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The map label for this gene is ctaD [H]

Identifier: 148824234

GI number: 148824234

Start: 3414910

End: 3416631

Strand: Reverse

Name: ctaD [H]

Synonym: TBFG_13059

Alternate gene names: 148824234

Gene position: 3416631-3414910 (Counterclockwise)

Preceding gene: 148824237

Following gene: 148824233

Centisome position: 77.22

GC content: 61.27

Gene sequence:

>1722_bases
TTGACAGCCGAAGCGCCCCCGCTGGGAGAACTCGAAGCCATTCGTCCTTACCCGGCCCGCACCGGTCCCAAGGGGAGCCT
GGTCTACAAGCTGATCACCACCACCGATCACAAGATGATCGGCATCATGTACTGCGTCGCGTGCATAAGCTTTTTCTTCA
TCGGTGGCCTGCTGGCGTTGTTGATGCGGACCGAGCTGGCCGCACCCGGTCTGCAGTTCTTGTCGAATGAGCAGTTCAAC
CAGTTGTTCACCATGCACGGCACGATCATGCTGCTGTTCTATGCCACGCCGATTGTGTTTGGTTTCGCCAACCTGGTGCT
GCCGCTGCAGATCGGCGCACCCGACGTGGCCTTCCCCCGGCTGAACGCCTTTTCGTTCTGGCTGTTCGTATTTGGCGCCA
CCATCGGGGCAGCCGGCTTCATCACTCCGGGCGGGGCCGCGGACTTCGGGTGGACCGCCTACACGCCGCTGACCGACGCC
ATTCACTCGCCCGGCGCCGGGGGCGACCTGTGGATCATGGGTTTGATCGTTGCGGGTCTGGGCACGATCCTGGGCGCGGT
CAACATGATCACCACCGTGGTGTGCATGCGCGCACCCGGGATGACGATGTTCCGGATGCCGATCTTCACCTGGAACATCA
TGGTGACGTCCATCCTGATATTGATTGCGTTCCCGCTGCTCACGGCGGCATTGTTCGGGCTGGCCGCCGACCGGCATCTG
GGAGCTCACATCTATGACGCCGCCAATGGCGGAGTCCTGCTGTGGCAGCACCTGTTTTGGTTCTTCGGCCACCCCGAGGT
CTACATCATCGCGCTGCCGTTTTTCGGGATCGTCTCGGAGATCTTCCCGGTGTTTTCCCGCAAGCCGATCTTCGGTTACA
CCACGCTGGTTTATGCGACGCTGTCGATCGCCGCGTTGTCGGTCGCGGTATGGGCGCACCACATGTTCGCGACCGGAGCC
GTCCTGCTTCCCTTCTTCTCTTTCATGACGTATCTGATCGCGGTGCCGACCGGGATCAAGTTTTTCAACTGGATCGGCAC
CATGTGGAAGGGGCAATTGACCTTTGAAACCCCGATGTTGTTTTCGGTGGGCTTCATGGTCACCTTCTTGCTGGGCGGAC
TCACCGGTGTGCTGCTGGCCAGCCCGCCGCTGGACTTCCACGTCACCGATAGCTATTTCGTGGTTGCACACTTTCACTAC
GTGCTGTTCGGCACGATCGTGTTCGCCACCTTCGCCGGCATCTATTTCTGGTTCCCCAAGATGACCGGCCGGCTGCTCGA
CGAGCGGTTGGGCAAACTGCACTTCTGGTTGACGTTCATCGGTTTTCACACCACGTTCCTGGTGCAGCACTGGTTGGGCG
ACGAGGGTATGCCGCGTCGCTACGCCGACTACCTACCCACCGACGGCTTCCAGGGTCTCAACGTCGTCTCGACGATCGGG
GCCTTCATCCTGGGTGCGTCGATGTTCCCGTTCGTGTGGAACGTCTTCAAGAGCTGGCGCTACGGCGAGGTGGTCACCGT
CGACGACCCGTGGGGGTACGGGAATTCGCTGGAGTGGGCGACAAGTTGTCCGCCGCCGCGGCACAACTTCACCGAGCTGC
CTCGCATCCGCTCCGAGCGTCCCGCGTTCGAACTGCACTACCCGCATATGGTGGAACGCCTTCGCGCCGAGGCCCACGTC
GGGCGTCATCATGACGAGCCCGCCATGGTGACTTCGAGCTGA

Upstream 100 bases:

>100_bases
GGTTTGTAGGACCAGGCCTGCCGCCAGCCTGATCGAGGGCTAAGATGCCTCTCAATACTGGGTTTTGGCCCGGTCCGGGC
TGGATGTTTGGAGGAGTGCG

Downstream 100 bases:

>100_bases
TGGGGCCGTACCGGTTGGGCCCCATCTGAAGGTGAGCATGCCAGCCAAGGTGTCGGTGCTGATCACGGTCACCGGCATGG
ATCAGCCAGGCGTGACATCC

Product: cytochrome C oxidase subunit I ctaD

Products: NA

Alternate protein names: Cytochrome aa3 subunit 1; Cytochrome c oxidase polypeptide I [H]

Number of amino acids: Translated: 573; Mature: 572

Protein sequence:

>573_residues
MTAEAPPLGELEAIRPYPARTGPKGSLVYKLITTTDHKMIGIMYCVACISFFFIGGLLALLMRTELAAPGLQFLSNEQFN
QLFTMHGTIMLLFYATPIVFGFANLVLPLQIGAPDVAFPRLNAFSFWLFVFGATIGAAGFITPGGAADFGWTAYTPLTDA
IHSPGAGGDLWIMGLIVAGLGTILGAVNMITTVVCMRAPGMTMFRMPIFTWNIMVTSILILIAFPLLTAALFGLAADRHL
GAHIYDAANGGVLLWQHLFWFFGHPEVYIIALPFFGIVSEIFPVFSRKPIFGYTTLVYATLSIAALSVAVWAHHMFATGA
VLLPFFSFMTYLIAVPTGIKFFNWIGTMWKGQLTFETPMLFSVGFMVTFLLGGLTGVLLASPPLDFHVTDSYFVVAHFHY
VLFGTIVFATFAGIYFWFPKMTGRLLDERLGKLHFWLTFIGFHTTFLVQHWLGDEGMPRRYADYLPTDGFQGLNVVSTIG
AFILGASMFPFVWNVFKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSERPAFELHYPHMVERLRAEAHV
GRHHDEPAMVTSS

Sequences:

>Translated_573_residues
MTAEAPPLGELEAIRPYPARTGPKGSLVYKLITTTDHKMIGIMYCVACISFFFIGGLLALLMRTELAAPGLQFLSNEQFN
QLFTMHGTIMLLFYATPIVFGFANLVLPLQIGAPDVAFPRLNAFSFWLFVFGATIGAAGFITPGGAADFGWTAYTPLTDA
IHSPGAGGDLWIMGLIVAGLGTILGAVNMITTVVCMRAPGMTMFRMPIFTWNIMVTSILILIAFPLLTAALFGLAADRHL
GAHIYDAANGGVLLWQHLFWFFGHPEVYIIALPFFGIVSEIFPVFSRKPIFGYTTLVYATLSIAALSVAVWAHHMFATGA
VLLPFFSFMTYLIAVPTGIKFFNWIGTMWKGQLTFETPMLFSVGFMVTFLLGGLTGVLLASPPLDFHVTDSYFVVAHFHY
VLFGTIVFATFAGIYFWFPKMTGRLLDERLGKLHFWLTFIGFHTTFLVQHWLGDEGMPRRYADYLPTDGFQGLNVVSTIG
AFILGASMFPFVWNVFKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSERPAFELHYPHMVERLRAEAHV
GRHHDEPAMVTSS
>Mature_572_residues
TAEAPPLGELEAIRPYPARTGPKGSLVYKLITTTDHKMIGIMYCVACISFFFIGGLLALLMRTELAAPGLQFLSNEQFNQ
LFTMHGTIMLLFYATPIVFGFANLVLPLQIGAPDVAFPRLNAFSFWLFVFGATIGAAGFITPGGAADFGWTAYTPLTDAI
HSPGAGGDLWIMGLIVAGLGTILGAVNMITTVVCMRAPGMTMFRMPIFTWNIMVTSILILIAFPLLTAALFGLAADRHLG
AHIYDAANGGVLLWQHLFWFFGHPEVYIIALPFFGIVSEIFPVFSRKPIFGYTTLVYATLSIAALSVAVWAHHMFATGAV
LLPFFSFMTYLIAVPTGIKFFNWIGTMWKGQLTFETPMLFSVGFMVTFLLGGLTGVLLASPPLDFHVTDSYFVVAHFHYV
LFGTIVFATFAGIYFWFPKMTGRLLDERLGKLHFWLTFIGFHTTFLVQHWLGDEGMPRRYADYLPTDGFQGLNVVSTIGA
FILGASMFPFVWNVFKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSERPAFELHYPHMVERLRAEAHVG
RHHDEPAMVTSS

Specific function: Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome

COG id: COG0843

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 1

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the heme-copper respiratory oxidase family [H]

Homologues:

Organism=Homo sapiens, GI251831109, Length=513, Percent_Identity=42.6900584795322, Blast_Score=370, Evalue=1e-102,
Organism=Escherichia coli, GI1786634, Length=550, Percent_Identity=43.6363636363636, Blast_Score=414, Evalue=1e-117,
Organism=Saccharomyces cerevisiae, GI6226519, Length=538, Percent_Identity=38.6617100371747, Blast_Score=359, Evalue=1e-100,
Organism=Saccharomyces cerevisiae, GI6226524, Length=325, Percent_Identity=40, Blast_Score=231, Evalue=3e-61,
Organism=Saccharomyces cerevisiae, GI6226523, Length=251, Percent_Identity=35.4581673306773, Blast_Score=141, Evalue=3e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000883
- InterPro:   IPR014241 [H]

Pfam domain/function: PF00115 COX1 [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 63673; Mature: 63542

Theoretical pI: Translated: 6.99; Mature: 6.99

Prosite motif: PS50855 COX1 ; PS00077 COX1_CUB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAEAPPLGELEAIRPYPARTGPKGSLVYKLITTTDHKMIGIMYCVACISFFFIGGLLAL
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
LMRTELAAPGLQFLSNEQFNQLFTMHGTIMLLFYATPIVFGFANLVLPLQIGAPDVAFPR
HHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCC
LNAFSFWLFVFGATIGAAGFITPGGAADFGWTAYTPLTDAIHSPGAGGDLWIMGLIVAGL
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHH
GTILGAVNMITTVVCMRAPGMTMFRMPIFTWNIMVTSILILIAFPLLTAALFGLAADRHL
HHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GAHIYDAANGGVLLWQHLFWFFGHPEVYIIALPFFGIVSEIFPVFSRKPIFGYTTLVYAT
CCEEEECCCCCCHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHCCCCCCHHHHHHHHH
LSIAALSVAVWAHHMFATGAVLLPFFSFMTYLIAVPTGIKFFNWIGTMWKGQLTFETPML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEECCHHH
FSVGFMVTFLLGGLTGVLLASPPLDFHVTDSYFVVAHFHYVLFGTIVFATFAGIYFWFPK
HHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MTGRLLDERLGKLHFWLTFIGFHTTFLVQHWLGDEGMPRRYADYLPTDGFQGLNVVSTIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCHHHHHHH
AFILGASMFPFVWNVFKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER
HHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCC
PAFELHYPHMVERLRAEAHVGRHHDEPAMVTSS
CCEEECCHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
TAEAPPLGELEAIRPYPARTGPKGSLVYKLITTTDHKMIGIMYCVACISFFFIGGLLAL
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
LMRTELAAPGLQFLSNEQFNQLFTMHGTIMLLFYATPIVFGFANLVLPLQIGAPDVAFPR
HHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCC
LNAFSFWLFVFGATIGAAGFITPGGAADFGWTAYTPLTDAIHSPGAGGDLWIMGLIVAGL
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHH
GTILGAVNMITTVVCMRAPGMTMFRMPIFTWNIMVTSILILIAFPLLTAALFGLAADRHL
HHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GAHIYDAANGGVLLWQHLFWFFGHPEVYIIALPFFGIVSEIFPVFSRKPIFGYTTLVYAT
CCEEEECCCCCCHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHCCCCCCHHHHHHHHH
LSIAALSVAVWAHHMFATGAVLLPFFSFMTYLIAVPTGIKFFNWIGTMWKGQLTFETPML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEECCHHH
FSVGFMVTFLLGGLTGVLLASPPLDFHVTDSYFVVAHFHYVLFGTIVFATFAGIYFWFPK
HHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MTGRLLDERLGKLHFWLTFIGFHTTFLVQHWLGDEGMPRRYADYLPTDGFQGLNVVSTIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCHHHHHHH
AFILGASMFPFVWNVFKSWRYGEVVTVDDPWGYGNSLEWATSCPPPRHNFTELPRIRSER
HHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCC
PAFELHYPHMVERLRAEAHVGRHHDEPAMVTSS
CCEEECCHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]