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The map label for this gene is yhiD [C]

Identifier: 148827824

GI number: 148827824

Start: 1187888

End: 1188604

Strand: Reverse

Name: yhiD [C]

Synonym: CGSHiGG_06510

Alternate gene names: 148827824

Gene position: 1188604-1187888 (Counterclockwise)

Preceding gene: 148827826

Following gene: 148827823

Centisome position: 62.98

GC content: 40.86

Gene sequence:

>717_bases
ATGGAAAATTCATCCTTACTTTTAACCGCACTTTTCGATCCTGATCACTTAATTATTTTTAGCAAAATGCTATTGGCGAT
GGTGCTTGGTAGTATTATTGGCTTAGAGCGTGAACTTAAACGTAAACCTGTGGGTGTAAAAACCTGCGCTATTATTGCCG
TCACCACTTGTGTGCTAACCATTGTTTCGATTCAAGCCGCAGAGCATTATGCACAAGTTTCAGACAATATTCGTACGGAT
CCGATGCGTCTTGCGGCTCAAGTGATTAGTGGAATCGGTTTTTTAGGTGCTGGTGTGATTTTGCATAAGAAAAATGATGC
GATTTCAGGTTTAACCACTGCGGCGATTATTTGGGCTTCTGCGGGGATCGGTATTGCTGCTGGAGCAGGTTTCGTATTCG
ATGCGGTCATTGCAACTGTGATGATTTTGGTGTCTATTCGATTAAGTCCGTTGGTACAACGTTGGGTACATCGTAAATCG
CAACGTCGTCGGACAAAATTCAATATTCTTGTCAATGGTGCGGAAAGTATTGGAAAAGTCACTCAATTGTTAGTAAACAA
TCAGTATCGTATTGAACATATACAAGTGAAAGATCAAAGTAGTGGTGAAGTGCGGTTACAAATCTGTTGTTTTTCCATTG
ATTCCACAATGTTGAAAGATGCGTATGCGTTGTTGAAAGCGGAAGAAGGTGTAATGAGTGTGGAAGTAGATAACTAG

Upstream 100 bases:

>100_bases
ATTTTCGCAAGAAAGGCGATAAATTAAAGGCTTGGAAGAGTAAAGATTTTAAGCTAAGTGATGTAGAATAGATGGTTATG
TCGGAATCATTTTTATCATT

Downstream 100 bases:

>100_bases
AAAAAGAGTGATTAAATTAAATTTTCTTTTAAATTAACCACACTTTTTTATTTTTTATTTAATTTCTTTCACAACAGATC
AATTTTCATTAAAAATACTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MENSSLLLTALFDPDHLIIFSKMLLAMVLGSIIGLERELKRKPVGVKTCAIIAVTTCVLTIVSIQAAEHYAQVSDNIRTD
PMRLAAQVISGIGFLGAGVILHKKNDAISGLTTAAIIWASAGIGIAAGAGFVFDAVIATVMILVSIRLSPLVQRWVHRKS
QRRRTKFNILVNGAESIGKVTQLLVNNQYRIEHIQVKDQSSGEVRLQICCFSIDSTMLKDAYALLKAEEGVMSVEVDN

Sequences:

>Translated_238_residues
MENSSLLLTALFDPDHLIIFSKMLLAMVLGSIIGLERELKRKPVGVKTCAIIAVTTCVLTIVSIQAAEHYAQVSDNIRTD
PMRLAAQVISGIGFLGAGVILHKKNDAISGLTTAAIIWASAGIGIAAGAGFVFDAVIATVMILVSIRLSPLVQRWVHRKS
QRRRTKFNILVNGAESIGKVTQLLVNNQYRIEHIQVKDQSSGEVRLQICCFSIDSTMLKDAYALLKAEEGVMSVEVDN
>Mature_238_residues
MENSSLLLTALFDPDHLIIFSKMLLAMVLGSIIGLERELKRKPVGVKTCAIIAVTTCVLTIVSIQAAEHYAQVSDNIRTD
PMRLAAQVISGIGFLGAGVILHKKNDAISGLTTAAIIWASAGIGIAAGAGFVFDAVIATVMILVSIRLSPLVQRWVHRKS
QRRRTKFNILVNGAESIGKVTQLLVNNQYRIEHIQVKDQSSGEVRLQICCFSIDSTMLKDAYALLKAEEGVMSVEVDN

Specific function: Unknown

COG id: COG1285

COG function: function code S; Uncharacterized membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MgtC/SapB family [H]

Homologues:

Organism=Escherichia coli, GI1789924, Length=225, Percent_Identity=32, Blast_Score=84, Evalue=6e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003416 [H]

Pfam domain/function: PF02308 MgtC [H]

EC number: NA

Molecular weight: Translated: 25815; Mature: 25815

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENSSLLLTALFDPDHLIIFSKMLLAMVLGSIIGLERELKRKPVGVKTCAIIAVTTCVLT
CCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
IVSIQAAEHYAQVSDNIRTDPMRLAAQVISGIGFLGAGVILHKKNDAISGLTTAAIIWAS
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHH
AGIGIAAGAGFVFDAVIATVMILVSIRLSPLVQRWVHRKSQRRRTKFNILVNGAESIGKV
CCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECHHHHHHH
TQLLVNNQYRIEHIQVKDQSSGEVRLQICCFSIDSTMLKDAYALLKAEEGVMSVEVDN
HHHHHCCCEEEEEEEEECCCCCCEEEEEEEEECCHHHHHHHHHHHHHCCCEEEEEECC
>Mature Secondary Structure
MENSSLLLTALFDPDHLIIFSKMLLAMVLGSIIGLERELKRKPVGVKTCAIIAVTTCVLT
CCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
IVSIQAAEHYAQVSDNIRTDPMRLAAQVISGIGFLGAGVILHKKNDAISGLTTAAIIWAS
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHH
AGIGIAAGAGFVFDAVIATVMILVSIRLSPLVQRWVHRKSQRRRTKFNILVNGAESIGKV
CCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECHHHHHHH
TQLLVNNQYRIEHIQVKDQSSGEVRLQICCFSIDSTMLKDAYALLKAEEGVMSVEVDN
HHHHHCCCEEEEEEEEECCCCCCEEEEEEEEECCHHHHHHHHHHHHHCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]