Definition | Mycobacterium tuberculosis F11, complete genome. |
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Accession | NC_009565 |
Length | 4,424,435 |
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The map label for this gene is ybfF [C]
Identifier: 148824365
GI number: 148824365
Start: 3552969
End: 3553868
Strand: Reverse
Name: ybfF [C]
Synonym: TBFG_13192
Alternate gene names: 148824365
Gene position: 3553868-3552969 (Counterclockwise)
Preceding gene: 148824366
Following gene: 148824361
Centisome position: 80.32
GC content: 68.0
Gene sequence:
>900_bases TTGACCGTCCGTGCGGCGGACGGCACCCCGTTACACACCCAGGTGTTCGGGCCGCCTCACGGCTATCCGATTGTGCTGAC GCACGGTTTCGTCTGCGCCATCCGGGCCTGGGCATACCAAATCGCCGACCTGGCCGGCGACTACCGGGTGATCGCCTTCG ACCATCGCGGCCACGGTCGAAGCGGTGTCCCACGGCGTGGCGCCTACAGCCTCAATCACCTTGCGGCCGACCTCGATTCG GTGTTGGACGCTACGTTGGCCCCGCGCGAGCGTGCGGTGGTCGCTGGGCACTCGATGGGCGGCATTACCATTGCCGCCTG GTCGGACCGCTACCGCCACAAAGTCCGCCGCCGCACGGACGCCGTCGCGCTGATCAACACCACCACCGGCGACCTGGTGC GCAAGGTGAAACTGCTGTCGGTGCCACGCGAGTTGTCCCCGGTTCGGGTGCTGGCCGGCCGGAGCCTGGTCAACACGTTC GGCGGGTTTCCACTCCCCGGCGCGGCCAGGGCCTTAAGCCGGCACGTGATCTCCACGCTGGCGGTCGCCGCCGACGCGGA CCCCAGCGCCACGAGACTGGTCTATGAGTTGTTCACCCAGACGTCTGCCGCGGGGCGCGGCGGCTGCGCGAAGATGCTCG TCGAGGAAGTAGGGTCGGCACACCTCAACCTGGATGGTCTGACGGTGCCAACCCTGGTGATCGGCGGCGTACGTGATCGA CTAACGCCGATCAGCCAGTCCCGCAGGATTGCGCGCACCGCGCCCAATGTCGTCGGCCTCGTTGAACTGCCCGGCGGCCA CTGCTCGATGCTGGAACGGCACCAAGAGGTGAACAGCCACCTGCGGGCGCTGGCCGAATCGGTGACCCGGCACGTCCGGG ACCGGCGGATCAGCTCATAG
Upstream 100 bases:
>100_bases ACGGGGCCGCGTCGAAGGGGGAGCGGCGATGAGTGCTCGGAGACCCACTCGAAGCAGCGGGGCTACCCAGATTCCAGACG TCCTACCGCCTAGCCGCACC
Downstream 100 bases:
>100_bases CAGGGCGGCGACCTCGGCGGCGGCACGCTGACCGGATCTGACGGCGCCGTCGAAATACCCGGTCCATTCGTCCGCGGTCT CAGTGCTCGCCCAGTGAATC
Product: non-heme haloperoxidase hpx
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Hydrolase Fold; Lipase; Alpha/Beta Hydrolase; 3-Oxoadipate Enol-Lactonase; Non-Heme Chloroperoxidase; Hydrolase Or Acyltransferase Of Alpha/Beta Superfamily; Chloride Peroxidase; Hydrolase Alpha/Beta Fold Family Protein; 3-Oxoadipate Enol-Lactone Hydrolase; Non-Heme Haloperoxidase; Alpha/Beta Hydrolase Fold Family Protein; Alpha/Beta Fold Family Hydrolase; Carboxylesterase; Hydrolase Alpha/Beta Fold; Alpha/Beta Hydrolase Fold Family Hydrolase; Alpha/Beta Superfamily-Like Protein; Alpha/Beta Hydrolase Fold Containing Protein; Alpha/Beta Family Hydrolase; Non-Heme Haloperoxidase Hpx
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MTVRAADGTPLHTQVFGPPHGYPIVLTHGFVCAIRAWAYQIADLAGDYRVIAFDHRGHGRSGVPRRGAYSLNHLAADLDS VLDATLAPRERAVVAGHSMGGITIAAWSDRYRHKVRRRTDAVALINTTTGDLVRKVKLLSVPRELSPVRVLAGRSLVNTF GGFPLPGAARALSRHVISTLAVAADADPSATRLVYELFTQTSAAGRGGCAKMLVEEVGSAHLNLDGLTVPTLVIGGVRDR LTPISQSRRIARTAPNVVGLVELPGGHCSMLERHQEVNSHLRALAESVTRHVRDRRISS
Sequences:
>Translated_299_residues MTVRAADGTPLHTQVFGPPHGYPIVLTHGFVCAIRAWAYQIADLAGDYRVIAFDHRGHGRSGVPRRGAYSLNHLAADLDS VLDATLAPRERAVVAGHSMGGITIAAWSDRYRHKVRRRTDAVALINTTTGDLVRKVKLLSVPRELSPVRVLAGRSLVNTF GGFPLPGAARALSRHVISTLAVAADADPSATRLVYELFTQTSAAGRGGCAKMLVEEVGSAHLNLDGLTVPTLVIGGVRDR LTPISQSRRIARTAPNVVGLVELPGGHCSMLERHQEVNSHLRALAESVTRHVRDRRISS >Mature_298_residues TVRAADGTPLHTQVFGPPHGYPIVLTHGFVCAIRAWAYQIADLAGDYRVIAFDHRGHGRSGVPRRGAYSLNHLAADLDSV LDATLAPRERAVVAGHSMGGITIAAWSDRYRHKVRRRTDAVALINTTTGDLVRKVKLLSVPRELSPVRVLAGRSLVNTFG GFPLPGAARALSRHVISTLAVAADADPSATRLVYELFTQTSAAGRGGCAKMLVEEVGSAHLNLDGLTVPTLVIGGVRDRL TPISQSRRIARTAPNVVGLVELPGGHCSMLERHQEVNSHLRALAESVTRHVRDRRISS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.1.-.- [C]
Molecular weight: Translated: 32146; Mature: 32015
Theoretical pI: Translated: 11.04; Mature: 11.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVRAADGTPLHTQVFGPPHGYPIVLTHGFVCAIRAWAYQIADLAGDYRVIAFDHRGHGR CEEECCCCCCCEEEECCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCC SGVPRRGAYSLNHLAADLDSVLDATLAPRERAVVAGHSMGGITIAAWSDRYRHKVRRRTD CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEECCHHHHHHHHHHCC AVALINTTTGDLVRKVKLLSVPRELSPVRVLAGRSLVNTFGGFPLPGAARALSRHVISTL EEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH AVAADADPSATRLVYELFTQTSAAGRGGCAKMLVEEVGSAHLNLDGLTVPTLVIGGVRDR HHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEECCCCCCHHHHHHCCHHHH LTPISQSRRIARTAPNVVGLVELPGGHCSMLERHQEVNSHLRALAESVTRHVRDRRISS CCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TVRAADGTPLHTQVFGPPHGYPIVLTHGFVCAIRAWAYQIADLAGDYRVIAFDHRGHGR EEECCCCCCCEEEECCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCC SGVPRRGAYSLNHLAADLDSVLDATLAPRERAVVAGHSMGGITIAAWSDRYRHKVRRRTD CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEECCHHHHHHHHHHCC AVALINTTTGDLVRKVKLLSVPRELSPVRVLAGRSLVNTFGGFPLPGAARALSRHVISTL EEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH AVAADADPSATRLVYELFTQTSAAGRGGCAKMLVEEVGSAHLNLDGLTVPTLVIGGVRDR HHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEECCCCCCHHHHHHCCHHHH LTPISQSRRIARTAPNVVGLVELPGGHCSMLERHQEVNSHLRALAESVTRHVRDRRISS CCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA