Definition | Mycobacterium tuberculosis F11, complete genome. |
---|---|
Accession | NC_009565 |
Length | 4,424,435 |
Click here to switch to the map view.
The map label for this gene is exeA [H]
Identifier: 148824002
GI number: 148824002
Start: 3130179
End: 3130991
Strand: Direct
Name: exeA [H]
Synonym: TBFG_12827
Alternate gene names: 148824002
Gene position: 3130179-3130991 (Clockwise)
Preceding gene: 148824001
Following gene: 148824021
Centisome position: 70.75
GC content: 67.53
Gene sequence:
>813_bases ATGATGCACAAACTGATCTCGTATTACGGTTTTTCGCGCATGCCATTCGGCCGCGATCTGGCACCGGGCATGCTGCATCG CCACAGCGCGCACAACGAAGCGGTCGCCCGCATCGGCTGGTGCATCGCCGACCGCCGCATCGGCGTCATCACCGGCGAAG TCGGCGCCGGCAAGACCGTCGCCGTGCGCGCCGCACTAGCGAGCCTGGATCGCAGCCGCCACACCATCATCTACCTGCCC GACCCCACCGTCGGCGTCCAGGGCATCCACCACCGCATCGTCGCCTCGCTCGGCGGACAACCCCTCACCCACCACGCCAC CCTGGCCCCACAGGCCGCCGACGCGCTAGCCGCCGAACAAGCCGAGCGCGGACGCACCCCCGTCGTGGTCGTCGAGGAAG CGCACCTGCTCGGCTATGACCAACTGGAGGCGTTGCGGCTCTTGACAAATCACGACCTCGACTCGTCAAGCCCGTTCGCC TGCCTGCTCATCGGCCAACCCACCCTGCGGCGGCGGATGAAACTCGGCGTGCTCGCCGCGCTTGACCAGCGCATCGGACT CCGATATGCCATGCCGCCCATGACCGACACCAACACCGGCAGCTACCTACGCCACCACCTCAAGCTAGCCGGACGCGACG ATGCCCTGTTCTCCGACGACGCCATCGGGTTGATCCACCAGACCAGCCGGGGCTACCCCCGCGCGGTCAACAACCTCGCC CTGCAAGCCCTCGTCGCCGCCTTCGCCGCCGACAAGGCCATCGTCGACGAATCCACCACCCGCACCGCCATCGCCGAAGT CACGGCAGACTGA
Upstream 100 bases:
>100_bases CCGAACTCGCCCGCGGCGTCAACTACACCGCCCTCACCGGGGCTGCCGATCAGATCCCCGGCCAGCTCGACCTGCTCACC GGCCAGGAGGCCCAACCGAA
Downstream 100 bases:
>100_bases ACACCACACCGACACCCCGAACACCACCGACCCCGCCGGACATCTCCCGGCGGGGTCATTTCATGACCAAACGTCCTCAC CGTCAACGCCGCCATCATGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MMHKLISYYGFSRMPFGRDLAPGMLHRHSAHNEAVARIGWCIADRRIGVITGEVGAGKTVAVRAALASLDRSRHTIIYLP DPTVGVQGIHHRIVASLGGQPLTHHATLAPQAADALAAEQAERGRTPVVVVEEAHLLGYDQLEALRLLTNHDLDSSSPFA CLLIGQPTLRRRMKLGVLAALDQRIGLRYAMPPMTDTNTGSYLRHHLKLAGRDDALFSDDAIGLIHQTSRGYPRAVNNLA LQALVAAFAADKAIVDESTTRTAIAEVTAD
Sequences:
>Translated_270_residues MMHKLISYYGFSRMPFGRDLAPGMLHRHSAHNEAVARIGWCIADRRIGVITGEVGAGKTVAVRAALASLDRSRHTIIYLP DPTVGVQGIHHRIVASLGGQPLTHHATLAPQAADALAAEQAERGRTPVVVVEEAHLLGYDQLEALRLLTNHDLDSSSPFA CLLIGQPTLRRRMKLGVLAALDQRIGLRYAMPPMTDTNTGSYLRHHLKLAGRDDALFSDDAIGLIHQTSRGYPRAVNNLA LQALVAAFAADKAIVDESTTRTAIAEVTAD >Mature_270_residues MMHKLISYYGFSRMPFGRDLAPGMLHRHSAHNEAVARIGWCIADRRIGVITGEVGAGKTVAVRAALASLDRSRHTIIYLP DPTVGVQGIHHRIVASLGGQPLTHHATLAPQAADALAAEQAERGRTPVVVVEEAHLLGYDQLEALRLLTNHDLDSSSPFA CLLIGQPTLRRRMKLGVLAALDQRIGLRYAMPPMTDTNTGSYLRHHLKLAGRDDALFSDDAIGLIHQTSRGYPRAVNNLA LQALVAAFAADKAIVDESTTRTAIAEVTAD
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]
COG id: COG3267
COG function: function code U; Type II secretory pathway, component ExeA (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm. Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the exeA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR002477 [H]
Pfam domain/function: PF00004 AAA; PF01471 PG_binding_1 [H]
EC number: NA
Molecular weight: Translated: 29193; Mature: 29193
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMHKLISYYGFSRMPFGRDLAPGMLHRHSAHNEAVARIGWCIADRRIGVITGEVGAGKTV CHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCCEEEEEECCCCCCCHH AVRAALASLDRSRHTIIYLPDPTVGVQGIHHRIVASLGGQPLTHHATLAPQAADALAAEQ HHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH AERGRTPVVVVEEAHLLGYDQLEALRLLTNHDLDSSSPFACLLIGQPTLRRRMKLGVLAA HHCCCCCEEEEECCHHCCHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHH LDQRIGLRYAMPPMTDTNTGSYLRHHLKLAGRDDALFSDDAIGLIHQTSRGYPRAVNNLA HHHHCCCEEECCCCCCCCCHHHHHHHHHHCCCCCCEECCCCEEEEECCCCCCCHHHHHHH LQALVAAFAADKAIVDESTTRTAIAEVTAD HHHHHHHHHHCHHHHCCCCCHHEEEEECCC >Mature Secondary Structure MMHKLISYYGFSRMPFGRDLAPGMLHRHSAHNEAVARIGWCIADRRIGVITGEVGAGKTV CHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHCCEEEEEECCCCCCCHH AVRAALASLDRSRHTIIYLPDPTVGVQGIHHRIVASLGGQPLTHHATLAPQAADALAAEQ HHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH AERGRTPVVVVEEAHLLGYDQLEALRLLTNHDLDSSSPFACLLIGQPTLRRRMKLGVLAA HHCCCCCEEEEECCHHCCHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHH LDQRIGLRYAMPPMTDTNTGSYLRHHLKLAGRDDALFSDDAIGLIHQTSRGYPRAVNNLA HHHHCCCEEECCCCCCCCCHHHHHHHHHHCCCCCCEECCCCEEEEECCCCCCCHHHHHHH LQALVAAFAADKAIVDESTTRTAIAEVTAD HHHHHHHHHHCHHHHCCCCCHHEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7961440 [H]