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The map label for this gene is 150005410

Identifier: 150005410

GI number: 150005410

Start: 3659631

End: 3660407

Strand: Reverse

Name: 150005410

Synonym: BVU_2893

Alternate gene names: NA

Gene position: 3660407-3659631 (Counterclockwise)

Preceding gene: 150005411

Following gene: 150005409

Centisome position: 70.89

GC content: 44.02

Gene sequence:

>777_bases
ATGAAATTGAACTTGAAGAATCCTATTGTTTTTTTCGATTTGGAAACAACGGGAACAAATATAAACACAGACAGAATAGT
GGAAATATGCTATCTGAAGGTGTACCCAAACGGCAACGAAGAAACGAAGACCATGCGTATCAATCCGGAAATGCATATTC
CCGAACAATCTTCTGCCATCCACGGTATTTATGACGCAGATGTGGCGGACTGCCCTACTTTCAAGGAAGTGGCAAAAGAG
ATAGCCCGGGACATTGAGGGATGTGACCTTGCCGGTTTCAATTCCAATCGTTTCGACATTCCGGTTCTGGCCGAGGAGTT
CCTGCGCGCAGGAGTAGACATTGACATGATGAAACGAAAATTCATTGACGTGCAGGTGATTTATCACAAACTGGAACAGC
GCACCCTGTCTGCCGCCTATAAATTCTATTGCGGAAAGAATCTGGAAGATGCCCATACAGCCGAAGCCGACACACGTGCC
ACATACGAAGTACTGAAATCCCAATTGGACCGCTATCCGGAAGAATTGCAAAACGATATGGCATTTCTAGCCGAATATTC
AAGTTTCAACAAGAACGTAGATTTCGCCGGACGCATTGTTTATGATGACAAAGGCGTGGAAGTCTTTAATTTTGGGAAAT
ACAAAGGAATGTCGGTCAGCGAAGTATTACAAAAAGATCCGGGCTACTACAGCTGGATACTGAACGGTGACTTTACGCTG
AACACGAAAAACGTACTGACAAAAATCAGACTACGTGAATCGGGAATGATGAAATGA

Upstream 100 bases:

>100_bases
AAAAGAAGACCTGCTGATGCTGCTGATGCCTATGATGCTGAACGACTAAAAACAACACGCCACCATGTGGCGGAAAAACA
ATATATAATACAAGCTGAAA

Downstream 100 bases:

>100_bases
GTATGAAAGGAAAAAAAATCGTACTAGGTATAACCGGAAGTATAGCCGCCTATAAAGCGGCTATACTCATTCGCGGACTT
ATTAAGAAGGGAGCGGAAGT

Product: DNA Pol III epsilon chain

Products: diphosphate; DNAn+1

Alternate protein names: Exonuclease RNAse T And DNA Polymerase III; DNA Polymerase III Epsilon Subunit; Exonuclease; DNA Polymerase III Epsilon Chain; DNA Pol III Epsilon Chain; DNA Polymerase Subunit III Epsilon; DNA Polymerase III PolC-Type; DNAQ Family Exonuclease/DinG Family Helicase; DNA Polymerase III Subunit Epsilon-Like 3-5' Exonuclease; DNA Polymerase III Epsilon Subunit + GIY-YIG Endonuclease; DNA Polymerase III Epsilon Subunit-Like 3-5' Exonuclease

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MKLNLKNPIVFFDLETTGTNINTDRIVEICYLKVYPNGNEETKTMRINPEMHIPEQSSAIHGIYDADVADCPTFKEVAKE
IARDIEGCDLAGFNSNRFDIPVLAEEFLRAGVDIDMMKRKFIDVQVIYHKLEQRTLSAAYKFYCGKNLEDAHTAEADTRA
TYEVLKSQLDRYPEELQNDMAFLAEYSSFNKNVDFAGRIVYDDKGVEVFNFGKYKGMSVSEVLQKDPGYYSWILNGDFTL
NTKNVLTKIRLRESGMMK

Sequences:

>Translated_258_residues
MKLNLKNPIVFFDLETTGTNINTDRIVEICYLKVYPNGNEETKTMRINPEMHIPEQSSAIHGIYDADVADCPTFKEVAKE
IARDIEGCDLAGFNSNRFDIPVLAEEFLRAGVDIDMMKRKFIDVQVIYHKLEQRTLSAAYKFYCGKNLEDAHTAEADTRA
TYEVLKSQLDRYPEELQNDMAFLAEYSSFNKNVDFAGRIVYDDKGVEVFNFGKYKGMSVSEVLQKDPGYYSWILNGDFTL
NTKNVLTKIRLRESGMMK
>Mature_258_residues
MKLNLKNPIVFFDLETTGTNINTDRIVEICYLKVYPNGNEETKTMRINPEMHIPEQSSAIHGIYDADVADCPTFKEVAKE
IARDIEGCDLAGFNSNRFDIPVLAEEFLRAGVDIDMMKRKFIDVQVIYHKLEQRTLSAAYKFYCGKNLEDAHTAEADTRA
TYEVLKSQLDRYPEELQNDMAFLAEYSSFNKNVDFAGRIVYDDKGVEVFNFGKYKGMSVSEVLQKDPGYYSWILNGDFTL
NTKNVLTKIRLRESGMMK

Specific function: Unknown

COG id: COG0847

COG function: function code L; DNA polymerase III, epsilon subunit and related 3'-5' exonucleases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 29604; Mature: 29604

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLNLKNPIVFFDLETTGTNINTDRIVEICYLKVYPNGNEETKTMRINPEMHIPEQSSAI
CCCCCCCCEEEEEEECCCCCCCHHHEEEEEEEEEECCCCCCCEEEEECCCEECCCCCCCC
HGIYDADVADCPTFKEVAKEIARDIEGCDLAGFNSNRFDIPVLAEEFLRAGVDIDMMKRK
CCEECCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHH
FIDVQVIYHKLEQRTLSAAYKFYCGKNLEDAHTAEADTRATYEVLKSQLDRYPEELQNDM
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHH
AFLAEYSSFNKNVDFAGRIVYDDKGVEVFNFGKYKGMSVSEVLQKDPGYYSWILNGDFTL
HHHHHHHHCCCCCCEEEEEEECCCCCEEEECCCCCCCCHHHHHHCCCCEEEEEECCCEEE
NTKNVLTKIRLRESGMMK
CHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKLNLKNPIVFFDLETTGTNINTDRIVEICYLKVYPNGNEETKTMRINPEMHIPEQSSAI
CCCCCCCCEEEEEEECCCCCCCHHHEEEEEEEEEECCCCCCCEEEEECCCEECCCCCCCC
HGIYDADVADCPTFKEVAKEIARDIEGCDLAGFNSNRFDIPVLAEEFLRAGVDIDMMKRK
CCEECCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHCCCCHHHHHHH
FIDVQVIYHKLEQRTLSAAYKFYCGKNLEDAHTAEADTRATYEVLKSQLDRYPEELQNDM
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHCHHHHHHHH
AFLAEYSSFNKNVDFAGRIVYDDKGVEVFNFGKYKGMSVSEVLQKDPGYYSWILNGDFTL
HHHHHHHHCCCCCCEEEEEEECCCCCEEEECCCCCCCCHHHHHHCCCCEEEEEECCCEEE
NTKNVLTKIRLRESGMMK
CHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA