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The map label for this gene is dcuD [C]

Identifier: 148827801

GI number: 148827801

Start: 1155698

End: 1156993

Strand: Direct

Name: dcuD [C]

Synonym: CGSHiGG_06350

Alternate gene names: 148827801

Gene position: 1155698-1156993 (Clockwise)

Preceding gene: 148827800

Following gene: 148827804

Centisome position: 61.24

GC content: 40.28

Gene sequence:

>1296_bases
ATGGAATTATTCAAATCCATCGTTGCAGTGATTGGCATTATTGCCACAATTTATTTTCTGATTAAAAAAGCCGAAACCCG
AACAGTTTTGATTGGTGTCGGTTTAATAATGTCCATTCTGACGCTGAATCCAATGGGTGCATTAGATGCTTTTGCCAAAA
GCATGACATCTGGCGGATTAATTATGGCCATCTGTTCTAGTATGGGTTTTGCTTATGTAATGAAATACACTCAATGTGAC
ACTCATCTAGTGCATTTACTTACCAAACCATTAAGCGGATTAAAATTCTTCTTAATTCCGATTGCAACAGTCATCACCTT
TTTCATCAATATTGCTATTCCTTCTGCTGCTGGTTGTGCAGCTGCGGTTGGTGCAACATTAATTCCTGTTTTAAAAAGTG
CGGGTGTTCGACCAGCTACTGCTGGTGCAGCTATTTTAGCAGGAACTTTTGGATCAATGATGAGCCCAGGTTCTTCTCAC
TCAGCAATGATTAGTGAAATGTCAGGCTTAACTATCACTCAAGTAAACCTTTCACATGCGCCATATAACATGATTGCGGG
AGCAATAGGTGCTGTTGTTTTAACAATTCTTGCGCTTGTTTTTAAAGATTATGGTGAACAACATCGCCAAGCTTATCTTG
CAGAACAAAAAGAAAATGAAATTAAAGTTGTTGAAGGTGTCAATGTACTTTATGCCCTTGCACCATTAATACCATTAGTT
ATTTTAGTGATTGGTGGAACATCATTACAACAAGTACCAGGTCTTGAATGGACTAAAATGGGCGTTCCTCAAGCGATGCT
TATTGGTGCAATTTACGGCATTATCGTAACTCGCATTTCCGCAGTAAAAATTACTGAAGAATTTTTCAATGGTATGGGCA
ATTCTTATGCAAACGTACTTGGTATCATCATTGCAGCCAGCGTATTTGTAGCAGGATTAAAATCTACGGGCGCAGTTGAT
GCGGCAATTTCTTTCTTAAAAGAATCCAACGAATTTGTACGTTGGGGTGCAACAATTGGGCCATTCTTAATGGGCTTAAT
TACAGGCTCTGGCGATGCAGCAGCGATTGCCTTTAACACTGCCGTCACGCCACATGCTGTAGAACTCGGTTACACTCACG
TAAATCTTGGTATGGCAGCAGCTATTGCTGGTGCAATCGGTCGTACAGCTTCACCAATTGCAGGTGTAACCATTGTTTGT
GCAGGCCTTGCTATGGTAAGCCCAGTAGAAATGGTAAAACGTACCGCACCAGGCATGATACTTGCTGTTTTATTCTTAGC
ATTATTTATGTTGTAA

Upstream 100 bases:

>100_bases
TGTTGGGTGAAAATCCTATTTTGTGCTTCAGTGAAAATATGGAATGTGGCACATTTGATATCAATACAACTTTTTCTTAT
TAACTTAAAAGGAACATATA

Downstream 100 bases:

>100_bases
AAATAGTAAAAAATTGACCGCACTTTATTTAAGTGCGGTCTGTTTTTATAGACTTTTAAAGGAGAAAAAAATGAACTTAG
ATTTAAATCAACTTGTTAAA

Product: C4-dicarboxylate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MELFKSIVAVIGIIATIYFLIKKAETRTVLIGVGLIMSILTLNPMGALDAFAKSMTSGGLIMAICSSMGFAYVMKYTQCD
THLVHLLTKPLSGLKFFLIPIATVITFFINIAIPSAAGCAAAVGATLIPVLKSAGVRPATAGAAILAGTFGSMMSPGSSH
SAMISEMSGLTITQVNLSHAPYNMIAGAIGAVVLTILALVFKDYGEQHRQAYLAEQKENEIKVVEGVNVLYALAPLIPLV
ILVIGGTSLQQVPGLEWTKMGVPQAMLIGAIYGIIVTRISAVKITEEFFNGMGNSYANVLGIIIAASVFVAGLKSTGAVD
AAISFLKESNEFVRWGATIGPFLMGLITGSGDAAAIAFNTAVTPHAVELGYTHVNLGMAAAIAGAIGRTASPIAGVTIVC
AGLAMVSPVEMVKRTAPGMILAVLFLALFML

Sequences:

>Translated_431_residues
MELFKSIVAVIGIIATIYFLIKKAETRTVLIGVGLIMSILTLNPMGALDAFAKSMTSGGLIMAICSSMGFAYVMKYTQCD
THLVHLLTKPLSGLKFFLIPIATVITFFINIAIPSAAGCAAAVGATLIPVLKSAGVRPATAGAAILAGTFGSMMSPGSSH
SAMISEMSGLTITQVNLSHAPYNMIAGAIGAVVLTILALVFKDYGEQHRQAYLAEQKENEIKVVEGVNVLYALAPLIPLV
ILVIGGTSLQQVPGLEWTKMGVPQAMLIGAIYGIIVTRISAVKITEEFFNGMGNSYANVLGIIIAASVFVAGLKSTGAVD
AAISFLKESNEFVRWGATIGPFLMGLITGSGDAAAIAFNTAVTPHAVELGYTHVNLGMAAAIAGAIGRTASPIAGVTIVC
AGLAMVSPVEMVKRTAPGMILAVLFLALFML
>Mature_431_residues
MELFKSIVAVIGIIATIYFLIKKAETRTVLIGVGLIMSILTLNPMGALDAFAKSMTSGGLIMAICSSMGFAYVMKYTQCD
THLVHLLTKPLSGLKFFLIPIATVITFFINIAIPSAAGCAAAVGATLIPVLKSAGVRPATAGAAILAGTFGSMMSPGSSH
SAMISEMSGLTITQVNLSHAPYNMIAGAIGAVVLTILALVFKDYGEQHRQAYLAEQKENEIKVVEGVNVLYALAPLIPLV
ILVIGGTSLQQVPGLEWTKMGVPQAMLIGAIYGIIVTRISAVKITEEFFNGMGNSYANVLGIIIAASVFVAGLKSTGAVD
AAISFLKESNEFVRWGATIGPFLMGLITGSGDAAAIAFNTAVTPHAVELGYTHVNLGMAAAIAGAIGRTASPIAGVTIVC
AGLAMVSPVEMVKRTAPGMILAVLFLALFML

Specific function: Cryptic C4-dicarboxylate carrier [C]

COG id: COG3069

COG function: function code C; C4-dicarboxylate transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dcuC/dcuD transporter (TC 2.A.61) family [H]

Homologues:

Organism=Escherichia coli, GI1789622, Length=456, Percent_Identity=27.6315789473684, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1786839, Length=372, Percent_Identity=23.1182795698925, Blast_Score=62, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018385
- InterPro:   IPR004669 [H]

Pfam domain/function: PF03606 DcuC [H]

EC number: NA

Molecular weight: Translated: 44672; Mature: 44672

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELFKSIVAVIGIIATIYFLIKKAETRTVLIGVGLIMSILTLNPMGALDAFAKSMTSGGL
CHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCHHHHHHHHHHCCCCH
IMAICSSMGFAYVMKYTQCDTHLVHLLTKPLSGLKFFLIPIATVITFFINIAIPSAAGCA
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHH
AAVGATLIPVLKSAGVRPATAGAAILAGTFGSMMSPGSSHSAMISEMSGLTITQVNLSHA
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEECCCC
PYNMIAGAIGAVVLTILALVFKDYGEQHRQAYLAEQKENEIKVVEGVNVLYALAPLIPLV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHH
ILVIGGTSLQQVPGLEWTKMGVPQAMLIGAIYGIIVTRISAVKITEEFFNGMGNSYANVL
HHHHCCCCHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
GIIIAASVFVAGLKSTGAVDAAISFLKESNEFVRWGATIGPFLMGLITGSGDAAAIAFNT
HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHEEECCHHHHHHHHHHCCCCCEEEEEEEC
AVTPHAVELGYTHVNLGMAAAIAGAIGRTASPIAGVTIVCAGLAMVSPVEMVKRTAPGMI
CCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LAVLFLALFML
HHHHHHHHHHC
>Mature Secondary Structure
MELFKSIVAVIGIIATIYFLIKKAETRTVLIGVGLIMSILTLNPMGALDAFAKSMTSGGL
CHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCHHHHHHHHHHCCCCH
IMAICSSMGFAYVMKYTQCDTHLVHLLTKPLSGLKFFLIPIATVITFFINIAIPSAAGCA
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHH
AAVGATLIPVLKSAGVRPATAGAAILAGTFGSMMSPGSSHSAMISEMSGLTITQVNLSHA
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEECCCC
PYNMIAGAIGAVVLTILALVFKDYGEQHRQAYLAEQKENEIKVVEGVNVLYALAPLIPLV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHH
ILVIGGTSLQQVPGLEWTKMGVPQAMLIGAIYGIIVTRISAVKITEEFFNGMGNSYANVL
HHHHCCCCHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
GIIIAASVFVAGLKSTGAVDAAISFLKESNEFVRWGATIGPFLMGLITGSGDAAAIAFNT
HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHEEECCHHHHHHHHHHCCCCCEEEEEEEC
AVTPHAVELGYTHVNLGMAAAIAGAIGRTASPIAGVTIVCAGLAMVSPVEMVKRTAPGMI
CCCCCHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LAVLFLALFML
HHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]