Definition | Mycobacterium tuberculosis F11, complete genome. |
---|---|
Accession | NC_009565 |
Length | 4,424,435 |
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The map label for this gene is mer [H]
Identifier: 148824082
GI number: 148824082
Start: 3213949
End: 3214926
Strand: Direct
Name: mer [H]
Synonym: TBFG_12907
Alternate gene names: 148824082
Gene position: 3213949-3214926 (Clockwise)
Preceding gene: 148824080
Following gene: 148824094
Centisome position: 72.64
GC content: 69.43
Gene sequence:
>978_bases ATGACCGTTGCCAGCACCGCTCACCATACACGTCGGCTACGTTTCGGGTTGGCGGCACCGTTGCCCCGCGCGGGCACCCA GATGCGCGCCTTCGCGCAGGCTGTCGAGGCCGCCGGGTTCGACGTGCTGGCCTTCCCGGACCACCTGGTGCCTTCGGTTT CGCCGTTCGCAGGCGCGACCGCCGCGGCGATGGCCACGCAACGACTGCACACCGGCACATTGGTGCTCAACAACGACTTT CGCCATCCCGTGGACACCGCTCGAGAGGCGGCCGGTGTGGCAACCCTCGCCGAAGGCCGCTTCGAACTGGGACTGGGCGC CGGACACCGGAGGTCCGAATACGACGCCGCCGGCATTACCTTCGATTCCGGGGCAACACGGGTGGCGCGGCTCATCGAAT CGGCGCACCTGATCCGTGCGCTGCTGGACGCGGAGCCCGTCGACTTCGACGGGCAGCATTACCGGGTGCACGCCGAAGCG GGCTCACTGGTGGCACCGCCGAAGGTCCGGGTCCCCCTGCTAGTGGGCGGCAACGGGACCGAGGTGCTGCGGCTGGGCGG ACGCATCGCCGACATTGTCGGCCTGGCCGGGATCAGCCACAACCGCGACGCCACCCAGGTCCGGTTCACCCACTTCGACG CCGACGGCCTGGCCGACCGGATCGCCGTGGTACGTCACGCGGCCGGCGATCGCTTCGAAGCCATTGAGCTCAACGCGCTG ATCCAGGCGGTGGTCTGCACCAACGACCGAAACGCGGCGGCCGCCGAACTGGCCGCCACCTTGGGCGGGATCACGCCCGA GCAGGTCCTCGAGTCGCCGTTTCTGCTGCTCGGTACCCACGAGCAGATGGCCGAGGCTCTCGCCGCGCGGCAGCGGCGGT TCGGTGTCAGCTATTGGACGGTGTTCGACGAGTGGGCTGGCCGCGCGTCGGCAATGCGCGACATCGCCGAGGTCATCGCG CTCCTGCGCTACGGCTAG
Upstream 100 bases:
>100_bases AAGGAAGTCGGCGCGTTACCCACAGCTCGATATTCGGGGTCCTGCCGGCCCGAACCGCCACCGCACAATCGATGCCGGCT TCGCGGCTACCGTCGACTCC
Downstream 100 bases:
>100_bases GCCCGCGGATGGGCCCGCTCGTGCACCGCCCGCAACCGGGCGACCGCGACGTGGGTGTACAGCTGCGTGGTCGCCAGGCT GGAATGACCGAGCAGCTCCT
Product: oxidoreductase
Products: NA
Alternate protein names: Coenzyme F420-dependent N(5),N(10)-methylenetetrahydromethanopterin reductase; Methylene-H(4)MPT reductase [H]
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MTVASTAHHTRRLRFGLAAPLPRAGTQMRAFAQAVEAAGFDVLAFPDHLVPSVSPFAGATAAAMATQRLHTGTLVLNNDF RHPVDTAREAAGVATLAEGRFELGLGAGHRRSEYDAAGITFDSGATRVARLIESAHLIRALLDAEPVDFDGQHYRVHAEA GSLVAPPKVRVPLLVGGNGTEVLRLGGRIADIVGLAGISHNRDATQVRFTHFDADGLADRIAVVRHAAGDRFEAIELNAL IQAVVCTNDRNAAAAELAATLGGITPEQVLESPFLLLGTHEQMAEALAARQRRFGVSYWTVFDEWAGRASAMRDIAEVIA LLRYG
Sequences:
>Translated_325_residues MTVASTAHHTRRLRFGLAAPLPRAGTQMRAFAQAVEAAGFDVLAFPDHLVPSVSPFAGATAAAMATQRLHTGTLVLNNDF RHPVDTAREAAGVATLAEGRFELGLGAGHRRSEYDAAGITFDSGATRVARLIESAHLIRALLDAEPVDFDGQHYRVHAEA GSLVAPPKVRVPLLVGGNGTEVLRLGGRIADIVGLAGISHNRDATQVRFTHFDADGLADRIAVVRHAAGDRFEAIELNAL IQAVVCTNDRNAAAAELAATLGGITPEQVLESPFLLLGTHEQMAEALAARQRRFGVSYWTVFDEWAGRASAMRDIAEVIA LLRYG >Mature_324_residues TVASTAHHTRRLRFGLAAPLPRAGTQMRAFAQAVEAAGFDVLAFPDHLVPSVSPFAGATAAAMATQRLHTGTLVLNNDFR HPVDTAREAAGVATLAEGRFELGLGAGHRRSEYDAAGITFDSGATRVARLIESAHLIRALLDAEPVDFDGQHYRVHAEAG SLVAPPKVRVPLLVGGNGTEVLRLGGRIADIVGLAGISHNRDATQVRFTHFDADGLADRIAVVRHAAGDRFEAIELNALI QAVVCTNDRNAAAAELAATLGGITPEQVLESPFLLLGTHEQMAEALAARQRRFGVSYWTVFDEWAGRASAMRDIAEVIAL LRYG
Specific function: Catalyzes the reversible reduction of methylene-H(4)MPT to methyl-H(4)MPT [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mer family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011251 - InterPro: IPR016048 - InterPro: IPR019946 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: =1.5.99.11 [H]
Molecular weight: Translated: 34618; Mature: 34486
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVASTAHHTRRLRFGLAAPLPRAGTQMRAFAQAVEAAGFDVLAFPDHLVPSVSPFAGAT CCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCHHHCCCCCCCCCHH AAAMATQRLHTGTLVLNNDFRHPVDTAREAAGVATLAEGRFELGLGAGHRRSEYDAAGIT HHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCHHHHHCCCEEECCCCCCCCCCCCCCCEE FDSGATRVARLIESAHLIRALLDAEPVDFDGQHYRVHAEAGSLVAPPKVRVPLLVGGNGT ECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEECCCCEEEEEEECCCCC EVLRLGGRIADIVGLAGISHNRDATQVRFTHFDADGLADRIAVVRHAAGDRFEAIELNAL EEEHHCCHHHHHHHHCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCCEEEHHHH IQAVVCTNDRNAAAAELAATLGGITPEQVLESPFLLLGTHEQMAEALAARQRRFGVSYWT HEEHEECCCCCHHHHHHHHHHCCCCHHHHHCCCEEEEECHHHHHHHHHHHHHHCCCHHHH VFDEWAGRASAMRDIAEVIALLRYG HHHHHCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TVASTAHHTRRLRFGLAAPLPRAGTQMRAFAQAVEAAGFDVLAFPDHLVPSVSPFAGAT CCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEECCHHHCCCCCCCCCHH AAAMATQRLHTGTLVLNNDFRHPVDTAREAAGVATLAEGRFELGLGAGHRRSEYDAAGIT HHHHHHHHHCCCEEEEECCCCCCHHHHHHHHCHHHHHCCCEEECCCCCCCCCCCCCCCEE FDSGATRVARLIESAHLIRALLDAEPVDFDGQHYRVHAEAGSLVAPPKVRVPLLVGGNGT ECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEECCCCEEEEEEECCCCC EVLRLGGRIADIVGLAGISHNRDATQVRFTHFDADGLADRIAVVRHAAGDRFEAIELNAL EEEHHCCHHHHHHHHCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCCEEEHHHH IQAVVCTNDRNAAAAELAATLGGITPEQVLESPFLLLGTHEQMAEALAARQRRFGVSYWT HEEHEECCCCCHHHHHHHHHHCCCCHHHHHCCCEEEEECHHHHHHHHHHHHHHCCCHHHH VFDEWAGRASAMRDIAEVIALLRYG HHHHHCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11932238 [H]