Definition | Mycobacterium tuberculosis F11, complete genome. |
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Accession | NC_009565 |
Length | 4,424,435 |
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The map label for this gene is 148824231
Identifier: 148824231
GI number: 148824231
Start: 3411902
End: 3412768
Strand: Reverse
Name: 148824231
Synonym: TBFG_13056
Alternate gene names: NA
Gene position: 3412768-3411902 (Counterclockwise)
Preceding gene: 148824232
Following gene: 148824230
Centisome position: 77.13
GC content: 68.28
Gene sequence:
>867_bases ATGAATTCACCTCGCGAGCCACTGGTACCCCCGCCTACACCGAGGCCGGCGGCGACCGTGATGTTGGTCCGCGACCCGGA CGCCGGATCAGCGTCCGGTCTGGCCGTCTTCTTGATGCGGCGGCACGCTGCGATGGATTTCGCCGCCGGGGTAATGGTGT TTCCCGGCGGGGGAGTCGACGACCGCGACCGCGACGCCGACTTGGGCCGGCTGGGGGCATGGGCCGGTCCGCCGCCGCAG TGGTGGGCGCAGCGGTTCGGCATCGAGCCTGATCTCGCCGAAGCCTTGGTCTGCGCGGCGGCCCGCGAGACGTTCGAGGA GTCGGGGGTGCTATTCGCCGGGCCGGTCGATCAGGACCATTCGGCACCGAACAGCATCGTCTCGGATGCCTCGGTGTACG GCGACGCGCGTCGCGCACTGGCCGACCGGACGCTGTCCTTCGCGGACTTCCTGCAGCGGGAAAAGCTGGTGCTGCGATCC GACCTGCTACGGCCCTGGGCCAACTGGGTCACCCCGGAGGCCGAACTGACCCGGCGCTACGACACCTACTTCTTTGTGGG TGCCCTACCTGAAGGTCAGCGCGCCGACGGCGAGAACACCGAATCCGACCGGGCTGGTTGGGTGTTGCCAGCCGACGCTA TCGCCGACTTCGCCGCCGGCCGCAACTTCTTGCTGCCGCCGACCTGGACGCAACTGGACTCGCTGGCCGGTCATACCGTT GCCGACGTGCTGGCCGTCGAACGCCAAATCGTCCCGGTGCAGCCACAGCTGGCCCGCAACGGCGACAACTGGGAGATCGA GTTCTTCGATTCCGACCGCTATAACCAGGCCCGGAGATCGGGCGGATCGACCGGGTGGCCGCTGTGA
Upstream 100 bases:
>100_bases ACCTGTCCACCGCGTTTGGCCAGGAGATCACGCTGGAGGTGGCCGACGGGCGATATTTCGCCCGACGGCGTCGCAGCCGA GCAGCCCATCGGAGACAGTC
Downstream 100 bases:
>100_bases CGCCAACGGTGCCCGAGTTCGTCAACGTCGTGGTCAGTGACGGCTCCCAGGATGCCGGCCTGGCCATGTTGCTCCTATCG CGACCGCCTACCAACGCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NUDIX Family Hydrolase; Beta-Lactamase Domain-Containing Protein; NUDIX Family Protein; Beta-Lactamase-Like; NUDIX Domain-Containing Protein; NTP Pyrophosphohydrolase Including Oxidative Damage Repair; NUDIX Protein; Phosphohydrolase; Beta-Lactamase Domain Protein; NUDIX/MutT Family Hydrolase; Nudix Hydrolase; Hydrolase; Nudix Superfamily Hydrolase
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MNSPREPLVPPPTPRPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVDDRDRDADLGRLGAWAGPPPQ WWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDHSAPNSIVSDASVYGDARRALADRTLSFADFLQREKLVLRS DLLRPWANWVTPEAELTRRYDTYFFVGALPEGQRADGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAGHTV ADVLAVERQIVPVQPQLARNGDNWEIEFFDSDRYNQARRSGGSTGWPL
Sequences:
>Translated_288_residues MNSPREPLVPPPTPRPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVDDRDRDADLGRLGAWAGPPPQ WWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDHSAPNSIVSDASVYGDARRALADRTLSFADFLQREKLVLRS DLLRPWANWVTPEAELTRRYDTYFFVGALPEGQRADGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAGHTV ADVLAVERQIVPVQPQLARNGDNWEIEFFDSDRYNQARRSGGSTGWPL >Mature_288_residues MNSPREPLVPPPTPRPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVDDRDRDADLGRLGAWAGPPPQ WWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDHSAPNSIVSDASVYGDARRALADRTLSFADFLQREKLVLRS DLLRPWANWVTPEAELTRRYDTYFFVGALPEGQRADGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAGHTV ADVLAVERQIVPVQPQLARNGDNWEIEFFDSDRYNQARRSGGSTGWPL
Specific function: Unknown
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31485; Mature: 31485
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSPREPLVPPPTPRPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVD CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCC DRDRDADLGRLGAWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDH CCCCCCCHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCC SAPNSIVSDASVYGDARRALADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH DTYFFVGALPEGQRADGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAGHTV CCEEEEECCCCCCCCCCCCCCCCCCCEEECHHHHHHHHCCCCCCCCCCHHHHHHHCCHHH ADVLAVERQIVPVQPQLARNGDNWEIEFFDSDRYNQARRSGGSTGWPL HHHHHHHHHCCCCCHHHHCCCCCEEEEEECCCCHHHHHHCCCCCCCCC >Mature Secondary Structure MNSPREPLVPPPTPRPAATVMLVRDPDAGSASGLAVFLMRRHAAMDFAAGVMVFPGGGVD CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCC DRDRDADLGRLGAWAGPPPQWWAQRFGIEPDLAEALVCAAARETFEESGVLFAGPVDQDH CCCCCCCHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCC SAPNSIVSDASVYGDARRALADRTLSFADFLQREKLVLRSDLLRPWANWVTPEAELTRRY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH DTYFFVGALPEGQRADGENTESDRAGWVLPADAIADFAAGRNFLLPPTWTQLDSLAGHTV CCEEEEECCCCCCCCCCCCCCCCCCCEEECHHHHHHHHCCCCCCCCCCHHHHHHHCCHHH ADVLAVERQIVPVQPQLARNGDNWEIEFFDSDRYNQARRSGGSTGWPL HHHHHHHHHCCCCCHHHHCCCCCEEEEEECCCCHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA