Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
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Accession | NC_009614 |
Length | 5,163,189 |
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The map label for this gene is 150005208
Identifier: 150005208
GI number: 150005208
Start: 3400419
End: 3401366
Strand: Reverse
Name: 150005208
Synonym: BVU_2678
Alternate gene names: NA
Gene position: 3401366-3400419 (Counterclockwise)
Preceding gene: 150005209
Following gene: 150005207
Centisome position: 65.88
GC content: 46.73
Gene sequence:
>948_bases ATGAGTAAAACTGCTACTATCCTCTTCGCCCTATGTACTCTTTTCTGTAGTGCATGTTCCTGGGTAGACGATGACCGATC CGATTGCCCCACAGGCTGTTGGCTAAAGTTATCCTATACCTACAATATGCTGAACGTAGATGCCGTGACCACTCAGGTAA AAGATGTCACGCTATTTATTCTCGATCAGGAAGGCAACTATATAGTCCGGGAGGAAGTAGACAGTCTTACATTCCATCAA AATGAATGTACAATCCAAGTCCCCTCCCTGCCTCAGGGAGATTACACCTTTCTGGTCTGGGCAGGATTGGCGGACTCACT TTACCGGCACACTCCCACCTCACTGACACTGTTACGCAATGAGGCGGGAGAACAATCCGAAAAACTTTCATCTCTATTCC ACGGGCGGCTGGACAACGTGCATATCAGCGGCGAATATCAGGTTTTGGCTCTCTCTCTTACTAAAAACACGAATATTCTG AGCTGCATATTGCAAAGCCAGTCGGCCGCCCCTCTGGATACAGATGATTTCCGTCTGGAGCTGACAGCCCGCAACGGATG CATGGATCACCGGAACACTCCGACAGACTCCGTTTCCACCTGCTATCTCCCCTTCATGCAGGAAAGCGCCAACTTGGAAG ACATACAGGTAGTACATGCCGGAATGAATACATTGAGACTGATGGAAAATGACGACACCCGCCTACGGTTAATCCATCAA CCGGATGGAAAAGAGATTTTCGATATTCCGCTGACACCCTACCTGCTTCTGTCACGTAATGTCGAAACAACCTACATGCC TCCACAAGAATATCTTGACAGGCAAGACCGCTATAACCTGATATTTTTCCTGAGCCCGACAAATGATCCGCAGAAACCTT ACATATGTTTACAAATGCAAGTAAACGGCTGGATAATACGTATAAATGATGCAGAATTAGATAAATAA
Upstream 100 bases:
>100_bases AAAACAAAGCATTCCTGGACGTAGAATTCGGAGTATATCCGTGGATTGTCCGTGACCAAGATGCCGACCTTGAATAAAAC AGTCTCAAAATAGAAAAACA
Downstream 100 bases:
>100_bases TCTTTCTGTTTTGAACATTTCAGTCTATATTCGATTCCGTAATGAAAATTACTTATTATGTAAAATCTATAATACGGAAC CTTATGAGAAATAAAAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 315; Mature: 314
Protein sequence:
>315_residues MSKTATILFALCTLFCSACSWVDDDRSDCPTGCWLKLSYTYNMLNVDAVTTQVKDVTLFILDQEGNYIVREEVDSLTFHQ NECTIQVPSLPQGDYTFLVWAGLADSLYRHTPTSLTLLRNEAGEQSEKLSSLFHGRLDNVHISGEYQVLALSLTKNTNIL SCILQSQSAAPLDTDDFRLELTARNGCMDHRNTPTDSVSTCYLPFMQESANLEDIQVVHAGMNTLRLMENDDTRLRLIHQ PDGKEIFDIPLTPYLLLSRNVETTYMPPQEYLDRQDRYNLIFFLSPTNDPQKPYICLQMQVNGWIIRINDAELDK
Sequences:
>Translated_315_residues MSKTATILFALCTLFCSACSWVDDDRSDCPTGCWLKLSYTYNMLNVDAVTTQVKDVTLFILDQEGNYIVREEVDSLTFHQ NECTIQVPSLPQGDYTFLVWAGLADSLYRHTPTSLTLLRNEAGEQSEKLSSLFHGRLDNVHISGEYQVLALSLTKNTNIL SCILQSQSAAPLDTDDFRLELTARNGCMDHRNTPTDSVSTCYLPFMQESANLEDIQVVHAGMNTLRLMENDDTRLRLIHQ PDGKEIFDIPLTPYLLLSRNVETTYMPPQEYLDRQDRYNLIFFLSPTNDPQKPYICLQMQVNGWIIRINDAELDK >Mature_314_residues SKTATILFALCTLFCSACSWVDDDRSDCPTGCWLKLSYTYNMLNVDAVTTQVKDVTLFILDQEGNYIVREEVDSLTFHQN ECTIQVPSLPQGDYTFLVWAGLADSLYRHTPTSLTLLRNEAGEQSEKLSSLFHGRLDNVHISGEYQVLALSLTKNTNILS CILQSQSAAPLDTDDFRLELTARNGCMDHRNTPTDSVSTCYLPFMQESANLEDIQVVHAGMNTLRLMENDDTRLRLIHQP DGKEIFDIPLTPYLLLSRNVETTYMPPQEYLDRQDRYNLIFFLSPTNDPQKPYICLQMQVNGWIIRINDAELDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35914; Mature: 35783
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKTATILFALCTLFCSACSWVDDDRSDCPTGCWLKLSYTYNMLNVDAVTTQVKDVTLFI CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEEEEHEEEEEEEEEEEE LDQEGNYIVREEVDSLTFHQNECTIQVPSLPQGDYTFLVWAGLADSLYRHTPTSLTLLRN EECCCCEEEEECCCCEEEECCCCEEECCCCCCCCEEEEEEECHHHHHHHCCCCEEEEEEC EAGEQSEKLSSLFHGRLDNVHISGEYQVLALSLTKNTNILSCILQSQSAAPLDTDDFRLE CCCCHHHHHHHHHCCCCCCEEECCCEEEEEEEEECCCCEEEEEECCCCCCCCCCCCEEEE LTARNGCMDHRNTPTDSVSTCYLPFMQESANLEDIQVVHAGMNTLRLMENDDTRLRLIHQ EEECCCCCCCCCCCCCCCEEEEEEHHHCCCCCCCEEEEECCCCEEEEEECCCCEEEEEEC PDGKEIFDIPLTPYLLLSRNVETTYMPPQEYLDRQDRYNLIFFLSPTNDPQKPYICLQMQ CCCCEEEECCCCCEEEEECCCCEEECCHHHHHCCCCCCEEEEEECCCCCCCCCEEEEEEE VNGWIIRINDAELDK ECCEEEEEECCCCCC >Mature Secondary Structure SKTATILFALCTLFCSACSWVDDDRSDCPTGCWLKLSYTYNMLNVDAVTTQVKDVTLFI CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEEEEHEEEEEEEEEEEE LDQEGNYIVREEVDSLTFHQNECTIQVPSLPQGDYTFLVWAGLADSLYRHTPTSLTLLRN EECCCCEEEEECCCCEEEECCCCEEECCCCCCCCEEEEEEECHHHHHHHCCCCEEEEEEC EAGEQSEKLSSLFHGRLDNVHISGEYQVLALSLTKNTNILSCILQSQSAAPLDTDDFRLE CCCCHHHHHHHHHCCCCCCEEECCCEEEEEEEEECCCCEEEEEECCCCCCCCCCCCEEEE LTARNGCMDHRNTPTDSVSTCYLPFMQESANLEDIQVVHAGMNTLRLMENDDTRLRLIHQ EEECCCCCCCCCCCCCCCEEEEEEHHHCCCCCCCEEEEECCCCEEEEEECCCCEEEEEEC PDGKEIFDIPLTPYLLLSRNVETTYMPPQEYLDRQDRYNLIFFLSPTNDPQKPYICLQMQ CCCCEEEECCCCCEEEEECCCCEEECCHHHHHCCCCCCEEEEEECCCCCCCCCEEEEEEE VNGWIIRINDAELDK ECCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA