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The map label for this gene is hel [H]

Identifier: 148827866

GI number: 148827866

Start: 1232226

End: 1233050

Strand: Direct

Name: hel [H]

Synonym: CGSHiGG_06760

Alternate gene names: 148827866

Gene position: 1232226-1233050 (Clockwise)

Preceding gene: 148827865

Following gene: 148827867

Centisome position: 65.29

GC content: 40.48

Gene sequence:

>825_bases
ATGAAAACAACGTTAAAAATGACCGCACTTGCGGCTCTTTCTGCTTTTGTTTTAGCTGGCTGTGGTTCACACCAAATGAA
ATCAGAAGAACATGCAAATATGCAATTACAACAACAAGCGGTGCTTGGATTAAACTGGATGCAAGATTCTGGCGAATATA
GAGCATTAGCTTATCAAGCGTACAATGCGGCAAAAGTTGCATTTGATCACGCAAAAGTGGCAAAAGGTAAGAAAAAAGCG
GTTGTGGCTGATTTAGATGAAACTATGTTAGACAACAGCCCTTATGCTGGCTGGCAAGTTCAAAATAACAAACCATTCGA
TGGTAAAGATTGGACTCGTTGGGTAGACGCGCGTCAATCTCGTGCCGTTCCGGGTGCGGTAGAATTTAATAATTATGTAA
ACAGCCACAAAGGTAAAGTGTTCTACGTAACAAACCGCAAAGACAGCACTGAAAAAGCAGGCACTATCGATGATATGAAA
CGCTTAGGTTTCAATGGCGTGGAAGAATCTGCATTTTATTTGAAAAAAGACAAATCAGCTAAAGCGGCTCGTTTTGCAGA
AATTGAAAAACAAGGCTATGAAATCGTACTTTATGTAGGTGATAACTTAGATGACTTCGGTAATACCGTATATGGCAAAT
TAAACGCTGACCGCCGTGCATTCGTTGATCAAAACCAAGGCAAATTTGGTAAAACTTTCATCATGTTACCTAACGCAAAC
TACGGTGGCTGGGAAGGCGGTTTAGCTGAAGGGTATTTCAAAAAAGATACACAAGGCCAAATCAAAGCTCGTTTAGATGC
AGTACAAGCTTGGGATGGTAAATAA

Upstream 100 bases:

>100_bases
TATTTACGGTTATTAATGCCATCTATGATGAAAAACACTTTTCAATTGAAAAGTGTTTTTCAGAAAGACTTACTATACCC
TTAATGAATAGGAACATAAT

Downstream 100 bases:

>100_bases
TTTTCCATTAAAAAGATCGATTTAAATATCGATTTTGAAAATTTAATTGAGGGGCTAAGCTCAGTTTTTACTGGCTTAGC
CTTTTTAATTTTTCAAGTTC

Product: lipoprotein E

Products: NA

Alternate protein names: Outer membrane protein P4; OMP P4 [H]

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MKTTLKMTALAALSAFVLAGCGSHQMKSEEHANMQLQQQAVLGLNWMQDSGEYRALAYQAYNAAKVAFDHAKVAKGKKKA
VVADLDETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQSRAVPGAVEFNNYVNSHKGKVFYVTNRKDSTEKAGTIDDMK
RLGFNGVEESAFYLKKDKSAKAARFAEIEKQGYEIVLYVGDNLDDFGNTVYGKLNADRRAFVDQNQGKFGKTFIMLPNAN
YGGWEGGLAEGYFKKDTQGQIKARLDAVQAWDGK

Sequences:

>Translated_274_residues
MKTTLKMTALAALSAFVLAGCGSHQMKSEEHANMQLQQQAVLGLNWMQDSGEYRALAYQAYNAAKVAFDHAKVAKGKKKA
VVADLDETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQSRAVPGAVEFNNYVNSHKGKVFYVTNRKDSTEKAGTIDDMK
RLGFNGVEESAFYLKKDKSAKAARFAEIEKQGYEIVLYVGDNLDDFGNTVYGKLNADRRAFVDQNQGKFGKTFIMLPNAN
YGGWEGGLAEGYFKKDTQGQIKARLDAVQAWDGK
>Mature_274_residues
MKTTLKMTALAALSAFVLAGCGSHQMKSEEHANMQLQQQAVLGLNWMQDSGEYRALAYQAYNAAKVAFDHAKVAKGKKKA
VVADLDETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQSRAVPGAVEFNNYVNSHKGKVFYVTNRKDSTEKAGTIDDMK
RLGFNGVEESAFYLKKDKSAKAARFAEIEKQGYEIVLYVGDNLDDFGNTVYGKLNADRRAFVDQNQGKFGKTFIMLPNAN
YGGWEGGLAEGYFKKDTQGQIKARLDAVQAWDGK

Specific function: Unknown

COG id: COG2503

COG function: function code R; Predicted secreted acid phosphatase

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005519
- InterPro:   IPR023214
- InterPro:   IPR006423 [H]

Pfam domain/function: PF03767 Acid_phosphat_B [H]

EC number: NA

Molecular weight: Translated: 30530; Mature: 30530

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTTLKMTALAALSAFVLAGCGSHQMKSEEHANMQLQQQAVLGLNWMQDSGEYRALAYQA
CCCCHHHHHHHHHHHHHHHCCCCHHCCCHHHCCHHHHHHHHHCCEEECCCCCEEEEEEEC
YNAAKVAFDHAKVAKGKKKAVVADLDETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQS
CCCHHHHHHHHHHHCCCCCEEEECCHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHHHHH
RAVPGAVEFNNYVNSHKGKVFYVTNRKDSTEKAGTIDDMKRLGFNGVEESAFYLKKDKSA
CCCCCCEEHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHCCCCCCCCCEEEEECCCCC
KAARFAEIEKQGYEIVLYVGDNLDDFGNTVYGKLNADRRAFVDQNQGKFGKTFIMLPNAN
HHHHHHHHHHCCCEEEEEECCCCCHHCCEEEEEECCCCHHHHCCCCCCCCCEEEEEECCC
YGGWEGGLAEGYFKKDTQGQIKARLDAVQAWDGK
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKTTLKMTALAALSAFVLAGCGSHQMKSEEHANMQLQQQAVLGLNWMQDSGEYRALAYQA
CCCCHHHHHHHHHHHHHHHCCCCHHCCCHHHCCHHHHHHHHHCCEEECCCCCEEEEEEEC
YNAAKVAFDHAKVAKGKKKAVVADLDETMLDNSPYAGWQVQNNKPFDGKDWTRWVDARQS
CCCHHHHHHHHHHHCCCCCEEEECCHHHHHCCCCCCCEEECCCCCCCCCHHHHHHHHHHH
RAVPGAVEFNNYVNSHKGKVFYVTNRKDSTEKAGTIDDMKRLGFNGVEESAFYLKKDKSA
CCCCCCEEHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHCCCCCCCCCEEEEECCCCC
KAARFAEIEKQGYEIVLYVGDNLDDFGNTVYGKLNADRRAFVDQNQGKFGKTFIMLPNAN
HHHHHHHHHHCCCEEEEEECCCCCHHCCEEEEEECCCCHHHHCCCCCCCCCEEEEEECCC
YGGWEGGLAEGYFKKDTQGQIKARLDAVQAWDGK
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1715322; 7542800 [H]