Definition | Mycobacterium tuberculosis F11, complete genome. |
---|---|
Accession | NC_009565 |
Length | 4,424,435 |
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The map label for this gene is 148824106
Identifier: 148824106
GI number: 148824106
Start: 3237892
End: 3239772
Strand: Direct
Name: 148824106
Synonym: TBFG_12931
Alternate gene names: NA
Gene position: 3237892-3239772 (Clockwise)
Preceding gene: 148824100
Following gene: 148824118
Centisome position: 73.18
GC content: 67.46
Gene sequence:
>1881_bases GTGCGAGTAACCCGCCTGGTGGACGCAGAGTCAACACGATGCGACGTCGGACCTGCGCCGAAAAGCGTTGCCATGCTACA TTTCACCGCCGCCACCTCACGGTTCCGGCTGGGGAGGGAGCGGGCAAATTCGGTCCGTAGCGACGGGGGGTGGGGAGTCT TGCAGCCGGTCAGCGCGACCTTCAACCCTCCGTTGCGGGGTTGGCAGCGCCGGGCGCTGGTGCAGTACCTGGGCACCCAG CCGCGGGATTTCCTCGCGGTGGCCACTCCCGGATCTGGCAAGACATCGTTCGCGCTGCGGATCGCAGCCGAACTACTCCG TTACCACACTGTCGAGCAGGTCACCGTCGTCGTGCCCACAGAGCACCTCAAGGTGCAGTGGGCGCATGCTGCGGCAGCAC ACGGCCTTTCCCTTGACCCAAAGTTCGCCAACTCCAATCCGCAGACCTCACCGGAGTATCACGGCGTAATGGTCACCTAC GCCCAGGTCGCTTCGCATCCCACGCTGCACCGAGTGCGTACCGAAGCGCGCAAGACGTTGGTGGTCTTCGACGAGATCCA CCACGGCGGCGACGCCAAGACCTGGGGAGACGCCATCCGGGAAGCTTTCGGTGACGCCACCCGCCGCCTTGCCCTGACGG GTACACCGTTTCGCAGCGACGACAGCCCAATCCCGTTCGTCAGCTACCAGCCCGACGCGGATGGCGTGCTGCGTTCTCAG GCTGACCACACCTACGGCTATGCGGAAGCCCTCGCTGACGGTGTCGTCCGGCCGGTGGTCTTCCTCGCCTATTCGGGGCA GGCGCGCTGGCGGGACAGCGCCGGCGAGGAGTACGAGGCGCGACTGGGCGAGCCGCTGTCTGCCGAGCAGACCGCGCGGG CGTGGCGCACAGCGCTCGACCCGGAAGGCGAGTGGATGCCGGCGGTGATCACGGCGGCCGATCGACGGCTCCGACAACTG CGTGCGCACGTACCCGACGCGGGCGGCATGATCATCGCCTCGGATCGCACCACGGCCCGCGCTTATGCCCGCCTGCTCAC CACGATGACGGCCGAAGAGCCCACGGTCGTGCTCTCCGACGACCCCGGATCGTCGGCGCGTATCACGGAATTTGCCCAGG GCACCAGCCGTTGGCTGGTCGCGGTCCGCATGGTCTCCGAAGGTGTCGACGTGCCCCGGCTTTCGGTCGGGGTTTACGCC ACCAACGCCTCCACGCCGCTGTTCTTCGCACAGGCCATCGGTCGGTTCGTGAGGTCCCGCCGACCGGGTGAAACCGCGAG CATCTTCGTGCCGTCGGTGCCTAACCTGCTGCAGCTGGCCAGTGCGTTGGAGGTGCAGCGTAACCACGTGCTGGGCCGAC CGCACCGCGAATCGGCCCACGATCCCCTCGATGGTGATCCCGCCACCAGGACGCAAACCGAGCGGGGCGGCGCGGAGCGG GGCTTTACCGCGTTGGGGGCCGATGCGGAACTCGATCAGGTCATCTTCGACGGTTCCTCGTTCGGCACCGCCACCCCAAC CGGGAGCGACGAGGAGGCCGACTACCTAGGCATCCCCGGGCTGCTCGATGCCGAGCAGATGCGCGCCCTGCTGCACCGCC GCCAAGACGAGCAGCTGAGGAAACGGGCTCAGCTTCAGAAAGGGGCCACCCAGCCAGCAACGTCGGGGGCTTCGGCATCG GTGCATGGCCAACTGCGCGACCTGCGCCGCGAGCTCCACACGCTGGTGTCGATTGCGCACCACCGCACCGGCAAACCGCA TGGCTGGATCCACGACGAACTGCGCCGCCGTTGTGGCGGGCCTCCGATCGCCGCTGCCACCCGCGCTCAGATCAAGGCAC GCATCGATGCGTTGCGACAGCTCAACTCCGAGCGGTCATGA
Upstream 100 bases:
>100_bases CGGTCAGACAGCGATTCAAACACGCCCGCCAGCCTAATGGTGATCGCGAGCGCCGCGCAGCGGCACCGTTATCCGTTGAC TCTGCGTCCACCACGCAAAA
Downstream 100 bases:
>100_bases GCGTGCGATCCTAATCGCCGACGGGTTCGTCGACCACAACGTCGACGCTGGCGCCCAACACCTCCAGCAGGTGTTGCTCG ACCGCGGCTCTCGCGTCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 626; Mature: 626
Protein sequence:
>626_residues MRVTRLVDAESTRCDVGPAPKSVAMLHFTAATSRFRLGRERANSVRSDGGWGVLQPVSATFNPPLRGWQRRALVQYLGTQ PRDFLAVATPGSGKTSFALRIAAELLRYHTVEQVTVVVPTEHLKVQWAHAAAAHGLSLDPKFANSNPQTSPEYHGVMVTY AQVASHPTLHRVRTEARKTLVVFDEIHHGGDAKTWGDAIREAFGDATRRLALTGTPFRSDDSPIPFVSYQPDADGVLRSQ ADHTYGYAEALADGVVRPVVFLAYSGQARWRDSAGEEYEARLGEPLSAEQTARAWRTALDPEGEWMPAVITAADRRLRQL RAHVPDAGGMIIASDRTTARAYARLLTTMTAEEPTVVLSDDPGSSARITEFAQGTSRWLVAVRMVSEGVDVPRLSVGVYA TNASTPLFFAQAIGRFVRSRRPGETASIFVPSVPNLLQLASALEVQRNHVLGRPHRESAHDPLDGDPATRTQTERGGAER GFTALGADAELDQVIFDGSSFGTATPTGSDEEADYLGIPGLLDAEQMRALLHRRQDEQLRKRAQLQKGATQPATSGASAS VHGQLRDLRRELHTLVSIAHHRTGKPHGWIHDELRRRCGGPPIAAATRAQIKARIDALRQLNSERS
Sequences:
>Translated_626_residues MRVTRLVDAESTRCDVGPAPKSVAMLHFTAATSRFRLGRERANSVRSDGGWGVLQPVSATFNPPLRGWQRRALVQYLGTQ PRDFLAVATPGSGKTSFALRIAAELLRYHTVEQVTVVVPTEHLKVQWAHAAAAHGLSLDPKFANSNPQTSPEYHGVMVTY AQVASHPTLHRVRTEARKTLVVFDEIHHGGDAKTWGDAIREAFGDATRRLALTGTPFRSDDSPIPFVSYQPDADGVLRSQ ADHTYGYAEALADGVVRPVVFLAYSGQARWRDSAGEEYEARLGEPLSAEQTARAWRTALDPEGEWMPAVITAADRRLRQL RAHVPDAGGMIIASDRTTARAYARLLTTMTAEEPTVVLSDDPGSSARITEFAQGTSRWLVAVRMVSEGVDVPRLSVGVYA TNASTPLFFAQAIGRFVRSRRPGETASIFVPSVPNLLQLASALEVQRNHVLGRPHRESAHDPLDGDPATRTQTERGGAER GFTALGADAELDQVIFDGSSFGTATPTGSDEEADYLGIPGLLDAEQMRALLHRRQDEQLRKRAQLQKGATQPATSGASAS VHGQLRDLRRELHTLVSIAHHRTGKPHGWIHDELRRRCGGPPIAAATRAQIKARIDALRQLNSERS >Mature_626_residues MRVTRLVDAESTRCDVGPAPKSVAMLHFTAATSRFRLGRERANSVRSDGGWGVLQPVSATFNPPLRGWQRRALVQYLGTQ PRDFLAVATPGSGKTSFALRIAAELLRYHTVEQVTVVVPTEHLKVQWAHAAAAHGLSLDPKFANSNPQTSPEYHGVMVTY AQVASHPTLHRVRTEARKTLVVFDEIHHGGDAKTWGDAIREAFGDATRRLALTGTPFRSDDSPIPFVSYQPDADGVLRSQ ADHTYGYAEALADGVVRPVVFLAYSGQARWRDSAGEEYEARLGEPLSAEQTARAWRTALDPEGEWMPAVITAADRRLRQL RAHVPDAGGMIIASDRTTARAYARLLTTMTAEEPTVVLSDDPGSSARITEFAQGTSRWLVAVRMVSEGVDVPRLSVGVYA TNASTPLFFAQAIGRFVRSRRPGETASIFVPSVPNLLQLASALEVQRNHVLGRPHRESAHDPLDGDPATRTQTERGGAER GFTALGADAELDQVIFDGSSFGTATPTGSDEEADYLGIPGLLDAEQMRALLHRRQDEQLRKRAQLQKGATQPATSGASAS VHGQLRDLRRELHTLVSIAHHRTGKPHGWIHDELRRRCGGPPIAAATRAQIKARIDALRQLNSERS
Specific function: Unknown
COG id: COG1061
COG function: function code KL; DNA or RNA helicases of superfamily II
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.leprae ML1624 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR014001 - InterPro: IPR014021 - InterPro: IPR006935 [H]
Pfam domain/function: PF04851 ResIII [H]
EC number: NA
Molecular weight: Translated: 68323; Mature: 68323
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVTRLVDAESTRCDVGPAPKSVAMLHFTAATSRFRLGRERANSVRSDGGWGVLQPVSAT CCCEEEECCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCC FNPPLRGWQRRALVQYLGTQPRDFLAVATPGSGKTSFALRIAAELLRYHTVEQVTVVVPT CCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEC EHLKVQWAHAAAAHGLSLDPKFANSNPQTSPEYHGVMVTYAQVASHPTLHRVRTEARKTL CCEEEEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHCCCHHHHHHHHHHHEE VVFDEIHHGGDAKTWGDAIREAFGDATRRLALTGTPFRSDDSPIPFVSYQPDADGVLRSQ EEEEHHHCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCEEEECCCCCCHHHHC ADHTYGYAEALADGVVRPVVFLAYSGQARWRDSAGEEYEARLGEPLSAEQTARAWRTALD CCCHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHCC PEGEWMPAVITAADRRLRQLRAHVPDAGGMIIASDRTTARAYARLLTTMTAEEPTVVLSD CCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCEEEEEC DPGSSARITEFAQGTSRWLVAVRMVSEGVDVPRLSVGVYATNASTPLFFAQAIGRFVRSR CCCCCCHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHCC RPGETASIFVPSVPNLLQLASALEVQRNHVLGRPHRESAHDPLDGDPATRTQTERGGAER CCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GFTALGADAELDQVIFDGSSFGTATPTGSDEEADYLGIPGLLDAEQMRALLHRRQDEQLR CCEEECCCCCHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHH KRAQLQKGATQPATSGASASVHGQLRDLRRELHTLVSIAHHRTGKPHGWIHDELRRRCGG HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCC PPIAAATRAQIKARIDALRQLNSERS CCCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRVTRLVDAESTRCDVGPAPKSVAMLHFTAATSRFRLGRERANSVRSDGGWGVLQPVSAT CCCEEEECCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCC FNPPLRGWQRRALVQYLGTQPRDFLAVATPGSGKTSFALRIAAELLRYHTVEQVTVVVPT CCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEEC EHLKVQWAHAAAAHGLSLDPKFANSNPQTSPEYHGVMVTYAQVASHPTLHRVRTEARKTL CCEEEEEHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHCCCHHHHHHHHHHHEE VVFDEIHHGGDAKTWGDAIREAFGDATRRLALTGTPFRSDDSPIPFVSYQPDADGVLRSQ EEEEHHHCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCEEEECCCCCCHHHHC ADHTYGYAEALADGVVRPVVFLAYSGQARWRDSAGEEYEARLGEPLSAEQTARAWRTALD CCCHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHCC PEGEWMPAVITAADRRLRQLRAHVPDAGGMIIASDRTTARAYARLLTTMTAEEPTVVLSD CCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCEEEEEC DPGSSARITEFAQGTSRWLVAVRMVSEGVDVPRLSVGVYATNASTPLFFAQAIGRFVRSR CCCCCCHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHCC RPGETASIFVPSVPNLLQLASALEVQRNHVLGRPHRESAHDPLDGDPATRTQTERGGAER CCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GFTALGADAELDQVIFDGSSFGTATPTGSDEEADYLGIPGLLDAEQMRALLHRRQDEQLR CCEEECCCCCHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCHHHHHH KRAQLQKGATQPATSGASASVHGQLRDLRRELHTLVSIAHHRTGKPHGWIHDELRRRCGG HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCC PPIAAATRAQIKARIDALRQLNSERS CCCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]