Definition | Mycobacterium tuberculosis F11, complete genome. |
---|---|
Accession | NC_009565 |
Length | 4,424,435 |
Click here to switch to the map view.
The map label for this gene is echA8 [H]
Identifier: 148824021
GI number: 148824021
Start: 3148909
End: 3149658
Strand: Direct
Name: echA8 [H]
Synonym: TBFG_12846
Alternate gene names: 148824021
Gene position: 3148909-3149658 (Clockwise)
Preceding gene: 148824002
Following gene: 148824033
Centisome position: 71.17
GC content: 70.53
Gene sequence:
>750_bases ATGACCGACGACATCCTGCTGATCGACACCGACGAACGGGTGCGAACCCTCACCCTCAACCGGCCGCAGTCCCGCAACGC GCTCTCGGCGGCGCTACGGGATCGGTTTTTCGCGGCGTTGGCCGACGCCGAGGCCGACGACGACATCGACGTCGTCATCC TCACCGGCGCCGATCCGGTGTTCTGCGCCGGACTGGACCTCAAGGAGCTGGCCGGGCAGACCGCGCTGCCGGACATCTCA CCGCGGTGGCCGGCCATGACCAAGCCGGTGATCGGCGCGATCAACGGCGCCGCGGTCACCGGCGGGCTCGAACTGGCGCT GTACTGCGACATCCTGATCGCCTCCGAGCACGCCCGCTTCGCCGACACCCACGCCCGGGTGGGCCTGCTGCCCACCTGGG GACTCAGCGTGCGCTTGCCGCAAAAGGTCGGCATCGGCCTGGCCCGGCGGATGAGCCTGACCGGCGACTACCTGTCCGCG ACCGACGCGTTGCGGGCCGGCCTGGTCACCGAGGTGGTGGCCCACGACCAGCTGCTGCCCACCGCCCGCCGGGTGGCGGC GTCGATCGTCGGCAACAACCAGAACGCGGTGCGGGCATTGCTGGCGTCCTACCACCGCATCGACGAGTCTCAGACCGCCG CCGGGCTGTGGCTGGAAGCCTGCGCGGCCAAGCAATTTCGCACTAGCGGCGATACCATCGCCGCCAACCGCGAAGCCGTG CTGCAGCGCGGCCGCGCGCAGGTGCGTTAG
Upstream 100 bases:
>100_bases GGCCACTTCATCAAGCAAGGAGAGGATCTTCGCCTTCACCTCCGTAGCGGTCATTTTTCTGGTCATTAGGACAGTCTAAC GGTCCTGTTACGGTGATCGA
Downstream 100 bases:
>100_bases CGGCGATCGCAAGCGCGGCGAAGCCGGGTGCTGGGGGTACCTCCCGCGTGCGGGGGACGGGTCGCCGCCATCAGCCCTTC AGCGAAGCCGGGTCTCGGTG
Product: enoyl-CoA hydratase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 248
Protein sequence:
>249_residues MTDDILLIDTDERVRTLTLNRPQSRNALSAALRDRFFAALADAEADDDIDVVILTGADPVFCAGLDLKELAGQTALPDIS PRWPAMTKPVIGAINGAAVTGGLELALYCDILIASEHARFADTHARVGLLPTWGLSVRLPQKVGIGLARRMSLTGDYLSA TDALRAGLVTEVVAHDQLLPTARRVAASIVGNNQNAVRALLASYHRIDESQTAAGLWLEACAAKQFRTSGDTIAANREAV LQRGRAQVR
Sequences:
>Translated_249_residues MTDDILLIDTDERVRTLTLNRPQSRNALSAALRDRFFAALADAEADDDIDVVILTGADPVFCAGLDLKELAGQTALPDIS PRWPAMTKPVIGAINGAAVTGGLELALYCDILIASEHARFADTHARVGLLPTWGLSVRLPQKVGIGLARRMSLTGDYLSA TDALRAGLVTEVVAHDQLLPTARRVAASIVGNNQNAVRALLASYHRIDESQTAAGLWLEACAAKQFRTSGDTIAANREAV LQRGRAQVR >Mature_248_residues TDDILLIDTDERVRTLTLNRPQSRNALSAALRDRFFAALADAEADDDIDVVILTGADPVFCAGLDLKELAGQTALPDISP RWPAMTKPVIGAINGAAVTGGLELALYCDILIASEHARFADTHARVGLLPTWGLSVRLPQKVGIGLARRMSLTGDYLSAT DALRAGLVTEVVAHDQLLPTARRVAASIVGNNQNAVRALLASYHRIDESQTAAGLWLEACAAKQFRTSGDTIAANREAVL QRGRAQVR
Specific function: Could possibly oxidize fatty acids using specific components [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=194, Percent_Identity=39.1752577319588, Blast_Score=125, Evalue=3e-29, Organism=Homo sapiens, GI31542718, Length=206, Percent_Identity=29.6116504854369, Blast_Score=88, Evalue=6e-18, Organism=Homo sapiens, GI116235487, Length=183, Percent_Identity=31.1475409836066, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI20127408, Length=174, Percent_Identity=32.183908045977, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI70995211, Length=233, Percent_Identity=27.0386266094421, Blast_Score=79, Evalue=5e-15, Organism=Homo sapiens, GI37594469, Length=212, Percent_Identity=27.8301886792453, Blast_Score=76, Evalue=2e-14, Organism=Homo sapiens, GI37594471, Length=212, Percent_Identity=27.8301886792453, Blast_Score=76, Evalue=2e-14, Organism=Homo sapiens, GI25453481, Length=182, Percent_Identity=27.4725274725275, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI51538573, Length=182, Percent_Identity=27.4725274725275, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI4757968, Length=182, Percent_Identity=26.9230769230769, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI49355787, Length=182, Percent_Identity=26.9230769230769, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI4757966, Length=182, Percent_Identity=27.4725274725275, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI51538581, Length=182, Percent_Identity=27.4725274725275, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI221136756, Length=182, Percent_Identity=28.021978021978, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI221136753, Length=182, Percent_Identity=28.021978021978, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI221307494, Length=182, Percent_Identity=28.021978021978, Blast_Score=68, Evalue=6e-12, Organism=Homo sapiens, GI45643119, Length=220, Percent_Identity=25.4545454545455, Blast_Score=68, Evalue=7e-12, Organism=Homo sapiens, GI260275230, Length=220, Percent_Identity=25.4545454545455, Blast_Score=68, Evalue=7e-12, Organism=Homo sapiens, GI4502327, Length=185, Percent_Identity=30.2702702702703, Blast_Score=68, Evalue=8e-12, Organism=Homo sapiens, GI260274832, Length=220, Percent_Identity=25.4545454545455, Blast_Score=68, Evalue=9e-12, Organism=Escherichia coli, GI1787659, Length=221, Percent_Identity=37.5565610859729, Blast_Score=129, Evalue=2e-31, Organism=Escherichia coli, GI221142681, Length=205, Percent_Identity=34.1463414634146, Blast_Score=100, Evalue=9e-23, Organism=Escherichia coli, GI1788597, Length=214, Percent_Identity=33.1775700934579, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI1787660, Length=196, Percent_Identity=34.6938775510204, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1788682, Length=204, Percent_Identity=30.3921568627451, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1790281, Length=195, Percent_Identity=27.1794871794872, Blast_Score=67, Evalue=1e-12, Organism=Caenorhabditis elegans, GI25145438, Length=215, Percent_Identity=35.8139534883721, Blast_Score=117, Evalue=5e-27, Organism=Caenorhabditis elegans, GI17554946, Length=192, Percent_Identity=32.8125, Blast_Score=111, Evalue=3e-25, Organism=Caenorhabditis elegans, GI17540714, Length=192, Percent_Identity=36.4583333333333, Blast_Score=104, Evalue=4e-23, Organism=Caenorhabditis elegans, GI17560910, Length=181, Percent_Identity=32.5966850828729, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17540306, Length=188, Percent_Identity=31.9148936170213, Blast_Score=74, Evalue=8e-14, Organism=Caenorhabditis elegans, GI17549921, Length=219, Percent_Identity=29.2237442922374, Blast_Score=65, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6320241, Length=193, Percent_Identity=26.9430051813472, Blast_Score=76, Evalue=4e-15, Organism=Drosophila melanogaster, GI20129971, Length=196, Percent_Identity=36.734693877551, Blast_Score=121, Evalue=3e-28, Organism=Drosophila melanogaster, GI24653477, Length=196, Percent_Identity=36.734693877551, Blast_Score=121, Evalue=3e-28, Organism=Drosophila melanogaster, GI24650670, Length=194, Percent_Identity=33.5051546391753, Blast_Score=96, Evalue=2e-20, Organism=Drosophila melanogaster, GI24653139, Length=236, Percent_Identity=28.8135593220339, Blast_Score=96, Evalue=3e-20, Organism=Drosophila melanogaster, GI21357171, Length=239, Percent_Identity=28.4518828451883, Blast_Score=94, Evalue=7e-20, Organism=Drosophila melanogaster, GI19922422, Length=191, Percent_Identity=27.2251308900524, Blast_Score=74, Evalue=6e-14, Organism=Drosophila melanogaster, GI24654903, Length=184, Percent_Identity=23.3695652173913, Blast_Score=64, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.17 [H]
Molecular weight: Translated: 26631; Mature: 26499
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDDILLIDTDERVRTLTLNRPQSRNALSAALRDRFFAALADAEADDDIDVVILTGADPV CCCCEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCE FCAGLDLKELAGQTALPDISPRWPAMTKPVIGAINGAAVTGGLELALYCDILIASEHARF EEECCCHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCEEECCEEEEEEEEEEEECCCCHH ADTHARVGLLPTWGLSVRLPQKVGIGLARRMSLTGDYLSATDALRAGLVTEVVAHDQLLP HHCCCCEECCCCCCCEEECCHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH TARRVAASIVGNNQNAVRALLASYHRIDESQTAAGLWLEACAAKQFRTSGDTIAANREAV HHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEECCHHHH LQRGRAQVR HHCCCCCCC >Mature Secondary Structure TDDILLIDTDERVRTLTLNRPQSRNALSAALRDRFFAALADAEADDDIDVVILTGADPV CCCEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCE FCAGLDLKELAGQTALPDISPRWPAMTKPVIGAINGAAVTGGLELALYCDILIASEHARF EEECCCHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCCEEECCEEEEEEEEEEEECCCCHH ADTHARVGLLPTWGLSVRLPQKVGIGLARRMSLTGDYLSATDALRAGLVTEVVAHDQLLP HHCCCCEECCCCCCCEEECCHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH TARRVAASIVGNNQNAVRALLASYHRIDESQTAAGLWLEACAAKQFRTSGDTIAANREAV HHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEECCHHHH LQRGRAQVR HHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]