Definition | Mycobacterium tuberculosis F11, complete genome. |
---|---|
Accession | NC_009565 |
Length | 4,424,435 |
Click here to switch to the map view.
The map label for this gene is yieF [H]
Identifier: 148824246
GI number: 148824246
Start: 3427131
End: 3427685
Strand: Reverse
Name: yieF [H]
Synonym: TBFG_13071
Alternate gene names: 148824246
Gene position: 3427685-3427131 (Counterclockwise)
Preceding gene: 148824249
Following gene: 148824245
Centisome position: 77.47
GC content: 65.59
Gene sequence:
>555_bases GTGTCAGATACCAAGTCCGACATCAAAATCTTGGCCTTAGTGGGAAGCCTGCGCGCGGCGTCGTTCAACCGCCAGATCGC CGAGCTGGCTGCCAAGGTCGCTCCGGACGGCGTCACCGTCACCATGTTCGAGGGGCTGGGGGACCTGCCGTTCTACAACG AAGACATCGACACAGCGACGGAGGTGCCGGCGCCGGTGAGCGCGTTGCGGGAGGCCGCGTCTGACGCGCACGCTGCCTTG GTGGTCACGCCGGAATACAACGGCAGCATTCCGGCCGTGATCAAGAACGCGATCGACTGGCTGTCCAGGCCATTCGGCGA TGGCGCGTTGAAGGACAAGCCGTTGGCCGTGATCGGCGGCTCCATGGGCCGCTACGGCGGGGTATGGGCGCACGACGAGA CTCGCAAGTCGTTCAGCATCGCTGGCACGCGGGTGGTCGATGCGATCAAACTGTCGGTGCCGTTCCAAACTCTGGGCAAG TCGGTCGCGGACGACGCCGGGCTGGCGGCGAATGTGCGCGACGCCGTCGGCAACTTGGCCGCTGAGGTCGGCTGA
Upstream 100 bases:
>100_bases GCCGCTCACCTTTGCACTGTAACGCGATCGGAATAAATCGGACCATGGTCCGGTTGGCTCGTGCAAGGACGTGGACCAAC AAGCGGAAAGGAACGTAGCA
Downstream 100 bases:
>100_bases TCCCTGGGCCGAGGCGGGTCAGCCAATAGCGGCTCCATCGGCTTTGCTGGTAGCGGTTCGGCGGGAAGCTAGCGGCGACG TTGTCGGTGGCCGGTGATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MSDTKSDIKILALVGSLRAASFNRQIAELAAKVAPDGVTVTMFEGLGDLPFYNEDIDTATEVPAPVSALREAASDAHAAL VVTPEYNGSIPAVIKNAIDWLSRPFGDGALKDKPLAVIGGSMGRYGGVWAHDETRKSFSIAGTRVVDAIKLSVPFQTLGK SVADDAGLAANVRDAVGNLAAEVG
Sequences:
>Translated_184_residues MSDTKSDIKILALVGSLRAASFNRQIAELAAKVAPDGVTVTMFEGLGDLPFYNEDIDTATEVPAPVSALREAASDAHAAL VVTPEYNGSIPAVIKNAIDWLSRPFGDGALKDKPLAVIGGSMGRYGGVWAHDETRKSFSIAGTRVVDAIKLSVPFQTLGK SVADDAGLAANVRDAVGNLAAEVG >Mature_183_residues SDTKSDIKILALVGSLRAASFNRQIAELAAKVAPDGVTVTMFEGLGDLPFYNEDIDTATEVPAPVSALREAASDAHAALV VTPEYNGSIPAVIKNAIDWLSRPFGDGALKDKPLAVIGGSMGRYGGVWAHDETRKSFSIAGTRVVDAIKLSVPFQTLGKS VADDAGLAANVRDAVGNLAAEVG
Specific function: Unknown
COG id: COG0431
COG function: function code R; Predicted flavoprotein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ssuE family [H]
Homologues:
Organism=Escherichia coli, GI1790149, Length=129, Percent_Identity=39.5348837209302, Blast_Score=99, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005025 [H]
Pfam domain/function: PF03358 FMN_red [H]
EC number: NA
Molecular weight: Translated: 19095; Mature: 18964
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTKSDIKILALVGSLRAASFNRQIAELAAKVAPDGVTVTMFEGLGDLPFYNEDIDTAT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHH EVPAPVSALREAASDAHAALVVTPEYNGSIPAVIKNAIDWLSRPFGDGALKDKPLAVIGG CCCCCHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECC SMGRYGGVWAHDETRKSFSIAGTRVVDAIKLSVPFQTLGKSVADDAGLAANVRDAVGNLA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEECCHHHHHHHHHCCCCCHHHHHHHHHHHH AEVG HHCC >Mature Secondary Structure SDTKSDIKILALVGSLRAASFNRQIAELAAKVAPDGVTVTMFEGLGDLPFYNEDIDTAT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHH EVPAPVSALREAASDAHAALVVTPEYNGSIPAVIKNAIDWLSRPFGDGALKDKPLAVIGG CCCCCHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECC SMGRYGGVWAHDETRKSFSIAGTRVVDAIKLSVPFQTLGKSVADDAGLAANVRDAVGNLA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEECCHHHHHHHHHCCCCCHHHHHHHHHHHH AEVG HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]