Definition | Mycobacterium tuberculosis F11, complete genome. |
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Accession | NC_009565 |
Length | 4,424,435 |
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The map label for this gene is serB [H]
Identifier: 148824233
GI number: 148824233
Start: 3413643
End: 3414872
Strand: Reverse
Name: serB [H]
Synonym: TBFG_13058
Alternate gene names: 148824233
Gene position: 3414872-3413643 (Counterclockwise)
Preceding gene: 148824234
Following gene: 148824232
Centisome position: 77.18
GC content: 66.02
Gene sequence:
>1230_bases ATGCCAGCCAAGGTGTCGGTGCTGATCACGGTCACCGGCATGGATCAGCCAGGCGTGACATCCGCGCTCTTCGAGGTGCT CGCGCAGCACGGAGTCGAGCTGCTCAACGTCGAACAAGTGGTGATCCGGGGCCGGCTCACGCTGGGTGTGCTGGTGTCGT GCCCGCTGGACGTTGCCGACGGTACCGCGCTGCGCGACGACGTCGCGGCCGCCATCCACGGGGTGGGTCTAGACGTCGCC ATCGAGCGCAGCGACGATCTGCCAATCATTCGGCAACCGTCCACCCACACCATTTTCGTGCTGGGACGCCCGATTACCGC CGGAGCGTTCAGCGCGGTGGCCAGGGAAGTGGCCGCACTCGGCGTCAACATCGACTTCATCCGCGGCATTTCCGACTACC CGGTCACCGGCCTGGAGTTGCGGGTCTCGGTGCCGCCTGGATGCGTGGGTCCGCTGCAGATCGCCCTGACCAAGGTGGCC GCCGAAGAGCATGTCGATGTGGCCGTCGAGGACTACGGCTTGGCTTGGCGCACCAAACGCCTGATCGTCTTCGACGTCGA CTCCACTCTGGTCCAAGGCGAGGTCATCGAGATGCTGGCAGCCCGTGCGGGTGCCCAGGGACAGGTCGCCGCGATCACCG AGGCCGCGATGCGTGGTGAGCTGGACTTCGCCGAGTCGCTGCAGCGTCGTGTTGCCACCTTGGCGGGGCTGCCCGCGACG GTGATAGACGACGTCGCCGAGCAGCTCGAACTGATGCCCGGTGCTCGGACCACGATCCGGACCTTGCGGCGTCTGGGTTT TCGCTGCGGTGTGGTTTCCGGCGGCTTTCGGCGGATCATCGAGCCGCTCGCACGCGAGTTGATGTTGGATTTCGTTGCGT CCAACGAGCTGGAAATCGTCGATGGCATTCTTACCGGCCGGGTCGTGGGGCCGATTGTTGACCGGCCCGGCAAGGCCAAG GCGCTTCGGGACTTCGCGAGCCAGTATGGGGTGCCGATGGAGCAGACCGTCGCGGTCGGCGACGGCGCCAACGATATCGA CATGCTGGGCGCGGCCGGGCTGGGAATAGCATTCAACGCCAAGCCGGCGTTGCGTGAGGTCGCCGATGCGTCGTTGAGCC ATCCGTACCTGGACACGGTGTTGTTCTTGTTGGGCGTGACTCGCGGTGAGATCGAGGCCGCCGACGCCGGCGACTGTGGG GTGCGTCGCGTGGAAATCCCGGCCGACTAG
Upstream 100 bases:
>100_bases CTTCGCGCCGAGGCCCACGTCGGGCGTCATCATGACGAGCCCGCCATGGTGACTTCGAGCTGATGGGGCCGTACCGGTTG GGCCCCATCTGAAGGTGAGC
Downstream 100 bases:
>100_bases GTTGCTCGCGGAGCATGCGGCACGATAGTCGGGTGCTCGACAACGGCGGCCCTGATGCGGCTGACCCCGACCTGCTGATC GACTTCCGAAACGTGTCCCT
Product: phosphoserine phosphatase
Products: NA
Alternate protein names: PSP; PSPase; O-phosphoserine phosphohydrolase [H]
Number of amino acids: Translated: 409; Mature: 408
Protein sequence:
>409_residues MPAKVSVLITVTGMDQPGVTSALFEVLAQHGVELLNVEQVVIRGRLTLGVLVSCPLDVADGTALRDDVAAAIHGVGLDVA IERSDDLPIIRQPSTHTIFVLGRPITAGAFSAVAREVAALGVNIDFIRGISDYPVTGLELRVSVPPGCVGPLQIALTKVA AEEHVDVAVEDYGLAWRTKRLIVFDVDSTLVQGEVIEMLAARAGAQGQVAAITEAAMRGELDFAESLQRRVATLAGLPAT VIDDVAEQLELMPGARTTIRTLRRLGFRCGVVSGGFRRIIEPLARELMLDFVASNELEIVDGILTGRVVGPIVDRPGKAK ALRDFASQYGVPMEQTVAVGDGANDIDMLGAAGLGIAFNAKPALREVADASLSHPYLDTVLFLLGVTRGEIEAADAGDCG VRRVEIPAD
Sequences:
>Translated_409_residues MPAKVSVLITVTGMDQPGVTSALFEVLAQHGVELLNVEQVVIRGRLTLGVLVSCPLDVADGTALRDDVAAAIHGVGLDVA IERSDDLPIIRQPSTHTIFVLGRPITAGAFSAVAREVAALGVNIDFIRGISDYPVTGLELRVSVPPGCVGPLQIALTKVA AEEHVDVAVEDYGLAWRTKRLIVFDVDSTLVQGEVIEMLAARAGAQGQVAAITEAAMRGELDFAESLQRRVATLAGLPAT VIDDVAEQLELMPGARTTIRTLRRLGFRCGVVSGGFRRIIEPLARELMLDFVASNELEIVDGILTGRVVGPIVDRPGKAK ALRDFASQYGVPMEQTVAVGDGANDIDMLGAAGLGIAFNAKPALREVADASLSHPYLDTVLFLLGVTRGEIEAADAGDCG VRRVEIPAD >Mature_408_residues PAKVSVLITVTGMDQPGVTSALFEVLAQHGVELLNVEQVVIRGRLTLGVLVSCPLDVADGTALRDDVAAAIHGVGLDVAI ERSDDLPIIRQPSTHTIFVLGRPITAGAFSAVAREVAALGVNIDFIRGISDYPVTGLELRVSVPPGCVGPLQIALTKVAA EEHVDVAVEDYGLAWRTKRLIVFDVDSTLVQGEVIEMLAARAGAQGQVAAITEAAMRGELDFAESLQRRVATLAGLPATV IDDVAEQLELMPGARTTIRTLRRLGFRCGVVSGGFRRIIEPLARELMLDFVASNELEIVDGILTGRVVGPIVDRPGKAKA LRDFASQYGVPMEQTVAVGDGANDIDMLGAAGLGIAFNAKPALREVADASLSHPYLDTVLFLLGVTRGEIEAADAGDCGV RRVEIPAD
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serB family [H]
Homologues:
Organism=Homo sapiens, GI46249388, Length=212, Percent_Identity=28.7735849056604, Blast_Score=72, Evalue=7e-13, Organism=Escherichia coli, GI1790849, Length=235, Percent_Identity=46.8085106382979, Blast_Score=189, Evalue=4e-49, Organism=Saccharomyces cerevisiae, GI6321647, Length=299, Percent_Identity=36.4548494983278, Blast_Score=179, Evalue=8e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006383 - InterPro: IPR023190 - InterPro: IPR004469 [H]
Pfam domain/function: PF01842 ACT; PF00702 Hydrolase [H]
EC number: =3.1.3.3 [H]
Molecular weight: Translated: 43131; Mature: 43000
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAKVSVLITVTGMDQPGVTSALFEVLAQHGVELLNVEQVVIRGRLTLGVLVSCPLDVAD CCCEEEEEEEEECCCCCCHHHHHHHHHHHCCCEEECHHHHHHHCCCEEEEEEECCCCCCC GTALRDDVAAAIHGVGLDVAIERSDDLPIIRQPSTHTIFVLGRPITAGAFSAVAREVAAL CCHHHHHHHHHHHCCCEEEEEECCCCCCEEECCCCCEEEEEECCCCHHHHHHHHHHHHHH GVNIDFIRGISDYPVTGLELRVSVPPGCVGPLQIALTKVAAEEHVDVAVEDYGLAWRTKR CCCHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCEEEEECCCCEEEECE LIVFDVDSTLVQGEVIEMLAARAGAQGQVAAITEAAMRGELDFAESLQRRVATLAGLPAT EEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHH VIDDVAEQLELMPGARTTIRTLRRLGFRCGVVSGGFRRIIEPLARELMLDFVASNELEIV HHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHH DGILTGRVVGPIVDRPGKAKALRDFASQYGVPMEQTVAVGDGANDIDMLGAAGLGIAFNA HHHHHCCHHHHHHCCCCHHHHHHHHHHHHCCCHHHEEEECCCCCCHHHHCCCCCCEEECC KPALREVADASLSHPYLDTVLFLLGVTRGEIEAADAGDCGVRRVEIPAD CHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEECCCCCCCCCEEEECCCC >Mature Secondary Structure PAKVSVLITVTGMDQPGVTSALFEVLAQHGVELLNVEQVVIRGRLTLGVLVSCPLDVAD CCEEEEEEEEECCCCCCHHHHHHHHHHHCCCEEECHHHHHHHCCCEEEEEEECCCCCCC GTALRDDVAAAIHGVGLDVAIERSDDLPIIRQPSTHTIFVLGRPITAGAFSAVAREVAAL CCHHHHHHHHHHHCCCEEEEEECCCCCCEEECCCCCEEEEEECCCCHHHHHHHHHHHHHH GVNIDFIRGISDYPVTGLELRVSVPPGCVGPLQIALTKVAAEEHVDVAVEDYGLAWRTKR CCCHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCEEEEECCCCEEEECE LIVFDVDSTLVQGEVIEMLAARAGAQGQVAAITEAAMRGELDFAESLQRRVATLAGLPAT EEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHH VIDDVAEQLELMPGARTTIRTLRRLGFRCGVVSGGFRRIIEPLARELMLDFVASNELEIV HHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHH DGILTGRVVGPIVDRPGKAKALRDFASQYGVPMEQTVAVGDGANDIDMLGAAGLGIAFNA HHHHHCCHHHHHHCCCCHHHHHHHHHHHHCCCHHHEEEECCCCCCHHHHCCCCCCEEECC KPALREVADASLSHPYLDTVLFLLGVTRGEIEAADAGDCGVRRVEIPAD CHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEECCCCCCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA