Definition | Mycobacterium tuberculosis F11, complete genome. |
---|---|
Accession | NC_009565 |
Length | 4,424,435 |
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The map label for this gene is 148824240
Identifier: 148824240
GI number: 148824240
Start: 3421219
End: 3422793
Strand: Reverse
Name: 148824240
Synonym: TBFG_13065
Alternate gene names: NA
Gene position: 3422793-3421219 (Counterclockwise)
Preceding gene: 148824241
Following gene: 148824239
Centisome position: 77.36
GC content: 64.06
Gene sequence:
>1575_bases GTGAGCATTGCCGATACGGCTGCCAAGCCGTCCACGCCAAGCCCGGCCAACCAGCCGCCGGTACGTACCCGCGCCGTCAT CATCGGAACCGGATTCTCCGGTTTGGGCATGGCCATCGCACTGCAAAAGCAAGGAGTGGACTTCGTCATATTGGAGAAAG CCGACGACGTCGGCGGCACCTGGCGCGACAACACCTACCCCGGCTGCGCGTGCGACATCCCGTCGCACCTGTACTCCTTC TCGTTCGAGCCCAAGGCGGACTGGAAACACCTGTTTTCCTACTGGGACGAAATCTTGGGCTACCTCAAAGGGGTCACCGA CAAGTACGGCCTGCGCCGCTACATCGAGTTCAATTCGCTCGTCGATCGCGGCTACTGGGACGACGACGAATGCCGCTGGC ACGTGTTCACCGCCGACGGGCGTGAATACGTCGCGCAGTTCCTGATCTCCGGGGCCGGTGCGTTGCACATCCCGTCCTTC CCCGAGATCGCAGGTCGCGACGAATTCGCCGGCCCCGCTTTCCATTCCGCCCAGTGGGACCACAGTATCGACCTGACCGG CAAGCGGGTGGCGATCGTCGGGACCGGTGCCAGCGCGATCCAGATCGTGCCCGAGATCGTCGGCCAGGTCGCCGAACTTC AGCTCTATCAGCGCACCCCGCCGTGGGTGGTCCCGCGCACCAACGAAGAGCTGCCGGTGTCGCTGCGCCGGGCGTTGCGA ACCGTCCCCGGGCTACGGGCACTGTTGCGCCTCGGCATCTACTGGGCCCAGGAGGCGCTGGCCTACGGCATGACCAAGCG GCCCAACACGTTGAAGATCATCGAGGCCTATGCCAAATACAATATTCGTCGATCGGTGAAGGATCGCGAGCTGCGGCGCA AGCTGACGCCGCGGTATCGCATCGGCTGCAAACGGATCCTGAACTCCTCTACCTATTACCCCGCGGTGGCGGACCCGAAG ACCGAACTGATCACCGACCGCATCGACCGGATCACGCACGACGGGATCGTCACCGCCGACGGCACTGGCCGTGAGGTCTT CCGGGAAGCCGATGTGATCGTGTACGCCACCGGCTTCCACGTCACCGACTCCTATACCTATGTGCAGATCAAGGGGCGTC ACGGCGAGGACCTGGTCGACCGCTGGAACCGTGAGGGCATCGGTGCACACCGCGGGATCACCGTCGCCAACATGCCCAAC CTGTTCTTCCTGCTGGGGCCGAACACTGGGCTGGGACACAACTCCGTGGTGTTCATGATCGAATCGCAGATCCATTACGT GGCCGATGCGATCGCGAAATGCGACCGGATGGGCGTGCAAGCGCTGGCCCCCACCCGCGAGGCGCAAGACCGGTTCAACC AGGAGCTGCAGCGCAGGCTGGCTGGGTCGGTGTGGAACAGTGGCGGCTGCCGCAGCTGGTATCTCGACGAGCACGGCAAG AACACCGTGCTCTGGTGCGGCTACACCTGGCAATACTGGCTGACCACCCGCTCGGTCAACCCCGCCGAGTACCGGTTCTT CGGGATCGGCAACGGTTTGTCGAGCGACCGCGCGACGGTCGCTGCGGCGAACTAG
Upstream 100 bases:
>100_bases ACAACACTCGTCATATCCGATACCCTGGGTACTGGGTATTTGCGCCGGCGAGGGTGACTGAAGCGCCAAACTCGCCGCTG AACAGGAAGACCGATCCATT
Downstream 100 bases:
>100_bases CCGGCGAAACAGGCGAGCGGATTCGCGACACGCAAACACAACTTCTTGTGTTGCAGTACCTTGTCGGACCCCAGGGGTAG TGTTTGAGGCCTAGCAAGGC
Product: monooxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 524; Mature: 523
Protein sequence:
>524_residues MSIADTAAKPSTPSPANQPPVRTRAVIIGTGFSGLGMAIALQKQGVDFVILEKADDVGGTWRDNTYPGCACDIPSHLYSF SFEPKADWKHLFSYWDEILGYLKGVTDKYGLRRYIEFNSLVDRGYWDDDECRWHVFTADGREYVAQFLISGAGALHIPSF PEIAGRDEFAGPAFHSAQWDHSIDLTGKRVAIVGTGASAIQIVPEIVGQVAELQLYQRTPPWVVPRTNEELPVSLRRALR TVPGLRALLRLGIYWAQEALAYGMTKRPNTLKIIEAYAKYNIRRSVKDRELRRKLTPRYRIGCKRILNSSTYYPAVADPK TELITDRIDRITHDGIVTADGTGREVFREADVIVYATGFHVTDSYTYVQIKGRHGEDLVDRWNREGIGAHRGITVANMPN LFFLLGPNTGLGHNSVVFMIESQIHYVADAIAKCDRMGVQALAPTREAQDRFNQELQRRLAGSVWNSGGCRSWYLDEHGK NTVLWCGYTWQYWLTTRSVNPAEYRFFGIGNGLSSDRATVAAAN
Sequences:
>Translated_524_residues MSIADTAAKPSTPSPANQPPVRTRAVIIGTGFSGLGMAIALQKQGVDFVILEKADDVGGTWRDNTYPGCACDIPSHLYSF SFEPKADWKHLFSYWDEILGYLKGVTDKYGLRRYIEFNSLVDRGYWDDDECRWHVFTADGREYVAQFLISGAGALHIPSF PEIAGRDEFAGPAFHSAQWDHSIDLTGKRVAIVGTGASAIQIVPEIVGQVAELQLYQRTPPWVVPRTNEELPVSLRRALR TVPGLRALLRLGIYWAQEALAYGMTKRPNTLKIIEAYAKYNIRRSVKDRELRRKLTPRYRIGCKRILNSSTYYPAVADPK TELITDRIDRITHDGIVTADGTGREVFREADVIVYATGFHVTDSYTYVQIKGRHGEDLVDRWNREGIGAHRGITVANMPN LFFLLGPNTGLGHNSVVFMIESQIHYVADAIAKCDRMGVQALAPTREAQDRFNQELQRRLAGSVWNSGGCRSWYLDEHGK NTVLWCGYTWQYWLTTRSVNPAEYRFFGIGNGLSSDRATVAAAN >Mature_523_residues SIADTAAKPSTPSPANQPPVRTRAVIIGTGFSGLGMAIALQKQGVDFVILEKADDVGGTWRDNTYPGCACDIPSHLYSFS FEPKADWKHLFSYWDEILGYLKGVTDKYGLRRYIEFNSLVDRGYWDDDECRWHVFTADGREYVAQFLISGAGALHIPSFP EIAGRDEFAGPAFHSAQWDHSIDLTGKRVAIVGTGASAIQIVPEIVGQVAELQLYQRTPPWVVPRTNEELPVSLRRALRT VPGLRALLRLGIYWAQEALAYGMTKRPNTLKIIEAYAKYNIRRSVKDRELRRKLTPRYRIGCKRILNSSTYYPAVADPKT ELITDRIDRITHDGIVTADGTGREVFREADVIVYATGFHVTDSYTYVQIKGRHGEDLVDRWNREGIGAHRGITVANMPNL FFLLGPNTGLGHNSVVFMIESQIHYVADAIAKCDRMGVQALAPTREAQDRFNQELQRRLAGSVWNSGGCRSWYLDEHGKN TVLWCGYTWQYWLTTRSVNPAEYRFFGIGNGLSSDRATVAAAN
Specific function: Unknown
COG id: COG2072
COG function: function code P; Predicted flavoprotein involved in K+ transport
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FAD-binding monooxygenase family [H]
Homologues:
Organism=Homo sapiens, GI4503757, Length=366, Percent_Identity=25.9562841530055, Blast_Score=89, Evalue=8e-18, Organism=Homo sapiens, GI50541965, Length=221, Percent_Identity=26.2443438914027, Blast_Score=69, Evalue=9e-12, Organism=Homo sapiens, GI50541961, Length=221, Percent_Identity=26.2443438914027, Blast_Score=69, Evalue=9e-12, Organism=Homo sapiens, GI221316674, Length=228, Percent_Identity=27.1929824561404, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI221316672, Length=228, Percent_Identity=27.1929824561404, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI221316678, Length=228, Percent_Identity=27.1929824561404, Blast_Score=69, Evalue=1e-11, Organism=Caenorhabditis elegans, GI25145785, Length=218, Percent_Identity=26.605504587156, Blast_Score=83, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17541300, Length=220, Percent_Identity=25.4545454545455, Blast_Score=71, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020946 [H]
Pfam domain/function: PF00743 FMO-like [H]
EC number: NA
Molecular weight: Translated: 58777; Mature: 58646
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIADTAAKPSTPSPANQPPVRTRAVIIGTGFSGLGMAIALQKQGVDFVILEKADDVGGT CCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCEEEEECCCCCCCC WRDNTYPGCACDIPSHLYSFSFEPKADWKHLFSYWDEILGYLKGVTDKYGLRRYIEFNSL CCCCCCCCEEECCCHHHHEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH VDRGYWDDDECRWHVFTADGREYVAQFLISGAGALHIPSFPEIAGRDEFAGPAFHSAQWD HHCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCC HSIDLTGKRVAIVGTGASAIQIVPEIVGQVAELQLYQRTPPWVVPRTNEELPVSLRRALR CEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHEECCCCEEECCCCCCCCHHHHHHHH TVPGLRALLRLGIYWAQEALAYGMTKRPNTLKIIEAYAKYNIRRSVKDRELRRKLTPRYR HCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH IGCKRILNSSTYYPAVADPKTELITDRIDRITHDGIVTADGTGREVFREADVIVYATGFH HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHCCCEEEEEECEE VTDSYTYVQIKGRHGEDLVDRWNREGIGAHRGITVANMPNLFFLLGPNTGLGHNSVVFMI EECCEEEEEEECCCCCHHHHHCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCEEEEEE ESQIHYVADAIAKCDRMGVQALAPTREAQDRFNQELQRRLAGSVWNSGGCRSWYLDEHGK ECHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCC NTVLWCGYTWQYWLTTRSVNPAEYRFFGIGNGLSSDRATVAAAN CEEEEEECEEEEEEEECCCCCCCEEEEECCCCCCCCCCEEEECC >Mature Secondary Structure SIADTAAKPSTPSPANQPPVRTRAVIIGTGFSGLGMAIALQKQGVDFVILEKADDVGGT CCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCEEEEECCCCCCCC WRDNTYPGCACDIPSHLYSFSFEPKADWKHLFSYWDEILGYLKGVTDKYGLRRYIEFNSL CCCCCCCCEEECCCHHHHEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH VDRGYWDDDECRWHVFTADGREYVAQFLISGAGALHIPSFPEIAGRDEFAGPAFHSAQWD HHCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCC HSIDLTGKRVAIVGTGASAIQIVPEIVGQVAELQLYQRTPPWVVPRTNEELPVSLRRALR CEECCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHEECCCCEEECCCCCCCCHHHHHHHH TVPGLRALLRLGIYWAQEALAYGMTKRPNTLKIIEAYAKYNIRRSVKDRELRRKLTPRYR HCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH IGCKRILNSSTYYPAVADPKTELITDRIDRITHDGIVTADGTGREVFREADVIVYATGFH HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHCCCEEEEEECEE VTDSYTYVQIKGRHGEDLVDRWNREGIGAHRGITVANMPNLFFLLGPNTGLGHNSVVFMI EECCEEEEEEECCCCCHHHHHCCCCCCCCCCCEEEECCCCEEEEECCCCCCCCCEEEEEE ESQIHYVADAIAKCDRMGVQALAPTREAQDRFNQELQRRLAGSVWNSGGCRSWYLDEHGK ECHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCC NTVLWCGYTWQYWLTTRSVNPAEYRFFGIGNGLSSDRATVAAAN CEEEEEECEEEEEEEECCCCCCCEEEEECCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]