Definition | Mycobacterium tuberculosis F11, complete genome. |
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Accession | NC_009565 |
Length | 4,424,435 |
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The map label for this gene is 148823984
Identifier: 148823984
GI number: 148823984
Start: 3117011
End: 3117574
Strand: Reverse
Name: 148823984
Synonym: TBFG_12809
Alternate gene names: NA
Gene position: 3117574-3117011 (Counterclockwise)
Preceding gene: 148823985
Following gene: 148823983
Centisome position: 70.46
GC content: 66.49
Gene sequence:
>564_bases ATGCGGTGGCCGACGGCGTGGCTGCTGGCTCTGGTGTGTGTGATGGCGACTGGGTGCGGACCCAGTGGCCACGGGACGCG GGCCGGCGAGGAGGGGCCGTTGAGCCCGGAGAAGGTCGCCGAGCTGGAGAACCCGTTGCGCGCCAAGCCCCCGCTGGAGG ACGCCAAGGACCAGTACCGGGCGGCGGTGACCCAGCTGGCCAACGCCATCACGGCCCTGGTGCCCGGCCTGACGTGGCGA ACGGATATGGACACCTGGACCGGCTGCGGTGGTGAGTATGAATGGACCAGGGCCAAAGCGGCGTATTTCATGATCGTTTT CAGTGGACCGATCCCCGACGACAAGTGGCTGCAGGCCGTGCAGATCGTCAAGGACGGTGTCGAACAGTTCGGTGCCACCG GCTTTGGGGTGATGAAGAACAAGCCGGCCGACCACGACGTGTACTTCGCCGGTCATGGCGGCGTCGAGTTCAAATGCTCG ACCCAGAAGGCGGCGGTCCTCACCGCACAGTCGGACTGCCGGATCAGCCGGACCGACACCCCAAAACCCTCGCCGACCCC GTAG
Upstream 100 bases:
>100_bases CCGGGCTGCCCGACAACACGGTGGGCCCGCCGCTGCTTCCGCCAATTCTGGGTGGCGGCATGCCGGCAGCGCCCGGCCCA GCACTGAGAGGGGGACGTTG
Downstream 100 bases:
>100_bases CAGTTGGGCTAGGTTGGCCGAGCAGACGCAAAAGCCCCCATTTCGGGCCCGAAATGGGGGCTTTTGCGTCTGCTCACGCC GTAGCGGTTGGTCGAACTGG
Product: lipoprotein lppV
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MRWPTAWLLALVCVMATGCGPSGHGTRAGEEGPLSPEKVAELENPLRAKPPLEDAKDQYRAAVTQLANAITALVPGLTWR TDMDTWTGCGGEYEWTRAKAAYFMIVFSGPIPDDKWLQAVQIVKDGVEQFGATGFGVMKNKPADHDVYFAGHGGVEFKCS TQKAAVLTAQSDCRISRTDTPKPSPTP
Sequences:
>Translated_187_residues MRWPTAWLLALVCVMATGCGPSGHGTRAGEEGPLSPEKVAELENPLRAKPPLEDAKDQYRAAVTQLANAITALVPGLTWR TDMDTWTGCGGEYEWTRAKAAYFMIVFSGPIPDDKWLQAVQIVKDGVEQFGATGFGVMKNKPADHDVYFAGHGGVEFKCS TQKAAVLTAQSDCRISRTDTPKPSPTP >Mature_187_residues MRWPTAWLLALVCVMATGCGPSGHGTRAGEEGPLSPEKVAELENPLRAKPPLEDAKDQYRAAVTQLANAITALVPGLTWR TDMDTWTGCGGEYEWTRAKAAYFMIVFSGPIPDDKWLQAVQIVKDGVEQFGATGFGVMKNKPADHDVYFAGHGGVEFKCS TQKAAVLTAQSDCRISRTDTPKPSPTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20197; Mature: 20197
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWPTAWLLALVCVMATGCGPSGHGTRAGEEGPLSPEKVAELENPLRAKPPLEDAKDQYR CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHH AAVTQLANAITALVPGLTWRTDMDTWTGCGGEYEWTRAKAAYFMIVFSGPIPDDKWLQAV HHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCEECCEEEEEEEECCCCCCHHHHHHH QIVKDGVEQFGATGFGVMKNKPADHDVYFAGHGGVEFKCSTQKAAVLTAQSDCRISRTDT HHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCEEEEEECCCCEECCCCC PKPSPTP CCCCCCC >Mature Secondary Structure MRWPTAWLLALVCVMATGCGPSGHGTRAGEEGPLSPEKVAELENPLRAKPPLEDAKDQYR CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHH AAVTQLANAITALVPGLTWRTDMDTWTGCGGEYEWTRAKAAYFMIVFSGPIPDDKWLQAV HHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCEECCEEEEEEEECCCCCCHHHHHHH QIVKDGVEQFGATGFGVMKNKPADHDVYFAGHGGVEFKCSTQKAAVLTAQSDCRISRTDT HHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCEEEEEECCCCEECCCCC PKPSPTP CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA