Definition | Mycobacterium tuberculosis F11, complete genome. |
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Accession | NC_009565 |
Length | 4,424,435 |
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The map label for this gene is 148824360
Identifier: 148824360
GI number: 148824360
Start: 3547515
End: 3548474
Strand: Reverse
Name: 148824360
Synonym: TBFG_13187
Alternate gene names: NA
Gene position: 3548474-3547515 (Counterclockwise)
Preceding gene: 148824361
Following gene: 148824359
Centisome position: 80.2
GC content: 65.52
Gene sequence:
>960_bases ATGCCCGGTACTAAGCCCGGTAGTGACAAACCGACAGGGCGCGTCGTCGTCGTGATCGTGCTCTTGATGCTTGCTGGCGC TGCCCTGCGCGGCCACCTGCCGGCCGACGACGGTGCACCGCTCGCGGCGGCCGGCGGCAGCCGGGCGGCGCTGATGTTCA TTGTCGCCGCACTTGCCGCGACGCTCGCGCTGATAGCGCTCGCCATCATCACCCGGTTGCGACATCCGCTCCCGGTGGCG CCCAGCGCGGGGGAGCTCTCGGCAATGCTTGGCGGTGCAGCAGGGCGTCCGAACTGGCGTGTGCTGTTGCTCGGACTCGG GACAATCCTGGCCTGGCTGCTGATTGCGATACTGCTGGCACGGTTGTTCGTGCCCGATGATGTCGGTCCTGCTGCGCCCA TACCGGATTCAACCGCTACGCCGGATGCTTCCAGCACCACGCCGTCGCGCCCGCAACCGCCGCAAGACAACAATGACGAC GTGCTCGGCATTCTCTTTGCCAGCACAATCGGCCTGTTCTTGATGGTCGTCGCGGGGTCGCTGATTACCTCGCGACGACA GCGCAAGTCGGCACCGGCTCGTATCAGTGGCGATCGCATCGAGTCTCCGGCGCCCTCGGCGCGTTCGGAATCACTGGCGC GTGCCGCCGAGATCGGACTGGCCGAGATGGCCGACCTCCGCCGCGAACCACGGGAGGCGATAATTGCGTGTTACGTGGCG ATGGAGCGTGAACTGTCGCATGTTCCCGGTGTTGCCCCTCAGGACTTCGACACCCCGACCGAGGTGCTGGCCCGAGCCGT CGAACACCGTGCGCTCCATGGTGCTAGTGCCGCCGCGTTGGTGAGCCTGTTCGCCGAGGCGCGTTTTAGCCCGCACGTGA TGAACGAGGAGCACCGTGAGGTGGCGATGCGTTTGCTTCGACTGGTTCTTGACGAACTGAGCACTCGGACCGCTATATGA
Upstream 100 bases:
>100_bases CCTGGCGGCAGTGTCGTCTGACGTGCCAGTATGAACCAAGCCAGGTTGAACCAACCCCCAGGCCGCAACGGCGGCAGGCA ACCGGTCGAGTGGTGTGCGT
Downstream 100 bases:
>100_bases AAAGGCTTATCGCCCTGGGGATTTTCCTCATCGTGGGGATTGAGCTGCTGGCGCTGATACTGCACGACCGTCGGCTCGTG CTCGCCGGGTCGGGGCTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 319; Mature: 318
Protein sequence:
>319_residues MPGTKPGSDKPTGRVVVVIVLLMLAGAALRGHLPADDGAPLAAAGGSRAALMFIVAALAATLALIALAIITRLRHPLPVA PSAGELSAMLGGAAGRPNWRVLLLGLGTILAWLLIAILLARLFVPDDVGPAAPIPDSTATPDASSTTPSRPQPPQDNNDD VLGILFASTIGLFLMVVAGSLITSRRQRKSAPARISGDRIESPAPSARSESLARAAEIGLAEMADLRREPREAIIACYVA MERELSHVPGVAPQDFDTPTEVLARAVEHRALHGASAAALVSLFAEARFSPHVMNEEHREVAMRLLRLVLDELSTRTAI
Sequences:
>Translated_319_residues MPGTKPGSDKPTGRVVVVIVLLMLAGAALRGHLPADDGAPLAAAGGSRAALMFIVAALAATLALIALAIITRLRHPLPVA PSAGELSAMLGGAAGRPNWRVLLLGLGTILAWLLIAILLARLFVPDDVGPAAPIPDSTATPDASSTTPSRPQPPQDNNDD VLGILFASTIGLFLMVVAGSLITSRRQRKSAPARISGDRIESPAPSARSESLARAAEIGLAEMADLRREPREAIIACYVA MERELSHVPGVAPQDFDTPTEVLARAVEHRALHGASAAALVSLFAEARFSPHVMNEEHREVAMRLLRLVLDELSTRTAI >Mature_318_residues PGTKPGSDKPTGRVVVVIVLLMLAGAALRGHLPADDGAPLAAAGGSRAALMFIVAALAATLALIALAIITRLRHPLPVAP SAGELSAMLGGAAGRPNWRVLLLGLGTILAWLLIAILLARLFVPDDVGPAAPIPDSTATPDASSTTPSRPQPPQDNNDDV LGILFASTIGLFLMVVAGSLITSRRQRKSAPARISGDRIESPAPSARSESLARAAEIGLAEMADLRREPREAIIACYVAM ERELSHVPGVAPQDFDTPTEVLARAVEHRALHGASAAALVSLFAEARFSPHVMNEEHREVAMRLLRLVLDELSTRTAI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33396; Mature: 33265
Theoretical pI: Translated: 7.24; Mature: 7.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGTKPGSDKPTGRVVVVIVLLMLAGAALRGHLPADDGAPLAAAGGSRAALMFIVAALAA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCHHHHHHHHHHHHH TLALIALAIITRLRHPLPVAPSAGELSAMLGGAAGRPNWRVLLLGLGTILAWLLIAILLA HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHH RLFVPDDVGPAAPIPDSTATPDASSTTPSRPQPPQDNNDDVLGILFASTIGLFLMVVAGS HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LITSRRQRKSAPARISGDRIESPAPSARSESLARAAEIGLAEMADLRREPREAIIACYVA HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MERELSHVPGVAPQDFDTPTEVLARAVEHRALHGASAAALVSLFAEARFSPHVMNEEHRE HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCHHHHH VAMRLLRLVLDELSTRTAI HHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PGTKPGSDKPTGRVVVVIVLLMLAGAALRGHLPADDGAPLAAAGGSRAALMFIVAALAA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCHHHHHHHHHHHHH TLALIALAIITRLRHPLPVAPSAGELSAMLGGAAGRPNWRVLLLGLGTILAWLLIAILLA HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHH RLFVPDDVGPAAPIPDSTATPDASSTTPSRPQPPQDNNDDVLGILFASTIGLFLMVVAGS HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LITSRRQRKSAPARISGDRIESPAPSARSESLARAAEIGLAEMADLRREPREAIIACYVA HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MERELSHVPGVAPQDFDTPTEVLARAVEHRALHGASAAALVSLFAEARFSPHVMNEEHRE HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCHHHHH VAMRLLRLVLDELSTRTAI HHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA