Definition Mycobacterium tuberculosis F11, complete genome.
Accession NC_009565
Length 4,424,435

Click here to switch to the map view.

The map label for this gene is mer [H]

Identifier: 148824082

GI number: 148824082

Start: 3213949

End: 3214926

Strand: Direct

Name: mer [H]

Synonym: TBFG_12907

Alternate gene names: 148824082

Gene position: 3213949-3214926 (Clockwise)

Preceding gene: 148824080

Following gene: 148824094

Centisome position: 72.64

GC content: 69.43

Gene sequence:

>978_bases
ATGACCGTTGCCAGCACCGCTCACCATACACGTCGGCTACGTTTCGGGTTGGCGGCACCGTTGCCCCGCGCGGGCACCCA
GATGCGCGCCTTCGCGCAGGCTGTCGAGGCCGCCGGGTTCGACGTGCTGGCCTTCCCGGACCACCTGGTGCCTTCGGTTT
CGCCGTTCGCAGGCGCGACCGCCGCGGCGATGGCCACGCAACGACTGCACACCGGCACATTGGTGCTCAACAACGACTTT
CGCCATCCCGTGGACACCGCTCGAGAGGCGGCCGGTGTGGCAACCCTCGCCGAAGGCCGCTTCGAACTGGGACTGGGCGC
CGGACACCGGAGGTCCGAATACGACGCCGCCGGCATTACCTTCGATTCCGGGGCAACACGGGTGGCGCGGCTCATCGAAT
CGGCGCACCTGATCCGTGCGCTGCTGGACGCGGAGCCCGTCGACTTCGACGGGCAGCATTACCGGGTGCACGCCGAAGCG
GGCTCACTGGTGGCACCGCCGAAGGTCCGGGTCCCCCTGCTAGTGGGCGGCAACGGGACCGAGGTGCTGCGGCTGGGCGG
ACGCATCGCCGACATTGTCGGCCTGGCCGGGATCAGCCACAACCGCGACGCCACCCAGGTCCGGTTCACCCACTTCGACG
CCGACGGCCTGGCCGACCGGATCGCCGTGGTACGTCACGCGGCCGGCGATCGCTTCGAAGCCATTGAGCTCAACGCGCTG
ATCCAGGCGGTGGTCTGCACCAACGACCGAAACGCGGCGGCCGCCGAACTGGCCGCCACCTTGGGCGGGATCACGCCCGA
GCAGGTCCTCGAGTCGCCGTTTCTGCTGCTCGGTACCCACGAGCAGATGGCCGAGGCTCTCGCCGCGCGGCAGCGGCGGT
TCGGTGTCAGCTATTGGACGGTGTTCGACGAGTGGGCTGGCCGCGCGTCGGCAATGCGCGACATCGCCGAGGTCATCGCG
CTCCTGCGCTACGGCTAG

Upstream 100 bases:

>100_bases
AAGGAAGTCGGCGCGTTACCCACAGCTCGATATTCGGGGTCCTGCCGGCCCGAACCGCCACCGCACAATCGATGCCGGCT
TCGCGGCTACCGTCGACTCC

Downstream 100 bases:

>100_bases
GCCCGCGGATGGGCCCGCTCGTGCACCGCCCGCAACCGGGCGACCGCGACGTGGGTGTACAGCTGCGTGGTCGCCAGGCT
GGAATGACCGAGCAGCTCCT

Product: oxidoreductase

Products: NA

Alternate protein names: Coenzyme F420-dependent N(5),N(10)-methylenetetrahydromethanopterin reductase; Methylene-H(4)MPT reductase [H]

Number of amino acids: Translated: 325; Mature: 324

Protein sequence:

>325_residues
MTVASTAHHTRRLRFGLAAPLPRAGTQMRAFAQAVEAAGFDVLAFPDHLVPSVSPFAGATAAAMATQRLHTGTLVLNNDF
RHPVDTAREAAGVATLAEGRFELGLGAGHRRSEYDAAGITFDSGATRVARLIESAHLIRALLDAEPVDFDGQHYRVHAEA
GSLVAPPKVRVPLLVGGNGTEVLRLGGRIADIVGLAGISHNRDATQVRFTHFDADGLADRIAVVRHAAGDRFEAIELNAL
IQAVVCTNDRNAAAAELAATLGGITPEQVLESPFLLLGTHEQMAEALAARQRRFGVSYWTVFDEWAGRASAMRDIAEVIA
LLRYG

Sequences:

>Translated_325_residues
MTVASTAHHTRRLRFGLAAPLPRAGTQMRAFAQAVEAAGFDVLAFPDHLVPSVSPFAGATAAAMATQRLHTGTLVLNNDF
RHPVDTAREAAGVATLAEGRFELGLGAGHRRSEYDAAGITFDSGATRVARLIESAHLIRALLDAEPVDFDGQHYRVHAEA
GSLVAPPKVRVPLLVGGNGTEVLRLGGRIADIVGLAGISHNRDATQVRFTHFDADGLADRIAVVRHAAGDRFEAIELNAL
IQAVVCTNDRNAAAAELAATLGGITPEQVLESPFLLLGTHEQMAEALAARQRRFGVSYWTVFDEWAGRASAMRDIAEVIA
LLRYG
>Mature_324_residues
TVASTAHHTRRLRFGLAAPLPRAGTQMRAFAQAVEAAGFDVLAFPDHLVPSVSPFAGATAAAMATQRLHTGTLVLNNDFR
HPVDTAREAAGVATLAEGRFELGLGAGHRRSEYDAAGITFDSGATRVARLIESAHLIRALLDAEPVDFDGQHYRVHAEAG
SLVAPPKVRVPLLVGGNGTEVLRLGGRIADIVGLAGISHNRDATQVRFTHFDADGLADRIAVVRHAAGDRFEAIELNALI
QAVVCTNDRNAAAAELAATLGGITPEQVLESPFLLLGTHEQMAEALAARQRRFGVSYWTVFDEWAGRASAMRDIAEVIAL
LRYG

Specific function: Catalyzes the reversible reduction of methylene-H(4)MPT to methyl-H(4)MPT [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mer family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR016048
- InterPro:   IPR019946 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: =1.5.99.11 [H]

Molecular weight: Translated: 34618; Mature: 34486

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVASTAHHTRRLRFGLAAPLPRAGTQMRAFAQAVEAAGFDVLAFPDHLVPSVSPFAGAT
CCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCHHHCCCCCCCCCHH
AAAMATQRLHTGTLVLNNDFRHPVDTAREAAGVATLAEGRFELGLGAGHRRSEYDAAGIT
HHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCHHHHHCCCEEECCCCCCCCCCCCCCCEE
FDSGATRVARLIESAHLIRALLDAEPVDFDGQHYRVHAEAGSLVAPPKVRVPLLVGGNGT
ECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEECCCCEEEEEEECCCCC
EVLRLGGRIADIVGLAGISHNRDATQVRFTHFDADGLADRIAVVRHAAGDRFEAIELNAL
EEEHHCCHHHHHHHHCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCCEEEHHHH
IQAVVCTNDRNAAAAELAATLGGITPEQVLESPFLLLGTHEQMAEALAARQRRFGVSYWT
HEEHEECCCCCHHHHHHHHHHCCCCHHHHHCCCEEEEECHHHHHHHHHHHHHHCCCHHHH
VFDEWAGRASAMRDIAEVIALLRYG
HHHHHCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TVASTAHHTRRLRFGLAAPLPRAGTQMRAFAQAVEAAGFDVLAFPDHLVPSVSPFAGAT
CCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCHHHCCCCCCCCCHH
AAAMATQRLHTGTLVLNNDFRHPVDTAREAAGVATLAEGRFELGLGAGHRRSEYDAAGIT
HHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCHHHHHCCCEEECCCCCCCCCCCCCCCEE
FDSGATRVARLIESAHLIRALLDAEPVDFDGQHYRVHAEAGSLVAPPKVRVPLLVGGNGT
ECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEECCCCEEEEEEECCCCC
EVLRLGGRIADIVGLAGISHNRDATQVRFTHFDADGLADRIAVVRHAAGDRFEAIELNAL
EEEHHCCHHHHHHHHCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCCEEEHHHH
IQAVVCTNDRNAAAAELAATLGGITPEQVLESPFLLLGTHEQMAEALAARQRRFGVSYWT
HEEHEECCCCCHHHHHHHHHHCCCCHHHHHCCCEEEEECHHHHHHHHHHHHHHCCCHHHH
VFDEWAGRASAMRDIAEVIALLRYG
HHHHHCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11932238 [H]