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The map label for this gene is lppW [H]

Identifier: 148824094

GI number: 148824094

Start: 3226157

End: 3227101

Strand: Direct

Name: lppW [H]

Synonym: TBFG_12919

Alternate gene names: 148824094

Gene position: 3226157-3227101 (Clockwise)

Preceding gene: 148824082

Following gene: 148824100

Centisome position: 72.92

GC content: 66.24

Gene sequence:

>945_bases
ATGCGAGCACGGCCGCTGACGTTGCTCACCGCTTTGGCGGCGGTGACATTGGTGGTGGTTGCGGGCTGCGAGGCCCGAGT
CGAGGCCGAAGCATATAGCGCGGCCGACCGCATTTCGTCTCGACCGCAAGCGCGACCTCAGCCGCAGCCGGTGGAGCTAC
TGCTGCGCGCCATCACGCCGCCTAGGGCTCCGGCGGCGTCGCCGAACGTCGGGTTTGGCGAACTGCCTACCCGGGTCCGG
CAGGCAACCGATGAGGCCGCCGCCATGGGCGCCACCCTCTCGGTGGCGGTGCTCGATCGCGCTACTGGCCAGCTGGTCTC
CAACGGCAACACGCAGATTATCGCTACCGCGTCGGTGGCCAAGCTGTTCATCGCCGACGATCTGCTGCTGGCCGAGGCCG
AGGGCAAAGTCACATTGTCCCCAGAGGACCATCATGCGTTGGACGTCATGCTGCAGTCATCCGACGATGGTGCGGCCGAG
CGATTCTGGAGTCAGGACGGCGGCAATGCCGTCGTCACTCAAGTCGCGCGCCGATATGGGCTCAGGTCGACCGCGCCTCC
CAGCGACGGGCGCTGGTGGAACACAATCAGCTCCGCGCCAGACCTGATCCGCCACTACGACATGCTGCTCGACGGGTCCG
GCGGCCTACCACTGGATCGGGCCGCCGTCATCATCGCCGACCTGGCCCAGTCCACACCGACCGGGATCGACGGCTACCCG
CAGCGGTTCGGCATCCCCGACGGTTTGTACGCCGAACCGGTCGCAGTCAAACAGGGCTGGATGTGCTGTATCGGCAGCAG
CTGGATGCATCTGTCCACCGGGGTGATCGGCCCGGAACGCCGCTACATCATGGTGATCGAGTCACTGCAGCCCGCCGACG
ACGCCACCGCTCGAGCAACCATCACGCAAGCCGTCAGAACGATGTTTCCCAACGGCCGGATCTGA

Upstream 100 bases:

>100_bases
CCCGAAGCTTGGCGTGACACCCAACAGAGGGCACTTAAGAGGGCAATGCGGCCGCCTACCTGCACGTTTTCGCGATGTCA
GAGGATGCCGAGGGAGAACA

Downstream 100 bases:

>100_bases
CGCTCGTCCGGTCGCCTCACCGGCGCGAGCAGACGCAAAAGCCACCGCACGTTCGGCGTGTCGGGGGATTTCGCGTCTGC
TCGCCAGCGGGGCTAGTCGG

Product: lipoprotein lppW

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MRARPLTLLTALAAVTLVVVAGCEARVEAEAYSAADRISSRPQARPQPQPVELLLRAITPPRAPAASPNVGFGELPTRVR
QATDEAAAMGATLSVAVLDRATGQLVSNGNTQIIATASVAKLFIADDLLLAEAEGKVTLSPEDHHALDVMLQSSDDGAAE
RFWSQDGGNAVVTQVARRYGLRSTAPPSDGRWWNTISSAPDLIRHYDMLLDGSGGLPLDRAAVIIADLAQSTPTGIDGYP
QRFGIPDGLYAEPVAVKQGWMCCIGSSWMHLSTGVIGPERRYIMVIESLQPADDATARATITQAVRTMFPNGRI

Sequences:

>Translated_314_residues
MRARPLTLLTALAAVTLVVVAGCEARVEAEAYSAADRISSRPQARPQPQPVELLLRAITPPRAPAASPNVGFGELPTRVR
QATDEAAAMGATLSVAVLDRATGQLVSNGNTQIIATASVAKLFIADDLLLAEAEGKVTLSPEDHHALDVMLQSSDDGAAE
RFWSQDGGNAVVTQVARRYGLRSTAPPSDGRWWNTISSAPDLIRHYDMLLDGSGGLPLDRAAVIIADLAQSTPTGIDGYP
QRFGIPDGLYAEPVAVKQGWMCCIGSSWMHLSTGVIGPERRYIMVIESLQPADDATARATITQAVRTMFPNGRI
>Mature_314_residues
MRARPLTLLTALAAVTLVVVAGCEARVEAEAYSAADRISSRPQARPQPQPVELLLRAITPPRAPAASPNVGFGELPTRVR
QATDEAAAMGATLSVAVLDRATGQLVSNGNTQIIATASVAKLFIADDLLLAEAEGKVTLSPEDHHALDVMLQSSDDGAAE
RFWSQDGGNAVVTQVARRYGLRSTAPPSDGRWWNTISSAPDLIRHYDMLLDGSGGLPLDRAAVIIADLAQSTPTGIDGYP
QRFGIPDGLYAEPVAVKQGWMCCIGSSWMHLSTGVIGPERRYIMVIESLQPADDATARATITQAVRTMFPNGRI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33376; Mature: 33376

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRARPLTLLTALAAVTLVVVAGCEARVEAEAYSAADRISSRPQARPQPQPVELLLRAITP
CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCC
PRAPAASPNVGFGELPTRVRQATDEAAAMGATLSVAVLDRATGQLVSNGNTQIIATASVA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHCCCCCEEEEEEHHHH
KLFIADDLLLAEAEGKVTLSPEDHHALDVMLQSSDDGAAERFWSQDGGNAVVTQVARRYG
HHHHHHCEEEEECCCEEEECCCCCCEEEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHC
LRSTAPPSDGRWWNTISSAPDLIRHYDMLLDGSGGLPLDRAAVIIADLAQSTPTGIDGYP
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCCCCCCCCC
QRFGIPDGLYAEPVAVKQGWMCCIGSSWMHLSTGVIGPERRYIMVIESLQPADDATARAT
HHCCCCCCCCCCCHHHCCCCEEEECCCCHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHH
ITQAVRTMFPNGRI
HHHHHHHHCCCCCC
>Mature Secondary Structure
MRARPLTLLTALAAVTLVVVAGCEARVEAEAYSAADRISSRPQARPQPQPVELLLRAITP
CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCC
PRAPAASPNVGFGELPTRVRQATDEAAAMGATLSVAVLDRATGQLVSNGNTQIIATASVA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHCCCCCEEEEEEHHHH
KLFIADDLLLAEAEGKVTLSPEDHHALDVMLQSSDDGAAERFWSQDGGNAVVTQVARRYG
HHHHHHCEEEEECCCEEEECCCCCCEEEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHC
LRSTAPPSDGRWWNTISSAPDLIRHYDMLLDGSGGLPLDRAAVIIADLAQSTPTGIDGYP
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCCCCCCCCCC
QRFGIPDGLYAEPVAVKQGWMCCIGSSWMHLSTGVIGPERRYIMVIESLQPADDATARAT
HHCCCCCCCCCCCHHHCCCCEEEECCCCHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHH
ITQAVRTMFPNGRI
HHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]