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The map label for this gene is recN [H]

Identifier: 150005408

GI number: 150005408

Start: 3656645

End: 3658306

Strand: Reverse

Name: recN [H]

Synonym: BVU_2891

Alternate gene names: 150005408

Gene position: 3658306-3656645 (Counterclockwise)

Preceding gene: 150005409

Following gene: 150005407

Centisome position: 70.85

GC content: 46.81

Gene sequence:

>1662_bases
ATGCTGCAATCTATCTATATACAGAATTATGCATTGATTGATACATTGGATATCAGTTTCACCCCCGGCTTCTCTGTCAT
CACCGGAGAGACCGGTGCCGGTAAATCGATTATTCTAGGCGCTATCGGCTTGTTACTGGGACAACGGGCCGATATCAAAG
CGATCAAGAAAGGCGCCAATAAATGTATTGTAGAAGCACGTTTCAACATCTCCGCCTATCAGATGGAGCCTTTCTTTACC
CAAAGAGATTTGGAATATGATCCGGATGAATGTATTATCCGCCGCGAGTTATATGCATCAGGTAAAAGCCGCGCATTCAT
AAACGATACTCCGGCCTCATTGGCGCAGATGAAGGAACTGGGCGAGAAACTGATAGATGTACATAGCCAGCATCAAAACC
TGTTGCTCAACAGTGAGGGATTCCAATTGAATGTATTGGATATCCTGGCACAGGATGACAACGAACTTTCAGCATACAAG
GATATTTATACCGAGTACAGGAACGTATGCAAACAGCTGGCCGACTTCATAACGCAAGCCGAGCAAAGCCGGAAGGATGA
AGATTACATCCGGTTCCAACTGGAACAGCTGGATGATGCAAACCTTCAGGAAGGAGAACAAACCGAACTGGAACAGGAAG
CCGAAACCTTGAATCATGCCGAAGAGATAAAAGCGGGCTTGTACAAAGTGGACCAAATAATGGCTTCGGAAGATGCCAGC
CTGTTGTCCGCTACCAAAGAATGTATGCAAACCCTGCATAACATAGCGAGAGTGTACACACGTGCCCAGGAATGGATAGG
GCGTTTAGACAGTTGTTACATAGAACTGAAAGATCTGTCGCATGAAATAGCAGGCGCACAGGAGGAAGTGGAGTTCAACC
CCACCCGTCTGGATTATGTAAATGAACGCCTGAACTTAATCTACTCTTTGCAACAGAAGCATCACGTACAAACAATAGAG
GAATTGATAGCCGTGCAAACCGACTATCATGAGAAGCTGAACGCCATCACTTCTTTTGATGACCGTATAGCAGAACTTAC
CGCCCAAAAAGAAACGCTATATGACAAAGTGATAAAGCAAGCTGCTGTGTTGACAAAACTCCGTTCCCAATCGGGCAAGC
ACATTGAAAGACAGATGCAAAGCCTGCTGGTTCCTCTCGGTATGCCCAATGTGCGCTTTGTGGTGGAACTGAATCCGCGC
AAGGAACCGGACAGTAAAGGGATGGACAGTGTGACATTCCTGTTTTCGGCCAACAAGAATGGAACATTACAAAATGTAGC
TTCCGTAGCATCGGGTGGTGAGATTGCCCGTGTCATGCTTTCGCTGAAAGCCATGATAGCCGGAGCTGTGAAACTGCCTA
CTATCATCTTTGATGAAATAGACACCGGAGTTTCCGGTTCCATCGCCGAGAAAATGGCGCTCATCATGCAGGAGATGGGA
AAACAAAACCGTCAGGTCATCAGCATCACCCACCTGCCCCAGATTGCAGCACGCGGCATCACTCATTATAAAGTATATAA
GGAAGATACGGAAACAGGCACCAACAGCCACATCCGCCGCCTGACTGATGAAGAAAGAGTAAAAGAAATTGCCAATATGC
TAAGTGGGGCTACCTTGACAGAGGCAGCCCTGAACAATGCAAAGGCGCTGATAAGTGGCTAG

Upstream 100 bases:

>100_bases
ATGTGCTAATGTGCTAATGTGCTAATTACCATGCGGAATACAACAGCGCAGCAAATTAGCAAATTGACAAATCAGCAAAT
TATTAAAAAGGAGCAAGAAT

Downstream 100 bases:

>100_bases
TGCCAATTACCACTAACCACCTGTCACTAACCATTAACCACTTATTAAATATGTTAGAAAAGAATGAAATGATTTTCGGT
GTACGCGCTGTTATTGAAGC

Product: DNA repair protein recN

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 553; Mature: 553

Protein sequence:

>553_residues
MLQSIYIQNYALIDTLDISFTPGFSVITGETGAGKSIILGAIGLLLGQRADIKAIKKGANKCIVEARFNISAYQMEPFFT
QRDLEYDPDECIIRRELYASGKSRAFINDTPASLAQMKELGEKLIDVHSQHQNLLLNSEGFQLNVLDILAQDDNELSAYK
DIYTEYRNVCKQLADFITQAEQSRKDEDYIRFQLEQLDDANLQEGEQTELEQEAETLNHAEEIKAGLYKVDQIMASEDAS
LLSATKECMQTLHNIARVYTRAQEWIGRLDSCYIELKDLSHEIAGAQEEVEFNPTRLDYVNERLNLIYSLQQKHHVQTIE
ELIAVQTDYHEKLNAITSFDDRIAELTAQKETLYDKVIKQAAVLTKLRSQSGKHIERQMQSLLVPLGMPNVRFVVELNPR
KEPDSKGMDSVTFLFSANKNGTLQNVASVASGGEIARVMLSLKAMIAGAVKLPTIIFDEIDTGVSGSIAEKMALIMQEMG
KQNRQVISITHLPQIAARGITHYKVYKEDTETGTNSHIRRLTDEERVKEIANMLSGATLTEAALNNAKALISG

Sequences:

>Translated_553_residues
MLQSIYIQNYALIDTLDISFTPGFSVITGETGAGKSIILGAIGLLLGQRADIKAIKKGANKCIVEARFNISAYQMEPFFT
QRDLEYDPDECIIRRELYASGKSRAFINDTPASLAQMKELGEKLIDVHSQHQNLLLNSEGFQLNVLDILAQDDNELSAYK
DIYTEYRNVCKQLADFITQAEQSRKDEDYIRFQLEQLDDANLQEGEQTELEQEAETLNHAEEIKAGLYKVDQIMASEDAS
LLSATKECMQTLHNIARVYTRAQEWIGRLDSCYIELKDLSHEIAGAQEEVEFNPTRLDYVNERLNLIYSLQQKHHVQTIE
ELIAVQTDYHEKLNAITSFDDRIAELTAQKETLYDKVIKQAAVLTKLRSQSGKHIERQMQSLLVPLGMPNVRFVVELNPR
KEPDSKGMDSVTFLFSANKNGTLQNVASVASGGEIARVMLSLKAMIAGAVKLPTIIFDEIDTGVSGSIAEKMALIMQEMG
KQNRQVISITHLPQIAARGITHYKVYKEDTETGTNSHIRRLTDEERVKEIANMLSGATLTEAALNNAKALISG
>Mature_553_residues
MLQSIYIQNYALIDTLDISFTPGFSVITGETGAGKSIILGAIGLLLGQRADIKAIKKGANKCIVEARFNISAYQMEPFFT
QRDLEYDPDECIIRRELYASGKSRAFINDTPASLAQMKELGEKLIDVHSQHQNLLLNSEGFQLNVLDILAQDDNELSAYK
DIYTEYRNVCKQLADFITQAEQSRKDEDYIRFQLEQLDDANLQEGEQTELEQEAETLNHAEEIKAGLYKVDQIMASEDAS
LLSATKECMQTLHNIARVYTRAQEWIGRLDSCYIELKDLSHEIAGAQEEVEFNPTRLDYVNERLNLIYSLQQKHHVQTIE
ELIAVQTDYHEKLNAITSFDDRIAELTAQKETLYDKVIKQAAVLTKLRSQSGKHIERQMQSLLVPLGMPNVRFVVELNPR
KEPDSKGMDSVTFLFSANKNGTLQNVASVASGGEIARVMLSLKAMIAGAVKLPTIIFDEIDTGVSGSIAEKMALIMQEMG
KQNRQVISITHLPQIAARGITHYKVYKEDTETGTNSHIRRLTDEERVKEIANMLSGATLTEAALNNAKALISG

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=562, Percent_Identity=30.0711743772242, Blast_Score=263, Evalue=2e-71,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 62003; Mature: 62003

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQSIYIQNYALIDTLDISFTPGFSVITGETGAGKSIILGAIGLLLGQRADIKAIKKGAN
CCCEEEECCEEEEEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCC
KCIVEARFNISAYQMEPFFTQRDLEYDPDECIIRRELYASGKSRAFINDTPASLAQMKEL
CEEEEEEECCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHH
GEKLIDVHSQHQNLLLNSEGFQLNVLDILAQDDNELSAYKDIYTEYRNVCKQLADFITQA
HHHHHHHHHHHCCEEECCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EQSRKDEDYIRFQLEQLDDANLQEGEQTELEQEAETLNHAEEIKAGLYKVDQIMASEDAS
HHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
LLSATKECMQTLHNIARVYTRAQEWIGRLDSCYIELKDLSHEIAGAQEEVEFNPTRLDYV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEHHHHHHHHHCCCCCCCCCCCHHHHHH
NERLNLIYSLQQKHHVQTIEELIAVQTDYHEKLNAITSFDDRIAELTAQKETLYDKVIKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAVLTKLRSQSGKHIERQMQSLLVPLGMPNVRFVVELNPRKEPDSKGMDSVTFLFSANKN
HHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCC
GTLQNVASVASGGEIARVMLSLKAMIAGAVKLPTIIFDEIDTGVSGSIAEKMALIMQEMG
CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHC
KQNRQVISITHLPQIAARGITHYKVYKEDTETGTNSHIRRLTDEERVKEIANMLSGATLT
CCCCEEEEEECCHHHHHCCCCEEEEECCCCCCCCHHHHHHCCHHHHHHHHHHHHCCCHHH
EAALNNAKALISG
HHHHCCCHHHCCC
>Mature Secondary Structure
MLQSIYIQNYALIDTLDISFTPGFSVITGETGAGKSIILGAIGLLLGQRADIKAIKKGAN
CCCEEEECCEEEEEEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCC
KCIVEARFNISAYQMEPFFTQRDLEYDPDECIIRRELYASGKSRAFINDTPASLAQMKEL
CEEEEEEECCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHH
GEKLIDVHSQHQNLLLNSEGFQLNVLDILAQDDNELSAYKDIYTEYRNVCKQLADFITQA
HHHHHHHHHHHCCEEECCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EQSRKDEDYIRFQLEQLDDANLQEGEQTELEQEAETLNHAEEIKAGLYKVDQIMASEDAS
HHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
LLSATKECMQTLHNIARVYTRAQEWIGRLDSCYIELKDLSHEIAGAQEEVEFNPTRLDYV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEHHHHHHHHHCCCCCCCCCCCHHHHHH
NERLNLIYSLQQKHHVQTIEELIAVQTDYHEKLNAITSFDDRIAELTAQKETLYDKVIKQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAVLTKLRSQSGKHIERQMQSLLVPLGMPNVRFVVELNPRKEPDSKGMDSVTFLFSANKN
HHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCC
GTLQNVASVASGGEIARVMLSLKAMIAGAVKLPTIIFDEIDTGVSGSIAEKMALIMQEMG
CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHC
KQNRQVISITHLPQIAARGITHYKVYKEDTETGTNSHIRRLTDEERVKEIANMLSGATLT
CCCCEEEEEECCHHHHHCCCCEEEEECCCCCCCCHHHHHHCCHHHHHHHHHHHHCCCHHH
EAALNNAKALISG
HHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA