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The map label for this gene is PE_PGRS20 [H]

Identifier: 148824289

GI number: 148824289

Start: 3477542

End: 3478855

Strand: Reverse

Name: PE_PGRS20 [H]

Synonym: TBFG_13114

Alternate gene names: 148824289

Gene position: 3478855-3477542 (Counterclockwise)

Preceding gene: 148824290

Following gene: 148824286

Centisome position: 78.63

GC content: 62.4

Gene sequence:

>1314_bases
GTGGTGTCTTATGTTGTTGCGTTGCCGGAGGTGATGTCCGCCGCGGCCACAGACGTGGCTTCGATTGGTTCGGTGGTCGC
GACGGCGAGCCAGGGTGTCGCGGGTGCCACCACGACGGTATTAGCCGCTGCCGAGGACGAGGTGTCAGCCGCGATCGCGG
CTTTGTTTTCCGGCCATGGTCAGGACTATCAAGCTCTTAGCGCACAGCTTGCGGTGTTTCATGAGCGGTTTGTGCAGGCA
TTGACAGGCGCGGCCAAGGGGTATGCCGCCGCCGAGCTGGCCAACGCTTCGCTGTTGCAGAGTGAATTCGCCAGCGGTAT
CGGGAACGGTTTTGCCACGATTCACCAGGAAATTCAGCGGGCCCCCACGGCGCTGGCCGCCGGATTCACGCAGGTTCCGC
CTTTCGCGGCGGCGCAGGCAGGGATCTTCACCGGCACGCCGTCAGGGGCTGCCGGATTCGACATCGCTTCGCTGTGGCCG
GTGAAACCCCTGCTGAGTTTGTCTGCGCTCGAAACTCACTTTGCAATCCCAAACAATCCACTTTTAGCGCTCATTGCCAG
CGACATACCGCCGCTGTCGTGGTTTCTTGGCAACTCCCCACCGCCGTTGCTGAACTCGCTGCTGGGACAGACGGTCCAGT
ACACCACCTATGACGGGATGAGCGTCGTGCAGATCACGCCGGCTCATCCAACCGGCGAATACGTGGTTGCCATTCACGGC
GGCGCGTTTATCCTGCCGCCGTCAATCTTCCACTGGCTCAACTACTCGGTGACGGCTTACCAGACCGGCGCGACCGTGCA
AGTGCCGATTTACCCGTTGGTGCAGGAAGGAGGCACTGCCGGGACGGTAGTACCGGCGATGGCCGGGCTCATCTCCACGC
AAATCGCGCAACACGGGGTCTCCAACGTCAGCGTGGTCGGGGACTCCGCGGGCGGCAACCTCGCACTGGCGGCCGCCCAA
TACATGGTGAGCCAGGGCAACCCAGTACCGTCGTCCATGGTGTTGCTGTCCCCGTGGCTCGATGTGGGGACCTGGCAGAT
CAGCCAGGCGTGGGCAGGCAATCTTGCGGTCAACGACCCGCTGGTCAGTCCGCTGTATGGGTCGCTGAACGGTCTTCCGC
CGACGTATGTCTATTCGGGCTCGCTTGATCCGCTCGCACAACAAGCGGTTGTCCTCGAGCACACAGCCGTAGTCCAAGGA
GCGCCGTTCAGCTTCGTACTGGCCCCCTGGCAAATCCACGACTGGATACTGCTCACCCCCTGGGGTTTGCTGTCCTGGCC
GCAGATTAACCAGCAACTCGGTATCGCCGCCTGA

Upstream 100 bases:

>100_bases
ACTGGCACGTGACTACTCGGCGTGGGCATAAGCTCCGGCTACTCGGCGATCGGTAGTGGCTGGGCAACTGGGGAAGTTGC
CGTGAGGTGGCGGGAGCGGC

Downstream 100 bases:

>100_bases
TCCGGTTCCGCCAGGCCGACCGCGCACATGGTTTTCAGTAGGTGTCGGGCTCGCATTCGGCGAGCCGCGCCCAATGCGGG
CTGGGGAAAGCCTAGTCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 437; Mature: 437

Protein sequence:

>437_residues
MVSYVVALPEVMSAAATDVASIGSVVATASQGVAGATTTVLAAAEDEVSAAIAALFSGHGQDYQALSAQLAVFHERFVQA
LTGAAKGYAAAELANASLLQSEFASGIGNGFATIHQEIQRAPTALAAGFTQVPPFAAAQAGIFTGTPSGAAGFDIASLWP
VKPLLSLSALETHFAIPNNPLLALIASDIPPLSWFLGNSPPPLLNSLLGQTVQYTTYDGMSVVQITPAHPTGEYVVAIHG
GAFILPPSIFHWLNYSVTAYQTGATVQVPIYPLVQEGGTAGTVVPAMAGLISTQIAQHGVSNVSVVGDSAGGNLALAAAQ
YMVSQGNPVPSSMVLLSPWLDVGTWQISQAWAGNLAVNDPLVSPLYGSLNGLPPTYVYSGSLDPLAQQAVVLEHTAVVQG
APFSFVLAPWQIHDWILLTPWGLLSWPQINQQLGIAA

Sequences:

>Translated_437_residues
MVSYVVALPEVMSAAATDVASIGSVVATASQGVAGATTTVLAAAEDEVSAAIAALFSGHGQDYQALSAQLAVFHERFVQA
LTGAAKGYAAAELANASLLQSEFASGIGNGFATIHQEIQRAPTALAAGFTQVPPFAAAQAGIFTGTPSGAAGFDIASLWP
VKPLLSLSALETHFAIPNNPLLALIASDIPPLSWFLGNSPPPLLNSLLGQTVQYTTYDGMSVVQITPAHPTGEYVVAIHG
GAFILPPSIFHWLNYSVTAYQTGATVQVPIYPLVQEGGTAGTVVPAMAGLISTQIAQHGVSNVSVVGDSAGGNLALAAAQ
YMVSQGNPVPSSMVLLSPWLDVGTWQISQAWAGNLAVNDPLVSPLYGSLNGLPPTYVYSGSLDPLAQQAVVLEHTAVVQG
APFSFVLAPWQIHDWILLTPWGLLSWPQINQQLGIAA
>Mature_437_residues
MVSYVVALPEVMSAAATDVASIGSVVATASQGVAGATTTVLAAAEDEVSAAIAALFSGHGQDYQALSAQLAVFHERFVQA
LTGAAKGYAAAELANASLLQSEFASGIGNGFATIHQEIQRAPTALAAGFTQVPPFAAAQAGIFTGTPSGAAGFDIASLWP
VKPLLSLSALETHFAIPNNPLLALIASDIPPLSWFLGNSPPPLLNSLLGQTVQYTTYDGMSVVQITPAHPTGEYVVAIHG
GAFILPPSIFHWLNYSVTAYQTGATVQVPIYPLVQEGGTAGTVVPAMAGLISTQIAQHGVSNVSVVGDSAGGNLALAAAQ
YMVSQGNPVPSSMVLLSPWLDVGTWQISQAWAGNLAVNDPLVSPLYGSLNGLPPTYVYSGSLDPLAQQAVVLEHTAVVQG
APFSFVLAPWQIHDWILLTPWGLLSWPQINQQLGIAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mycobacterial PE family. PGRS subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000084 [H]

Pfam domain/function: PF00934 PE [H]

EC number: NA

Molecular weight: Translated: 45024; Mature: 45024

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSYVVALPEVMSAAATDVASIGSVVATASQGVAGATTTVLAAAEDEVSAAIAALFSGHG
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEEECHHHHHHHHHHHHCCCC
QDYQALSAQLAVFHERFVQALTGAAKGYAAAELANASLLQSEFASGIGNGFATIHQEIQR
CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
APTALAAGFTQVPPFAAAQAGIFTGTPSGAAGFDIASLWPVKPLLSLSALETHFAIPNNP
HHHHHHCCCCCCCCCHHHCCCEEECCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCC
LLALIASDIPPLSWFLGNSPPPLLNSLLGQTVQYTTYDGMSVVQITPAHPTGEYVVAIHG
EEEEEECCCCCCCHHCCCCCCHHHHHHHCCCEEEEECCCEEEEEEECCCCCCCEEEEEEC
GAFILPPSIFHWLNYSVTAYQTGATVQVPIYPLVQEGGTAGTVVPAMAGLISTQIAQHGV
CEEEECHHHHHHHCCEEEEEECCCEEEEECCCEECCCCCCCHHHHHHHHHHHHHHHHCCC
SNVSVVGDSAGGNLALAAAQYMVSQGNPVPSSMVLLSPWLDVGTWQISQAWAGNLAVNDP
CCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEHHHCCCCEEECCC
LVSPLYGSLNGLPPTYVYSGSLDPLAQQAVVLEHTAVVQGAPFSFVLAPWQIHDWILLTP
CCCHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEECEEECCEEEECC
WGLLSWPQINQQLGIAA
CCCCCCCHHHCCCCCCC
>Mature Secondary Structure
MVSYVVALPEVMSAAATDVASIGSVVATASQGVAGATTTVLAAAEDEVSAAIAALFSGHG
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEEEECHHHHHHHHHHHHCCCC
QDYQALSAQLAVFHERFVQALTGAAKGYAAAELANASLLQSEFASGIGNGFATIHQEIQR
CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
APTALAAGFTQVPPFAAAQAGIFTGTPSGAAGFDIASLWPVKPLLSLSALETHFAIPNNP
HHHHHHCCCCCCCCCHHHCCCEEECCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCCCC
LLALIASDIPPLSWFLGNSPPPLLNSLLGQTVQYTTYDGMSVVQITPAHPTGEYVVAIHG
EEEEEECCCCCCCHHCCCCCCHHHHHHHCCCEEEEECCCEEEEEEECCCCCCCEEEEEEC
GAFILPPSIFHWLNYSVTAYQTGATVQVPIYPLVQEGGTAGTVVPAMAGLISTQIAQHGV
CEEEECHHHHHHHCCEEEEEECCCEEEEECCCEECCCCCCCHHHHHHHHHHHHHHHHCCC
SNVSVVGDSAGGNLALAAAQYMVSQGNPVPSSMVLLSPWLDVGTWQISQAWAGNLAVNDP
CCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEHHHCCCCEEECCC
LVSPLYGSLNGLPPTYVYSGSLDPLAQQAVVLEHTAVVQGAPFSFVLAPWQIHDWILLTP
CCCHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCEEEEECEEECCEEEECC
WGLLSWPQINQQLGIAA
CCCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]