Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
---|---|
Accession | NC_009614 |
Length | 5,163,189 |
Click here to switch to the map view.
The map label for this gene is 150005209
Identifier: 150005209
GI number: 150005209
Start: 3401390
End: 3402928
Strand: Reverse
Name: 150005209
Synonym: BVU_2679
Alternate gene names: NA
Gene position: 3402928-3401390 (Counterclockwise)
Preceding gene: 150005210
Following gene: 150005208
Centisome position: 65.91
GC content: 48.6
Gene sequence:
>1539_bases ATGAACAAAAAATTATTATTATCCTTCGCTCTTGCAGCTGCAATGACAGGATGTATCAATGATGCAGATGTTCCCTCAGG AAACGGAGACAATCCGGCTACCGGAGCCAGAGGAGGAAACATGGAGATTTCATTTCTAGTTCCCAACTCTTCCAACGGCA GCCGTGCCGCTTCCGCCGAAGACTCCGGAGTTTACGAAGACGGAACCGCCGAAGAATACAAGGTGAGCAATGTAACCCTC TATCTGTTTGACTCTTCCAGCAAGAATCTGGTTACTACCATCAATGTAACTCAAAGCGATCTGGGTGCAGGCACTTCCAG CGGAGAGAGCAGCAAAGAAGGACAAACCATTGTTTATCCTTGCAACAAGGAAATCACAGTAAAACCGGGCAACTATGACA TCCTTGCCGTAGCCAACGGTTCACAGACCTTCGAAATAGGTCAGGAATCCACATTATTGGGACAGATTGATGCCTCCACC TATGGAAACGGCATGATAACCAGCGTACCCGGAAGCGGTTTCATCATGTCCAACCGCGGCTCTGCCAATATGAACATCAC CGTGGAGTCTCCCGAAGAAAGCGACACCAAAACACAGGTCAGAATCAATCTGGAACGTGCCGTTGCCAAACTGATGGTCA GAAATGACAGCAAGGAAATCTACACGCTGAAGAACCCTGCCGGAGTGACTTACGCCACAGTCCGTCTGAACAACTACAAA TTCATCAACCTGGCAAACAAGTTCTACACCTTCCGCCATGTCGCTACACTGGATAACGCTCCTGAGACTCCGTCAGCTCC GTCGTCTTACAGCGTGGAAGCAGGAAACTTCGGTAACATCGCCGACAACAACGGTTACCTTATCGACCCCTATTTCTTCG ACAAGACCGTAGCAGGAGCCACTACCAATTTCACAGGCGGTTCATTCTACACCAACCACCTGTCAAAACAGACAGACAGC AACTGGTCGGGCCTGGCCGATGCAGGAAAGTACGTTTCCATGTACTGTCTTGAAAACTGTATGTTCCGTCCGGCACAGAA CACGGTGTACACCACCGGTATCATGCTGAAAGGTACATTTACCCCCGAAGCTTCACAGACCATCGGTAACAACGGTAATC CGGTAGAAGACCCGCTTGTATTCAACACACTGTATTATTTCAACTATAAGTTCTACACCACACTGGCAGCTGTAGGCAAA TATGGCGATGCCAATATTGATGGTTTGACAGAAGAATCCAGTGATGCAGAACTGGCAGCCAAGCAGATTACCCGTTTCAC CAAGAACGGAGGCAATTTCTCCACTTTCTACAACTACTGGATCAAACATCTTGACAACAACAACCCCACCGTCATGGGCG TCATGGAGTTCGGTATTGTACGTAACAACATCTACTCTGTCAACATCACCAGCATCAAGAACCTGGGTCCCGGCACCCCA GACACCAAACCCGATCCGGATGAAAACAAAGCATTCCTGGACGTAGAATTCGGAGTATATCCGTGGATTGTCCGTGACCA AGATGCCGACCTTGAATAA
Upstream 100 bases:
>100_bases GCGCAAAGCGGAAGAAGCAGGACTGCCCCAAGCAGGTGAAAACCTGAAGATATTACATGAGATTTACTAATCACATTTTT AACTAAAACATTTTTACATT
Downstream 100 bases:
>100_bases AACAGTCTCAAAATAGAAAAACAATGAGTAAAACTGCTACTATCCTCTTCGCCCTATGTACTCTTTTCTGTAGTGCATGT TCCTGGGTAGACGATGACCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 512; Mature: 512
Protein sequence:
>512_residues MNKKLLLSFALAAAMTGCINDADVPSGNGDNPATGARGGNMEISFLVPNSSNGSRAASAEDSGVYEDGTAEEYKVSNVTL YLFDSSSKNLVTTINVTQSDLGAGTSSGESSKEGQTIVYPCNKEITVKPGNYDILAVANGSQTFEIGQESTLLGQIDAST YGNGMITSVPGSGFIMSNRGSANMNITVESPEESDTKTQVRINLERAVAKLMVRNDSKEIYTLKNPAGVTYATVRLNNYK FINLANKFYTFRHVATLDNAPETPSAPSSYSVEAGNFGNIADNNGYLIDPYFFDKTVAGATTNFTGGSFYTNHLSKQTDS NWSGLADAGKYVSMYCLENCMFRPAQNTVYTTGIMLKGTFTPEASQTIGNNGNPVEDPLVFNTLYYFNYKFYTTLAAVGK YGDANIDGLTEESSDAELAAKQITRFTKNGGNFSTFYNYWIKHLDNNNPTVMGVMEFGIVRNNIYSVNITSIKNLGPGTP DTKPDPDENKAFLDVEFGVYPWIVRDQDADLE
Sequences:
>Translated_512_residues MNKKLLLSFALAAAMTGCINDADVPSGNGDNPATGARGGNMEISFLVPNSSNGSRAASAEDSGVYEDGTAEEYKVSNVTL YLFDSSSKNLVTTINVTQSDLGAGTSSGESSKEGQTIVYPCNKEITVKPGNYDILAVANGSQTFEIGQESTLLGQIDAST YGNGMITSVPGSGFIMSNRGSANMNITVESPEESDTKTQVRINLERAVAKLMVRNDSKEIYTLKNPAGVTYATVRLNNYK FINLANKFYTFRHVATLDNAPETPSAPSSYSVEAGNFGNIADNNGYLIDPYFFDKTVAGATTNFTGGSFYTNHLSKQTDS NWSGLADAGKYVSMYCLENCMFRPAQNTVYTTGIMLKGTFTPEASQTIGNNGNPVEDPLVFNTLYYFNYKFYTTLAAVGK YGDANIDGLTEESSDAELAAKQITRFTKNGGNFSTFYNYWIKHLDNNNPTVMGVMEFGIVRNNIYSVNITSIKNLGPGTP DTKPDPDENKAFLDVEFGVYPWIVRDQDADLE >Mature_512_residues MNKKLLLSFALAAAMTGCINDADVPSGNGDNPATGARGGNMEISFLVPNSSNGSRAASAEDSGVYEDGTAEEYKVSNVTL YLFDSSSKNLVTTINVTQSDLGAGTSSGESSKEGQTIVYPCNKEITVKPGNYDILAVANGSQTFEIGQESTLLGQIDAST YGNGMITSVPGSGFIMSNRGSANMNITVESPEESDTKTQVRINLERAVAKLMVRNDSKEIYTLKNPAGVTYATVRLNNYK FINLANKFYTFRHVATLDNAPETPSAPSSYSVEAGNFGNIADNNGYLIDPYFFDKTVAGATTNFTGGSFYTNHLSKQTDS NWSGLADAGKYVSMYCLENCMFRPAQNTVYTTGIMLKGTFTPEASQTIGNNGNPVEDPLVFNTLYYFNYKFYTTLAAVGK YGDANIDGLTEESSDAELAAKQITRFTKNGGNFSTFYNYWIKHLDNNNPTVMGVMEFGIVRNNIYSVNITSIKNLGPGTP DTKPDPDENKAFLDVEFGVYPWIVRDQDADLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55472; Mature: 55472
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKLLLSFALAAAMTGCINDADVPSGNGDNPATGARGGNMEISFLVPNSSNGSRAASAE CCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCC DSGVYEDGTAEEYKVSNVTLYLFDSSSKNLVTTINVTQSDLGAGTSSGESSKEGQTIVYP CCCCCCCCCCCEEEECEEEEEEEECCCCCEEEEEEEEHHHCCCCCCCCCCCCCCCEEEEE CNKEITVKPGNYDILAVANGSQTFEIGQESTLLGQIDASTYGNGMITSVPGSGFIMSNRG CCCEEEEECCCEEEEEEECCCCEEECCCCCEEEEEECCCCCCCEEEEECCCCCEEEECCC SANMNITVESPEESDTKTQVRINLERAVAKLMVRNDSKEIYTLKNPAGVTYATVRLNNYK CCEEEEEEECCCCCCCEEEEEEEHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEECCEE FINLANKFYTFRHVATLDNAPETPSAPSSYSVEAGNFGNIADNNGYLIDPYFFDKTVAGA EEEEHHHEEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCEEECCHHHCCEECCC TTNFTGGSFYTNHLSKQTDSNWSGLADAGKYVSMYCLENCMFRPAQNTVYTTGIMLKGTF CCCCCCCCEEEHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEC TPEASQTIGNNGNPVEDPLVFNTLYYFNYKFYTTLAAVGKYGDANIDGLTEESSDAELAA CCCHHHHCCCCCCCCCCCEEEEEEEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH KQITRFTKNGGNFSTFYNYWIKHLDNNNPTVMGVMEFGIVRNNIYSVNITSIKNLGPGTP HHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECEEECCEEEEEEEEECCCCCCCC DTKPDPDENKAFLDVEFGVYPWIVRDQDADLE CCCCCCCCCCEEEEEECCCEEEEEECCCCCCC >Mature Secondary Structure MNKKLLLSFALAAAMTGCINDADVPSGNGDNPATGARGGNMEISFLVPNSSNGSRAASAE CCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCC DSGVYEDGTAEEYKVSNVTLYLFDSSSKNLVTTINVTQSDLGAGTSSGESSKEGQTIVYP CCCCCCCCCCCEEEECEEEEEEEECCCCCEEEEEEEEHHHCCCCCCCCCCCCCCCEEEEE CNKEITVKPGNYDILAVANGSQTFEIGQESTLLGQIDASTYGNGMITSVPGSGFIMSNRG CCCEEEEECCCEEEEEEECCCCEEECCCCCEEEEEECCCCCCCEEEEECCCCCEEEECCC SANMNITVESPEESDTKTQVRINLERAVAKLMVRNDSKEIYTLKNPAGVTYATVRLNNYK CCEEEEEEECCCCCCCEEEEEEEHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEECCEE FINLANKFYTFRHVATLDNAPETPSAPSSYSVEAGNFGNIADNNGYLIDPYFFDKTVAGA EEEEHHHEEEEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCEEECCHHHCCEECCC TTNFTGGSFYTNHLSKQTDSNWSGLADAGKYVSMYCLENCMFRPAQNTVYTTGIMLKGTF CCCCCCCCEEEHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEC TPEASQTIGNNGNPVEDPLVFNTLYYFNYKFYTTLAAVGKYGDANIDGLTEESSDAELAA CCCHHHHCCCCCCCCCCCEEEEEEEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCHHHHH KQITRFTKNGGNFSTFYNYWIKHLDNNNPTVMGVMEFGIVRNNIYSVNITSIKNLGPGTP HHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECEEECCEEEEEEEEECCCCCCCC DTKPDPDENKAFLDVEFGVYPWIVRDQDADLE CCCCCCCCCCEEEEEECCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA