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The map label for this gene is rutF [H]

Identifier: 148824197

GI number: 148824197

Start: 3377545

End: 3378159

Strand: Reverse

Name: rutF [H]

Synonym: TBFG_13022

Alternate gene names: 148824197

Gene position: 3378159-3377545 (Counterclockwise)

Preceding gene: 148824199

Following gene: 148824195

Centisome position: 76.35

GC content: 62.44

Gene sequence:

>615_bases
GTGTCAGAAGACGTTGCGCGGATTCATGATGGTGATGTGATCGATGAGTCGTTCGACGAGTTGATGGGGATGCTGGACCA
CCCGGTGTTTGTGGTGACAACCCAGGCCGATGGTCACCCCGCGGGTTGTCTGGTCAGCTTCGCTACCCAAACGAGCGTGC
AGCCCCCGAGTTTTATGGTCGGCCTGCCGAGGAGCACCGGCACCTCCGAGGTGGCGAGCCGATCCGAGCACCTCGCCGTG
CACGTGCTTTCGCAGCGGCAGCATGTGCTCGCCGAACTGTTCGGCAGCCAAACGGAGGAGGAGGTCAACAAGTTCGCCCG
TTGCTCGTGGCGCGCTGGCCCCTGTGGAATGCCGATTCTCGACGACGCGGCCGCCTGGTTCATCGGTAGGACGGCCAGTC
GCAGCGATGTCGGGGATTATGTGGCTTACCTGTTGGAGCCCGTGAGCGTGTGGGCTCCGGAGTGCTCGGAAGATCTGCTC
TACCTCTCCGACCTCGACTTTGATGTCGACGACATCGACCCTGGCAAGGAAGCCTCACCCCGGTTCTACGAGCGTGAACG
GGGCGACGAGACACGCCGATACGGCGTCGTAAGGTTCACGCTCGACGTGCCCTAA

Upstream 100 bases:

>100_bases
TTCCGTGCCCAGATCGTCGCCGATTTGGGGCCGTGACGGCGGCCTCACCGGTCGACGTGATGGCGGTAGCGGCGATTCGC
CGACTGAACGCTCGGAAAGA

Downstream 100 bases:

>100_bases
CCGGGTCAGGTCTTGTCGTCGTTGTTGCGCGGGAAGCCGCCACCCTGCGGGAACAGCGGGAACACCACATCGTCGAGCTT
CTCGGCGTCGCCGGCGGTCT

Product: oxidoreductase

Products: NA

Alternate protein names: FMN reductase; NAD(P)H:flavin oxidoreductase [H]

Number of amino acids: Translated: 204; Mature: 203

Protein sequence:

>204_residues
MSEDVARIHDGDVIDESFDELMGMLDHPVFVVTTQADGHPAGCLVSFATQTSVQPPSFMVGLPRSTGTSEVASRSEHLAV
HVLSQRQHVLAELFGSQTEEEVNKFARCSWRAGPCGMPILDDAAAWFIGRTASRSDVGDYVAYLLEPVSVWAPECSEDLL
YLSDLDFDVDDIDPGKEASPRFYERERGDETRRYGVVRFTLDVP

Sequences:

>Translated_204_residues
MSEDVARIHDGDVIDESFDELMGMLDHPVFVVTTQADGHPAGCLVSFATQTSVQPPSFMVGLPRSTGTSEVASRSEHLAV
HVLSQRQHVLAELFGSQTEEEVNKFARCSWRAGPCGMPILDDAAAWFIGRTASRSDVGDYVAYLLEPVSVWAPECSEDLL
YLSDLDFDVDDIDPGKEASPRFYERERGDETRRYGVVRFTLDVP
>Mature_203_residues
SEDVARIHDGDVIDESFDELMGMLDHPVFVVTTQADGHPAGCLVSFATQTSVQPPSFMVGLPRSTGTSEVASRSEHLAVH
VLSQRQHVLAELFGSQTEEEVNKFARCSWRAGPCGMPILDDAAAWFIGRTASRSDVGDYVAYLLEPVSVWAPECSEDLLY
LSDLDFDVDDIDPGKEASPRFYERERGDETRRYGVVRFTLDVP

Specific function: Catalyzes the reduction of FMN to FMNH2 which is used to reduce pyrimidine by RutA via the Rut pathway [H]

COG id: COG1853

COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the non-flavoprotein flavin reductase family. RutF subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002563
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01613 Flavin_Reduct [H]

EC number: =1.5.1.29 [H]

Molecular weight: Translated: 22587; Mature: 22456

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEDVARIHDGDVIDESFDELMGMLDHPVFVVTTQADGHPAGCLVSFATQTSVQPPSFMV
CCCCHHHHCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHEEEEHHCCCCCCCCEEE
GLPRSTGTSEVASRSEHLAVHVLSQRQHVLAELFGSQTEEEVNKFARCSWRAGPCGMPIL
ECCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHH
DDAAAWFIGRTASRSDVGDYVAYLLEPVSVWAPECSEDLLYLSDLDFDVDDIDPGKEASP
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
RFYERERGDETRRYGVVRFTLDVP
CHHHHHCCCCHHHEEEEEEEEECC
>Mature Secondary Structure 
SEDVARIHDGDVIDESFDELMGMLDHPVFVVTTQADGHPAGCLVSFATQTSVQPPSFMV
CCCHHHHCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHEEEEHHCCCCCCCCEEE
GLPRSTGTSEVASRSEHLAVHVLSQRQHVLAELFGSQTEEEVNKFARCSWRAGPCGMPIL
ECCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHH
DDAAAWFIGRTASRSDVGDYVAYLLEPVSVWAPECSEDLLYLSDLDFDVDDIDPGKEASP
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
RFYERERGDETRRYGVVRFTLDVP
CHHHHHCCCCHHHEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12597275 [H]