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The map label for this gene is ygfA [C]

Identifier: 148828041

GI number: 148828041

Start: 1436333

End: 1436896

Strand: Direct

Name: ygfA [C]

Synonym: CGSHiGG_07810

Alternate gene names: 148828041

Gene position: 1436333-1436896 (Clockwise)

Preceding gene: 148828040

Following gene: 148828042

Centisome position: 76.11

GC content: 37.06

Gene sequence:

>564_bases
ATGAATACTCAAAAACGCCAGCAAATCCGCACTGAAATCCGAAAAATACGTGCAAATTTAACTGCACTTCAACAGCACCA
AGCTGAGCAATCGGTTACTCAACAGGCGTTAAATCTTATCGAGCAACGACAAGCCAAAAATATTGCATTATATTTTTCTT
TTGATGGTGAAATTTCCACAAAAGCCTTAATCCAATCCCTGTGGATGCAAAACAAAAATGTGTATTTGCCTGTTTTACAT
CCTTTTACTAAACATCATTTATTGTTTTTACGCTATTTACCTGATACGCCAATGAAACAAAATCAGTTTGGCATTTGGGA
GCCAAAGCTAAATGTTCAAAATGTTTTGCCATTAAATGAACTGGATATTTTATTTACGCCATTGGTAGCTTTTGATAAAA
AAGGAAATCGCCTTGGTATGGGCGGTGGATTTTATGATCGCACGTTGCAGAATTGGCAAAATAAATCTTTTATTCCAGTG
GGGTTAGCGTACCAATGTCAGCAAGTAGAAAATCTTCCCACTGAGCATTGGGATGTGCCACTATTCGATATTTTGGTAGG
TTGA

Upstream 100 bases:

>100_bases
GGCTAAGAAACCTGAAAACGGTATCAACTGATTTCCTTGAACCGTCGGGTTCAAGGACTACTGCCCGCAGCGGCACTCTG
GGGTCTTCCTTTTCATTTCT

Downstream 100 bases:

>100_bases
AACCTATCATCAAATTTTTATTGATAGATAAAATCAAAATATTTCATTTTTTCTCTTGAAATTTATTCAACCGAGCTTAC
TTAGTTTATGCAAATGGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MNTQKRQQIRTEIRKIRANLTALQQHQAEQSVTQQALNLIEQRQAKNIALYFSFDGEISTKALIQSLWMQNKNVYLPVLH
PFTKHHLLFLRYLPDTPMKQNQFGIWEPKLNVQNVLPLNELDILFTPLVAFDKKGNRLGMGGGFYDRTLQNWQNKSFIPV
GLAYQCQQVENLPTEHWDVPLFDILVG

Sequences:

>Translated_187_residues
MNTQKRQQIRTEIRKIRANLTALQQHQAEQSVTQQALNLIEQRQAKNIALYFSFDGEISTKALIQSLWMQNKNVYLPVLH
PFTKHHLLFLRYLPDTPMKQNQFGIWEPKLNVQNVLPLNELDILFTPLVAFDKKGNRLGMGGGFYDRTLQNWQNKSFIPV
GLAYQCQQVENLPTEHWDVPLFDILVG
>Mature_187_residues
MNTQKRQQIRTEIRKIRANLTALQQHQAEQSVTQQALNLIEQRQAKNIALYFSFDGEISTKALIQSLWMQNKNVYLPVLH
PFTKHHLLFLRYLPDTPMKQNQFGIWEPKLNVQNVLPLNELDILFTPLVAFDKKGNRLGMGGGFYDRTLQNWQNKSFIPV
GLAYQCQQVENLPTEHWDVPLFDILVG

Specific function: Unknown

COG id: COG0212

COG function: function code H; 5-formyltetrahydrofolate cyclo-ligase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 5-formyltetrahydrofolate cyclo-ligase family [H]

Homologues:

Organism=Escherichia coli, GI1789278, Length=169, Percent_Identity=53.2544378698225, Blast_Score=187, Evalue=5e-49,
Organism=Caenorhabditis elegans, GI17510857, Length=194, Percent_Identity=27.319587628866, Blast_Score=66, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002698 [H]

Pfam domain/function: PF01812 5-FTHF_cyc-lig [H]

EC number: NA

Molecular weight: Translated: 21786; Mature: 21786

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTQKRQQIRTEIRKIRANLTALQQHQAEQSVTQQALNLIEQRQAKNIALYFSFDGEIST
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHH
KALIQSLWMQNKNVYLPVLHPFTKHHLLFLRYLPDTPMKQNQFGIWEPKLNVQNVLPLNE
HHHHHHHHHCCCCEEEEEECCCCHHHEEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCH
LDILFTPLVAFDKKGNRLGMGGGFYDRTLQNWQNKSFIPVGLAYQCQQVENLPTEHWDVP
HHHHHHHHHHHCCCCCEECCCCCHHHHHHHHCCCCCEEEECHHHHHHHHHCCCCCCCCCC
LFDILVG
HHHHHCC
>Mature Secondary Structure
MNTQKRQQIRTEIRKIRANLTALQQHQAEQSVTQQALNLIEQRQAKNIALYFSFDGEIST
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHH
KALIQSLWMQNKNVYLPVLHPFTKHHLLFLRYLPDTPMKQNQFGIWEPKLNVQNVLPLNE
HHHHHHHHHCCCCEEEEEECCCCHHHEEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCH
LDILFTPLVAFDKKGNRLGMGGGFYDRTLQNWQNKSFIPVGLAYQCQQVENLPTEHWDVP
HHHHHHHHHHHCCCCCEECCCCCHHHHHHHHCCCCCEEEECHHHHHHHHHCCCCCCCCCC
LFDILVG
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]