Click here to switch to the map view.

The map label for this gene is fucA [H]

Identifier: 148827901

GI number: 148827901

Start: 1288352

End: 1289002

Strand: Reverse

Name: fucA [H]

Synonym: CGSHiGG_07000

Alternate gene names: 148827901

Gene position: 1289002-1288352 (Counterclockwise)

Preceding gene: 148827902

Following gene: 148827900

Centisome position: 68.3

GC content: 38.56

Gene sequence:

>651_bases
ATGAACAGAGCAGAATTATCACAAAAAATCATTGATACTTGTCTTGAAATGACAAAATTAGGTTTAAATCAAGGCACCGC
GGGAAACGTTAGTGTTCGTTATAAAGATGGAATGCTGATTACCCCGACAGGTATGCCATATCACTTAATGAAGACAGAAA
ATATTGTTTATGTTGATGGAAATGGCAAACACGAAGAAAATAAATTACCATCAAGCGAATGGCAATTTCACTTGAGTGTT
TATCATACTCGCCCTGAAGCAAATGCCGTTGTCCACAATCATTCCATTCACTGTGCAGGCTTATCCATTCTCGAAAAACC
TATTCCTGCAATTCATTACATGGTAGCCGTAAGCGGCACAGATCATATTCCTTGTGTACCTTATGCAACATTTGGTAGTC
ACGAATTAGCTAGTTATGTCGCAACGGGAATCAAAGAAAGCAAAGCCATTTTACTAGCACACCATGGTTTAATCACTTGC
GGAGAAAACCTAGATAAAGCCTTATGGCTCGCACAAGAAGTAGAAGTATTAGCGTCTTGGTATTTGAAATTACTCTCTAC
AGGCTTAGAAATTCCACTGCTCAGCAAAGAGCAAATGCAAGTAGTGTTAGGTAAATTCCACACCTATGGATTACGTATTG
AAGAATCCTAA

Upstream 100 bases:

>100_bases
GCTTATGCTGTTGTTGTCAGTGGTGAGATCGCAAAATATGGCAACATTATCATTAAAAAAGGGGTTACTCCCATTTTATA
AACAATAGAGGTACTACAAA

Downstream 100 bases:

>100_bases
ATCTTGTTATACCCCATCACTTACATGAGGAAAACATTATGAACGCCAAAGTTTTAGAAAAGAAATTCATCGTCCCCTTT
GTGCTTATTACTAGCTTATT

Product: L-fuculose phosphate aldolase

Products: NA

Alternate protein names: L-fuculose-1-phosphate aldolase [H]

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MNRAELSQKIIDTCLEMTKLGLNQGTAGNVSVRYKDGMLITPTGMPYHLMKTENIVYVDGNGKHEENKLPSSEWQFHLSV
YHTRPEANAVVHNHSIHCAGLSILEKPIPAIHYMVAVSGTDHIPCVPYATFGSHELASYVATGIKESKAILLAHHGLITC
GENLDKALWLAQEVEVLASWYLKLLSTGLEIPLLSKEQMQVVLGKFHTYGLRIEES

Sequences:

>Translated_216_residues
MNRAELSQKIIDTCLEMTKLGLNQGTAGNVSVRYKDGMLITPTGMPYHLMKTENIVYVDGNGKHEENKLPSSEWQFHLSV
YHTRPEANAVVHNHSIHCAGLSILEKPIPAIHYMVAVSGTDHIPCVPYATFGSHELASYVATGIKESKAILLAHHGLITC
GENLDKALWLAQEVEVLASWYLKLLSTGLEIPLLSKEQMQVVLGKFHTYGLRIEES
>Mature_216_residues
MNRAELSQKIIDTCLEMTKLGLNQGTAGNVSVRYKDGMLITPTGMPYHLMKTENIVYVDGNGKHEENKLPSSEWQFHLSV
YHTRPEANAVVHNHSIHCAGLSILEKPIPAIHYMVAVSGTDHIPCVPYATFGSHELASYVATGIKESKAILLAHHGLITC
GENLDKALWLAQEVEVLASWYLKLLSTGLEIPLLSKEQMQVVLGKFHTYGLRIEES

Specific function: Fucose metabolism; third step. [C]

COG id: COG0235

COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldolase class II family. AraD/FucA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789164, Length=215, Percent_Identity=65.1162790697674, Blast_Score=307, Evalue=4e-85,
Organism=Escherichia coli, GI1789094, Length=177, Percent_Identity=33.8983050847458, Blast_Score=84, Evalue=5e-18,
Organism=Escherichia coli, GI1790642, Length=124, Percent_Identity=33.8709677419355, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001303
- InterPro:   IPR004782 [H]

Pfam domain/function: PF00596 Aldolase_II [H]

EC number: =4.1.2.17 [H]

Molecular weight: Translated: 23945; Mature: 23945

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRAELSQKIIDTCLEMTKLGLNQGTAGNVSVRYKDGMLITPTGMPYHLMKTENIVYVDG
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCEEECCCCCCEEEEECCCEEEECC
NGKHEENKLPSSEWQFHLSVYHTRPEANAVVHNHSIHCAGLSILEKPIPAIHYMVAVSGT
CCCCCCCCCCCCCEEEEEEEEEECCCCCEEEECCEEEECCHHHHHCCCCCEEEEEEECCC
DHIPCVPYATFGSHELASYVATGIKESKAILLAHHGLITCGENLDKALWLAQEVEVLASW
CCCCCCEECCCCCHHHHHHHHHCCCCCCEEEEEECCEEEECCCHHHHHHHHHHHHHHHHH
YLKLLSTGLEIPLLSKEQMQVVLGKFHTYGLRIEES
HHHHHHCCCCCEECCHHHHHHHHHHHHEEEEEEECC
>Mature Secondary Structure
MNRAELSQKIIDTCLEMTKLGLNQGTAGNVSVRYKDGMLITPTGMPYHLMKTENIVYVDG
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCEEECCCCCCEEEEECCCEEEECC
NGKHEENKLPSSEWQFHLSVYHTRPEANAVVHNHSIHCAGLSILEKPIPAIHYMVAVSGT
CCCCCCCCCCCCCEEEEEEEEEECCCCCEEEECCEEEECCHHHHHCCCCCEEEEEEECCC
DHIPCVPYATFGSHELASYVATGIKESKAILLAHHGLITCGENLDKALWLAQEVEVLASW
CCCCCCEECCCCCHHHHHHHHHCCCCCCEEEEEECCEEEECCCHHHHHHHHHHHHHHHHH
YLKLLSTGLEIPLLSKEQMQVVLGKFHTYGLRIEES
HHHHHHCCCCCEECCHHHHHHHHHHHHEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]