKGFIQGLKKKGYRVSLWQLPYVAENAEQIDE
ARKNDYIAPLTKKQDSEGSNFSALDYAGTIDFTYPQATEWYKGLLKNLLDMGVTCIKTDFGENIHMDALYKGMKPELLNN
LYALLYQKAAYEITKDVTGDGIVWARSAWAGCQRYPLHWGGDSCSSWDGMAGSLKGGLHFGLSGFAFWSHDVPGFHTLPN
FMNSIVDDDVYMRWTQFGVFSSHIRYHGTNKREPWHYPAIAPMIKKWWKLRYTLIPYIVEQSRKAIASGAPLLQALIFHH
PEDKLCWHIDDEYYFGNDFLVAPVMNSENRRDVYLPEGKWVNFFTGERLEGGRWLKNLDVPLDEMPVYVRQGATIPVYPD
EVECTDDMDLSKSIGLHIDPHFKGIFKN
>Mature_748_residues
MKPTNYHLFDFLDFDPDLSRDESLWKAYKPTSVYEKDGDICINVPFQKQVLSNDMAPDTTSPREEYTLVIRQYTSGITRL
FIGFGEESMTDQSEMLQFSDRVKKLPLQVTQTEGEWLITTQDGIQRALIHVKPPVLDRWSELLPDPQETLDLRLYPDGKR
EIRLAAYDHFSPPRYDALPLAFCKRNGVKERATLSFESKPDECFAGTGERFAKMDLSGQTFFLKNQDGQGVNNRRTYKNI
PFYLSSRMYGTFYHTCAHSKLSLAGQSTRSVQFLSDQAMLDVFVIAGDTMEEILRGYRDLTGYPSMPPLWSFGIWMSRMT
YFSADEVNEICDRMRAEHYPCDVIHLDTGWFKTDWLCEWKFNEERFPDPKGFIQGLKKKGYRVSLWQLPYVAENAEQIDE
ARKNDYIAPLTKKQDSEGSNFSALDYAGTIDFTYPQATEWYKGLLKNLLDMGVTCIKTDFGENIHMDALYKGMKPELLNN
LYALLYQKAAYEITKDVTGDGIVWARSAWAGCQRYPLHWGGDSCSSWDGMAGSLKGGLHFGLSGFAFWSHDVPGFHTLPN
FMNSIVDDDVYMRWTQFGVFSSHIRYHGTNKREPWHYPAIAPMIKKWWKLRYTLIPYIVEQSRKAIASGAPLLQALIFHH
PEDKLCWHIDDEYYFGNDFLVAPVMNSENRRDVYLPEGKWVNFFTGERLEGGRWLKNLDVPLDEMPVYVRQGATIPVYPD
EVECTDDMDLSKSIGLHIDPHFKGIFKN

Specific function: Can catalyzes the transfer of alpha-xylosyl residue from alpha-xyloside to xylose, glucose, mannose, fructose, maltose, isomaltose, nigerose, kojibiose, sucrose and trehalose [H]

COG id: COG1501

COG function: function code G; Alpha-glucosidases, family 31 of glycosyl hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 31 family [H]

Homologues:

Organism=Homo sapiens, GI88900491, Length=501, Percent_Identity=27.9441117764471, Blast_Score=167, Evalue=3e-41,
Organism=Homo sapiens, GI38202257, Length=524, Percent_Identity=27.4809160305344, Blast_Score=167, Evalue=3e-41,
Organism=Homo sapiens, GI66346737, Length=588, Percent_Identity=26.3605442176871, Blast_Score=162, Evalue=8e-40,
Organism=Homo sapiens, GI119393895, Length=600, Percent_Identity=24.8333333333333, Blast_Score=149, Evalue=8e-36,
Organism=Homo sapiens, GI119393893, Length=600, Percent_Identity=24.8333333333333, Blast_Score=149, Evalue=8e-36,
Organism=Homo sapiens, GI119393891, Length=600, Percent_Identity=24.8333333333333, Blast_Score=149, Evalue=8e-36,
Organism=Homo sapiens, GI221316699, Length=557, Percent_Identity=22.262118491921, Blast_Score=146, Evalue=9e-35,
Organism=Homo sapiens, GI157364974, Length=585, Percent_Identity=23.0769230769231, Blast_Score=133, Evalue=8e-31,
Organism=Homo sapiens, GI310115361, Length=247, Percent_Identity=31.1740890688259, Blast_Score=126, Evalue=1e-28,
Organism=Homo sapiens, GI153791946, Length=384, Percent_Identity=23.9583333333333, Blast_Score=109, Evalue=1e-23,
Organism=Escherichia coli, GI2367256, Length=542, Percent_Identity=35.7933579335793, Blast_Score=346, Evalue=3e-96,
Organism=Escherichia coli, GI2367323, Length=614, Percent_Identity=25.4071661237785, Blast_Score=170, Evalue=3e-43,
Organism=Caenorhabditis elegans, GI71991189, Length=504, Percent_Identity=26.984126984127, Blast_Score=155, Evalue=1e-37,
Organism=Caenorhabditis elegans, GI17560800, Length=479, Percent_Identity=24.8434237995825, Blast_Score=137, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI17560798, Length=479, Percent_Identity=24.8434237995825, Blast_Score=137, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI71985706, Length=246, Percent_Identity=26.8292682926829, Blast_Score=105, Evalue=7e-23,
Organism=Caenorhabditis elegans, GI32563849, Length=260, Percent_Identity=28.8461538461538, Blast_Score=104, Evalue=2e-22,
Organism=Saccharomyces cerevisiae, GI6319706, Length=589, Percent_Identity=23.7691001697793, Blast_Score=147, Evalue=6e-36,
Organism=Drosophila melanogaster, GI24650054, Length=433, Percent_Identity=28.175519630485, Blast_Score=137, Evalue=3e-32,
Organism=Drosophila melanogaster, GI24643749, Length=485, Percent_Identity=23.0927835051546, Blast_Score=118, Evalue=1e-26,
Organism=Drosophila melanogaster, GI24643753, Length=485, Percent_Identity=23.0927835051546, Blast_Score=118, Evalue=1e-26,
Organism=Drosophila melanogaster, GI24643751, Length=485, Percent_Identity=23.0927835051546, Blast_Score=118, Evalue=1e-26,
Organism=Drosophila melanogaster, GI24643746, Length=485, Percent_Identity=23.0927835051546, Blast_Score=118, Evalue=1e-26,
Organism=Drosophila melanogaster, GI21357605, Length=485, Percent_Identity=23.0927835051546, Blast_Score=118, Evalue=1e-26,
Organism=Drosophila melanogaster, GI28571438, Length=387, Percent_Identity=22.7390180878553, Blast_Score=101, Evalue=2e-21,
Organism=Drosophila melanogaster, GI28571440, Length=384, Percent_Identity=22.3958333333333, Blast_Score=100, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR011013
- InterPro:   IPR000322
- InterPro:   IPR017853 [H]

Pfam domain/function: PF01055 Glyco_hydro_31 [H]

EC number: NA

Molecular weight: Translated: 86398; Mature: 86398

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPTNYHLFDFLDFDPDLSRDESLWKAYKPTSVYEKDGDICINVPFQKQVLSNDMAPDTT
CCCCCEEEEEEECCCCCCCCCHHHHHHCCCCCCEECCCCEEEECCHHHHHHCCCCCCCCC
SPREEYTLVIRQYTSGITRLFIGFGEESMTDQSEMLQFSDRVKKLPLQVTQTEGEWLITT
CCHHHHEEHHHHHHCCCEEEEEECCCHHCCCHHHHHHHHHHHHHCCEEEEECCCCEEEEE
QDGIQRALIHVKPPVLDRWSELLPDPQETLDLRLYPDGKREIRLAAYDHFSPPRYDALPL
HHHHHHHHHCCCCCHHHHHHHHCCCCHHHEEEEECCCCCCEEEEEEECCCCCCCCCCCHH
AFCKRNGVKERATLSFESKPDECFAGTGERFAKMDLSGQTFFLKNQDGQGVNNRRTYKNI
HHHHCCCCCCCEEEEECCCCCHHHCCCCCHHEEECCCCCEEEEECCCCCCCCCCCCCCCC
PFYLSSRMYGTFYHTCAHSKLSLAGQSTRSVQFLSDQAMLDVFVIAGDTMEEILRGYRDL
CEEEECCCCHHHHHHHCCCHHEECCCCCCCEEECCCCCEEEEEEECCCHHHHHHHHHHHC
TGYPSMPPLWSFGIWMSRMTYFSADEVNEICDRMRAEHYPCDVIHLDTGWFKTDWLCEWK
CCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEECCCCEECCEEEEEE
FNEERFPDPKGFIQGLKKKGYRVSLWQLPYVAENAEQIDEARKNDYIAPLTKKQDSEGSN
CCCCCCCCHHHHHHHHHHCCCEEEEEECCCHHCCHHHHHHHHHCCCCCCCCCCCCCCCCC
FSALDYAGTIDFTYPQATEWYKGLLKNLLDMGVTCIKTDFGENIHMDALYKGMKPELLNN
EEEEEECCEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHCCCCHHHHHH
LYALLYQKAAYEITKDVTGDGIVWARSAWAGCQRYPLHWGGDSCSSWDGMAGSLKGGLHF
HHHHHHHHHHHHHHHCCCCCCEEEECCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
GLSGFAFWSHDVPGFHTLPNFMNSIVDDDVYMRWTQFGVFSSHIRYHGTNKREPWHYPAI
CCCEEEEECCCCCCHHHHHHHHHHHHCCCHHEEHHHHHHHHHHEEECCCCCCCCCCCCHH
APMIKKWWKLRYTLIPYIVEQSRKAIASGAPLLQALIFHHPEDKLCWHIDDEYYFGNDFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEECCCEEECCCEE
VAPVMNSENRRDVYLPEGKWVNFFTGERLEGGRWLKNLDVPLDEMPVYVRQGATIPVYPD
EEEECCCCCCCEEECCCCCEEEEECCCCCCCCCHHHCCCCCHHHCCCHHHCCCEECCCCC
EVECTDDMDLSKSIGLHIDPHFKGIFKN
CCCCCCCCCCHHCCCCEECCCCCCCCCC
>Mature Secondary Structure
MKPTNYHLFDFLDFDPDLSRDESLWKAYKPTSVYEKDGDICINVPFQKQVLSNDMAPDTT
CCCCCEEEEEEECCCCCCCCCHHHHHHCCCCCCEECCCCEEEECCHHHHHHCCCCCCCCC
SPREEYTLVIRQYTSGITRLFIGFGEESMTDQSEMLQFSDRVKKLPLQVTQTEGEWLITT
CCHHHHEEHHHHHHCCCEEEEEECCCHHCCCHHHHHHHHHHHHHCCEEEEECCCCEEEEE
QDGIQRALIHVKPPVLDRWSELLPDPQETLDLRLYPDGKREIRLAAYDHFSPPRYDALPL
HHHHHHHHHCCCCCHHHHHHHHCCCCHHHEEEEECCCCCCEEEEEEECCCCCCCCCCCHH
AFCKRNGVKERATLSFESKPDECFAGTGERFAKMDLSGQTFFLKNQDGQGVNNRRTYKNI
HHHHCCCCCCCEEEEECCCCCHHHCCCCCHHEEECCCCCEEEEECCCCCCCCCCCCCCCC
PFYLSSRMYGTFYHTCAHSKLSLAGQSTRSVQFLSDQAMLDVFVIAGDTMEEILRGYRDL
CEEEECCCCHHHHHHHCCCHHEECCCCCCCEEECCCCCEEEEEEECCCHHHHHHHHHHHC
TGYPSMPPLWSFGIWMSRMTYFSADEVNEICDRMRAEHYPCDVIHLDTGWFKTDWLCEWK
CCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEECCCCEECCEEEEEE
FNEERFPDPKGFIQGLKKKGYRVSLWQLPYVAENAEQIDEARKNDYIAPLTKKQDSEGSN
CCCCCCCCHHHHHHHHHHCCCEEEEEECCCHHCCHHHHHHHHHCCCCCCCCCCCCCCCCC
FSALDYAGTIDFTYPQATEWYKGLLKNLLDMGVTCIKTDFGENIHMDALYKGMKPELLNN
EEEEEECCEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHCCCCHHHHHH
LYALLYQKAAYEITKDVTGDGIVWARSAWAGCQRYPLHWGGDSCSSWDGMAGSLKGGLHF
HHHHHHHHHHHHHHHCCCCCCEEEECCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
GLSGFAFWSHDVPGFHTLPNFMNSIVDDDVYMRWTQFGVFSSHIRYHGTNKREPWHYPAI
CCCEEEEECCCCCCHHHHHHHHHHHHCCCHHEEHHHHHHHHHHEEECCCCCCCCCCCCHH
APMIKKWWKLRYTLIPYIVEQSRKAIASGAPLLQALIFHHPEDKLCWHIDDEYYFGNDFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEECCCEEECCCEE
VAPVMNSENRRDVYLPEGKWVNFFTGERLEGGRWLKNLDVPLDEMPVYVRQGATIPVYPD
EEEECCCCCCCEEECCCCCEEEEECCCCCCCCCHHHCCCCCHHHCCCHHHCCCEECCCCC
EVECTDDMDLSKSIGLHIDPHFKGIFKN
CCCCCCCCCCHHCCCCEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]