Definition | Mycobacterium tuberculosis F11, complete genome. |
---|---|
Accession | NC_009565 |
Length | 4,424,435 |
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The map label for this gene is 148823985
Identifier: 148823985
GI number: 148823985
Start: 3117574
End: 3119262
Strand: Reverse
Name: 148823985
Synonym: TBFG_12810
Alternate gene names: NA
Gene position: 3119262-3117574 (Counterclockwise)
Preceding gene: 148823986
Following gene: 148823984
Centisome position: 70.5
GC content: 69.15
Gene sequence:
>1689_bases GTGCCACTGACCGTGGCCGATATCGATCGGTGGAACGCGCAAGCGGTCCGGGAGGTGTTTCACGCGGCCAGTGCCCGAGC GGAGGTGACGTTCGAGGCGTCGCGTCAGTTGGCCGCGCTGTCGATTTTTGCGAACTCGGGTGGCAAGACCGCTGAGGCGG CGGCACACCACAACGCGGGCATTCGCCGAGACCTCGACGCCCACGGCAACGAGGCGTTGGCGGTTGCCCGGGCGGCCGAC AGGGCCGCCGACGGGATTGTGAAGGTTCAGTCCGAGCTGGCCGCACTACGCCATGCCGCCGCGGCCGCCGAGCTGACGAT CGATGCGCTGATCAACCGGGTGGTGCCGATCCCCGGGCTGCGATCCACCGAGGCGCAGTGGGCGCGGACGCTGGCCAAGC AAACGGAGCTGCAGGCGGAGCTGGATGCGATTATGGCCGAGGCCAATGCCGTCGACGAGGAGCTGGCCTCAGCGGTCAAT ATGGCCGACGGTGACGCGCCCATCCCGGCCGATTCCGGCCCGCCGGTCGGTCCCGAGGGGCTGACCCCGACCCAGCTCGC CAGCGATGCCAACGAGGAGCGGCTGCGCGAGGAGCGCGCCCGCCTGCAGGCCCACCTCGAGCGGTTACAGGCGGAGTATG ACCAACTGAGTGTGCGGGCCGCCCGTGACTACCACAACGGCATCCTCGACGGTGACGCGGTGGGCCGACTGGCAGCGCTT ACCGACGAGCTGAGCGCCGCCAGGGGCCGGCTGGGTGAGCTCGATGCCGTCGACGAGGCGTTGAGCCGAGCACCCGAGAC CTACCTGACCCAGCTGCAGATTCCCGAGGACCCAAATCAGCAGGTGCTGGCGGCCGTGGCCGTCGGTAATCCCGACACCG CCGCCAATGTGTCGGTGACGGTTCCCGGCGTCGGGTCCACCACCCGGGGCGCCCTGCCCGGCATGGTGACCGAAGCCCGC GACCTGCGGTCGGAGGTAATCCGGCAACTCAATGCTGCCGGCAAGCCCGCATCGGTTGCCACCATCGCCTGGATGGGCTA CCACCCGCCCCCGAACCCACTCGACACCGGCAGTGCGGGCGATCTGTGGCAGACCATGACCGATGGGCAGGCACACGCGG GCGCGGCCGATCTGTCGCGGTATTTGCAGCAGGTGCGCGCCAATAACCCCAGTGGCCACCTGACCGTGTTGGGGCACTCG TATGGGTCGCTGACGGCGTCGCTGGCGTTGCAGGACCTCGATGCCCAGAGCGCCCATCCGGTCAACGACGTCGTGTTTTA CGGCTCACCCGGCTTGGAGCTGTACAGCCCGGCGCAGCTCGGGCTCGATCACGGGCACGCTTATGTCATGCAGGCCCCCC ACGACCTCATCACCAATCTGGTGGCGCCGTTGGCGCCGCTGCACGGATGGGGCCTGGACCCCTATCTGACCCCCGGGTTC ACGGAGCTGTCGTCACAGGCGGGTTTTGATCCGGGCGGGATCTGGCGTGACGGAGTGTATGCCCACGGGGACTACCCGCG GTCCTTCCTCGATGCCGCCGGCCAGCCGCAGCTGCGGATGTCCGGCTATAACCTGGCGGCGATCGCCGCCGGGCTGCCCG ACAACACGGTGGGCCCGCCGCTGCTTCCGCCAATTCTGGGTGGCGGCATGCCGGCAGCGCCCGGCCCAGCACTGAGAGGG GGACGTTGA
Upstream 100 bases:
>100_bases CGCTATCCAGCATGCGGCGGCGGAGGCGGAGCGGGCGCAGGCGCTCGCCCAGGTGGGTGTTTCCGCCGACGTCGTAGCTG GTCCGCGTGGGGTGTGATTC
Downstream 100 bases:
>100_bases TGCGGTGGCCGACGGCGTGGCTGCTGGCTCTGGTGTGTGTGATGGCGACTGGGTGCGGACCCAGTGGCCACGGGACGCGG GCCGGCGAGGAGGGGCCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 562; Mature: 561
Protein sequence:
>562_residues MPLTVADIDRWNAQAVREVFHAASARAEVTFEASRQLAALSIFANSGGKTAEAAAHHNAGIRRDLDAHGNEALAVARAAD RAADGIVKVQSELAALRHAAAAAELTIDALINRVVPIPGLRSTEAQWARTLAKQTELQAELDAIMAEANAVDEELASAVN MADGDAPIPADSGPPVGPEGLTPTQLASDANEERLREERARLQAHLERLQAEYDQLSVRAARDYHNGILDGDAVGRLAAL TDELSAARGRLGELDAVDEALSRAPETYLTQLQIPEDPNQQVLAAVAVGNPDTAANVSVTVPGVGSTTRGALPGMVTEAR DLRSEVIRQLNAAGKPASVATIAWMGYHPPPNPLDTGSAGDLWQTMTDGQAHAGAADLSRYLQQVRANNPSGHLTVLGHS YGSLTASLALQDLDAQSAHPVNDVVFYGSPGLELYSPAQLGLDHGHAYVMQAPHDLITNLVAPLAPLHGWGLDPYLTPGF TELSSQAGFDPGGIWRDGVYAHGDYPRSFLDAAGQPQLRMSGYNLAAIAAGLPDNTVGPPLLPPILGGGMPAAPGPALRG GR
Sequences:
>Translated_562_residues MPLTVADIDRWNAQAVREVFHAASARAEVTFEASRQLAALSIFANSGGKTAEAAAHHNAGIRRDLDAHGNEALAVARAAD RAADGIVKVQSELAALRHAAAAAELTIDALINRVVPIPGLRSTEAQWARTLAKQTELQAELDAIMAEANAVDEELASAVN MADGDAPIPADSGPPVGPEGLTPTQLASDANEERLREERARLQAHLERLQAEYDQLSVRAARDYHNGILDGDAVGRLAAL TDELSAARGRLGELDAVDEALSRAPETYLTQLQIPEDPNQQVLAAVAVGNPDTAANVSVTVPGVGSTTRGALPGMVTEAR DLRSEVIRQLNAAGKPASVATIAWMGYHPPPNPLDTGSAGDLWQTMTDGQAHAGAADLSRYLQQVRANNPSGHLTVLGHS YGSLTASLALQDLDAQSAHPVNDVVFYGSPGLELYSPAQLGLDHGHAYVMQAPHDLITNLVAPLAPLHGWGLDPYLTPGF TELSSQAGFDPGGIWRDGVYAHGDYPRSFLDAAGQPQLRMSGYNLAAIAAGLPDNTVGPPLLPPILGGGMPAAPGPALRG GR >Mature_561_residues PLTVADIDRWNAQAVREVFHAASARAEVTFEASRQLAALSIFANSGGKTAEAAAHHNAGIRRDLDAHGNEALAVARAADR AADGIVKVQSELAALRHAAAAAELTIDALINRVVPIPGLRSTEAQWARTLAKQTELQAELDAIMAEANAVDEELASAVNM ADGDAPIPADSGPPVGPEGLTPTQLASDANEERLREERARLQAHLERLQAEYDQLSVRAARDYHNGILDGDAVGRLAALT DELSAARGRLGELDAVDEALSRAPETYLTQLQIPEDPNQQVLAAVAVGNPDTAANVSVTVPGVGSTTRGALPGMVTEARD LRSEVIRQLNAAGKPASVATIAWMGYHPPPNPLDTGSAGDLWQTMTDGQAHAGAADLSRYLQQVRANNPSGHLTVLGHSY GSLTASLALQDLDAQSAHPVNDVVFYGSPGLELYSPAQLGLDHGHAYVMQAPHDLITNLVAPLAPLHGWGLDPYLTPGFT ELSSQAGFDPGGIWRDGVYAHGDYPRSFLDAAGQPQLRMSGYNLAAIAAGLPDNTVGPPLLPPILGGGMPAAPGPALRGG R
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010427 [H]
Pfam domain/function: PF06259 DUF1023 [H]
EC number: NA
Molecular weight: Translated: 58792; Mature: 58661
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLTVADIDRWNAQAVREVFHAASARAEVTFEASRQLAALSIFANSGGKTAEAAAHHNAG CCCEECCCCCCCHHHHHHHHHHHCCCCEEEEHHHHCEEEEEEEECCCCCCHHHHHHHCCC IRRDLDAHGNEALAVARAADRAADGIVKVQSELAALRHAAAAAELTIDALINRVVPIPGL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC RSTEAQWARTLAKQTELQAELDAIMAEANAVDEELASAVNMADGDAPIPADSGPPVGPEG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC LTPTQLASDANEERLREERARLQAHLERLQAEYDQLSVRAARDYHNGILDGDAVGRLAAL CCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH TDELSAARGRLGELDAVDEALSRAPETYLTQLQIPEDPNQQVLAAVAVGNPDTAANVSVT HHHHHHHHCCCCCHHHHHHHHHHCCHHHHHEEECCCCCCCEEEEEEEECCCCCCCEEEEE VPGVGSTTRGALPGMVTEARDLRSEVIRQLNAAGKPASVATIAWMGYHPPPNPLDTGSAG ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCC DLWQTMTDGQAHAGAADLSRYLQQVRANNPSGHLTVLGHSYGSLTASLALQDLDAQSAHP CHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCC VNDVVFYGSPGLELYSPAQLGLDHGHAYVMQAPHDLITNLVAPLAPLHGWGLDPYLTPGF CCCEEEECCCCCCEECHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCH TELSSQAGFDPGGIWRDGVYAHGDYPRSFLDAAGQPQLRMSGYNLAAIAAGLPDNTVGPP HHHHHHCCCCCCCCCCCCEEECCCCCHHHHCCCCCCCEEECCCCEEEEEECCCCCCCCCC LLPPILGGGMPAAPGPALRGGR CCHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure PLTVADIDRWNAQAVREVFHAASARAEVTFEASRQLAALSIFANSGGKTAEAAAHHNAG CCEECCCCCCCHHHHHHHHHHHCCCCEEEEHHHHCEEEEEEEECCCCCCHHHHHHHCCC IRRDLDAHGNEALAVARAADRAADGIVKVQSELAALRHAAAAAELTIDALINRVVPIPGL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC RSTEAQWARTLAKQTELQAELDAIMAEANAVDEELASAVNMADGDAPIPADSGPPVGPEG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC LTPTQLASDANEERLREERARLQAHLERLQAEYDQLSVRAARDYHNGILDGDAVGRLAAL CCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH TDELSAARGRLGELDAVDEALSRAPETYLTQLQIPEDPNQQVLAAVAVGNPDTAANVSVT HHHHHHHHCCCCCHHHHHHHHHHCCHHHHHEEECCCCCCCEEEEEEEECCCCCCCEEEEE VPGVGSTTRGALPGMVTEARDLRSEVIRQLNAAGKPASVATIAWMGYHPPPNPLDTGSAG ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCC DLWQTMTDGQAHAGAADLSRYLQQVRANNPSGHLTVLGHSYGSLTASLALQDLDAQSAHP CHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCC VNDVVFYGSPGLELYSPAQLGLDHGHAYVMQAPHDLITNLVAPLAPLHGWGLDPYLTPGF CCCEEEECCCCCCEECHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCH TELSSQAGFDPGGIWRDGVYAHGDYPRSFLDAAGQPQLRMSGYNLAAIAAGLPDNTVGPP HHHHHHCCCCCCCCCCCCEEECCCCCHHHHCCCCCCCEEECCCCEEEEEECCCCCCCCCC LLPPILGGGMPAAPGPALRGGR CCHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]