Click here to switch to the map view.

The map label for this gene is gatC

Identifier: 148824202

GI number: 148824202

Start: 3383140

End: 3383439

Strand: Reverse

Name: gatC

Synonym: TBFG_13027

Alternate gene names: 148824202

Gene position: 3383439-3383140 (Counterclockwise)

Preceding gene: 148824204

Following gene: 148824201

Centisome position: 76.47

GC content: 67.33

Gene sequence:

>300_bases
GTGTCCCAGATCTCCCGCGACGAGGTTGCCCACCTCGCCAGGCTTGCCCGGCTGGCATTGACCGAAACCGAGCTGGACAG
TTTCGCCGGCCAACTCGACGCCATCCTGACCCACGTCAGCCAGATCCAGGCCGTCGACGTCACCGGTGTGCAGGCCACCG
ACAATCCGCTCAAGGACGTCAACGTCACCCGCCCGGACGAGACCGTGCCGTGCCTGACCCAGCGTCAGGTGCTCGACCAG
GCGCCCGATGCCGTCGACGGCCGCTTCGCCGTCCCGCAGATCCTGGGGGATGAACAGTGA

Upstream 100 bases:

>100_bases
ATAGATACGAACGCACGGCCAACACTGTGGCACAACGATGTATCCACGGCGTTTCGGCAGCCGGCGTCGGCCGTCCGGCC
ACCCATTAGGCTTTGCGGTC

Downstream 100 bases:

>100_bases
CGGACATCATCCGATCCGACGCCGCGACGCTGGCCGCCAAGATCGCCATCAAGGAGGTGTCGTCGGCCGAGATCACCCGG
GCCTGCCTGGATCAGATCGA

Product: aspartyl/glutamyl-tRNA amidotransferase subunit C

Products: NA

Alternate protein names: Glu-ADT subunit C

Number of amino acids: Translated: 99; Mature: 98

Protein sequence:

>99_residues
MSQISRDEVAHLARLARLALTETELDSFAGQLDAILTHVSQIQAVDVTGVQATDNPLKDVNVTRPDETVPCLTQRQVLDQ
APDAVDGRFAVPQILGDEQ

Sequences:

>Translated_99_residues
MSQISRDEVAHLARLARLALTETELDSFAGQLDAILTHVSQIQAVDVTGVQATDNPLKDVNVTRPDETVPCLTQRQVLDQ
APDAVDGRFAVPQILGDEQ
>Mature_98_residues
SQISRDEVAHLARLARLALTETELDSFAGQLDAILTHVSQIQAVDVTGVQATDNPLKDVNVTRPDETVPCLTQRQVLDQA
PDAVDGRFAVPQILGDEQ

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GATC_MYCBO (P64206)

Other databases:

- EMBL:   BX248344
- RefSeq:   NP_856682.1
- ProteinModelPortal:   P64206
- SMR:   P64206
- EnsemblBacteria:   EBMYCT00000016465
- GeneID:   1093590
- GenomeReviews:   BX248333_GR
- KEGG:   mbo:Mb3037c
- GeneTree:   EBGT00050000017278
- HOGENOM:   HBG586403
- OMA:   PTSHAVP
- ProtClustDB:   PRK00034
- BioCyc:   MBOV233413:MB3037C-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00122
- InterPro:   IPR003837
- TIGRFAMs:   TIGR00135

Pfam domain/function: PF02686 Glu-tRNAGln

EC number: 6.3.5.-

Molecular weight: Translated: 10748; Mature: 10617

Theoretical pI: Translated: 4.10; Mature: 4.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQISRDEVAHLARLARLALTETELDSFAGQLDAILTHVSQIQAVDVTGVQATDNPLKDV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
NVTRPDETVPCLTQRQVLDQAPDAVDGRFAVPQILGDEQ
CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHCCCCC
>Mature Secondary Structure 
SQISRDEVAHLARLARLALTETELDSFAGQLDAILTHVSQIQAVDVTGVQATDNPLKDV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
NVTRPDETVPCLTQRQVLDQAPDAVDGRFAVPQILGDEQ
CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972